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yash001010
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Parent(s):
93d2c31
Update app.py (#1)
Browse files- Update app.py (122a817fc3e71b709355262c7a64c37518c15c05)
app.py
CHANGED
@@ -4,6 +4,7 @@ from langchain_community.vectorstores import Chroma
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from langchain_community.embeddings import HuggingFaceBgeEmbeddings
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from groq import Groq
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from dotenv import load_dotenv
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# Initialize Streamlit page configuration
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st.set_page_config(page_title="Medical Knowledge Assistant", layout="wide")
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# Initialize the app
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st.title("Medical Knowledge Assistant")
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model_kwargs = {'device': 'cpu'}
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encode_kwargs = {'normalize_embeddings': False}
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embeddings = HuggingFaceBgeEmbeddings(
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model_name=model_name,
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model_kwargs=model_kwargs,
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encode_kwargs=encode_kwargs
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)
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st.
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with st.sidebar:
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st.write("API Key Loaded:", "Yes" if api_key else "No")
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persist_directory=persist_directory,
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embedding_function=embeddings
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)
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except Exception as e:
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st.error(f"Error loading vector store: {e}")
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# Initialize Groq client
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client = Groq(api_key=api_key)
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# Retrieve relevant documents
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docs = retriever.get_relevant_documents(query)
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context = "\n".join([doc.page_content for doc in docs])
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"role": "system",
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"content": (
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"You are a knowledgeable medical assistant. For any medical term or disease, include comprehensive information covering: "
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"definitions, types, historical background, major theories, known causes, and contributing risk factors. "
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"Explain the genesis or theories on its origin, if applicable. Use a structured, thorough approach and keep language accessible. "
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"provide symptoms, diagnosis, and treatment and post operative care , address all with indepth explanation , with specific details and step-by-step processes where relevant. "
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"If the context does not adequately cover the user's question, respond with: 'I cannot provide an answer based on the available medical dataset.'"
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)
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},
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{
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"role": "system",
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"content": (
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"If the user asks for a medical explanation, ensure accuracy, don't include layman's terms if complex terms are used, "
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"and organize responses in a structured way."
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)
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},
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{
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"role": "system",
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"content": (
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"When comparing two terms or conditions, provide a clear, concise, and structured comparison. Highlight key differences in their "
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"definitions, symptoms, causes, diagnoses, and treatments with indepth explanation of each. If relevant, include any overlapping characteristics."
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)
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},
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{
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"role": "user",
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"content": f"{context}\n\nQ: {query}\nA:"
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}
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],
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temperature=0.7,
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max_tokens=3000,
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stream=True
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)
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from langchain_community.embeddings import HuggingFaceBgeEmbeddings
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from groq import Groq
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from dotenv import load_dotenv
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import requests
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# Initialize Streamlit page configuration
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st.set_page_config(page_title="Medical Knowledge Assistant", layout="wide")
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# Initialize the app
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st.title("Medical Knowledge Assistant")
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# Google Drive file ID (use your own file ID)
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file_id = '1lVlF8dYsNFPzrNGqn7jiJos7qX49jmi0' # Replace with your Google Drive file ID
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destination_path = '/tmp/Embedded_Med_books' # Temporary location to store the vector store
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# Function to download file from Google Drive
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def download_from_drive(file_id, destination_path):
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"""Download the vector store file from Google Drive."""
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url = f'https://drive.google.com/uc?export=download&id={file_id}'
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response = requests.get(url)
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if response.status_code == 200:
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with open(destination_path, 'wb') as f:
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f.write(response.content)
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return destination_path
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else:
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st.error("Failed to download the file from Google Drive.")
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return None
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# Check if the vector store file exists, and download it if necessary
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if not os.path.exists(destination_path):
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st.warning("Downloading the vector store from Google Drive...")
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download_from_drive(file_id, destination_path)
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st.success("Vector store downloaded successfully!")
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# Set up embeddings
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model_name = "BAAI/bge-large-en"
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model_kwargs = {'device': 'cpu'}
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encode_kwargs = {'normalize_embeddings': False}
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embeddings = HuggingFaceBgeEmbeddings(
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model_name=model_name,
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model_kwargs=model_kwargs,
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encode_kwargs=encode_kwargs
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)
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# Load the vector store from the downloaded file
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vector_store = Chroma(
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persist_directory=destination_path,
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embedding_function=embeddings
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)
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retriever = vector_store.as_retriever(search_kwargs={'k': 1})
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# Initialize Groq client
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client = Groq(api_key=api_key)
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# Streamlit input
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query = st.text_input("Enter your medical question here:")
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def query_with_groq(query, retriever):
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try:
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# Retrieve relevant documents
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docs = retriever.get_relevant_documents(query)
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context = "\n".join([doc.page_content for doc in docs])
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# Call the Groq API with the query and context
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completion = client.chat.completions.create(
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model="llama3-70b-8192",
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messages=[
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{
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"role": "system",
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"content": (
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"You are a knowledgeable medical assistant. For any medical term or disease, include comprehensive information covering: "
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"definitions, types, historical background, major theories, known causes, and contributing risk factors. "
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"Explain the genesis or theories on its origin, if applicable. Use a structured, thorough approach and keep language accessible. "
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"provide symptoms, diagnosis, and treatment and post operative care , address all with indepth explanation , with specific details and step-by-step processes where relevant. "
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"If the context does not adequately cover the user's question, respond with: 'I cannot provide an answer based on the available medical dataset.'"
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)
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},
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{
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"role": "system",
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"content": (
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"If the user asks for a medical explanation, ensure accuracy, don't include layman's terms if complex terms are used, "
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"and organize responses in a structured way."
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)
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},
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{
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"role": "system",
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"content": (
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"When comparing two terms or conditions, provide a clear, concise, and structured comparison. Highlight key differences in their "
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"definitions, symptoms, causes, diagnoses, and treatments with indepth explanation of each. If relevant, include any overlapping characteristics."
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)
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},
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{
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"role": "user",
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"content": f"{context}\n\nQ: {query}\nA:"
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}
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],
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temperature=0.7,
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max_tokens=3000,
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stream=True
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)
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# Create a placeholder for streaming response
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response_container = st.empty()
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response = ""
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# Stream the response
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for chunk in completion:
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if chunk.choices[0].delta.content:
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response += chunk.choices[0].delta.content
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response_container.markdown(response)
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return response
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except Exception as e:
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st.error(f"Error during query processing: {str(e)}")
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return None
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if st.button("Get Answer"):
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if query:
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with st.spinner("Processing your query..."):
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answer = query_with_groq(query, retriever)
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if answer:
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st.success("Query processed successfully!")
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else:
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st.warning("Please enter a query.")
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