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# Copyright (c) Facebook, Inc. and its affiliates. All Rights Reserved.
"""Functions that handle saving and loading of checkpoints."""
import copy
import numpy as np
import os
import pickle
from collections import OrderedDict
import torch
from fvcore.common.file_io import PathManager
import timesformer.utils.distributed as du
import timesformer.utils.logging as logging
from timesformer.utils.c2_model_loading import get_name_convert_func
import torch.nn.functional as F
logger = logging.get_logger(__name__)
def make_checkpoint_dir(path_to_job):
"""
Creates the checkpoint directory (if not present already).
Args:
path_to_job (string): the path to the folder of the current job.
"""
checkpoint_dir = os.path.join(path_to_job, "checkpoints")
# Create the checkpoint dir from the master process
if du.is_master_proc() and not PathManager.exists(checkpoint_dir):
try:
PathManager.mkdirs(checkpoint_dir)
except Exception:
pass
return checkpoint_dir
def get_checkpoint_dir(path_to_job):
"""
Get path for storing checkpoints.
Args:
path_to_job (string): the path to the folder of the current job.
"""
return os.path.join(path_to_job, "checkpoints")
def get_path_to_checkpoint(path_to_job, epoch):
"""
Get the full path to a checkpoint file.
Args:
path_to_job (string): the path to the folder of the current job.
epoch (int): the number of epoch for the checkpoint.
"""
name = "checkpoint_epoch_{:05d}.pyth".format(epoch)
return os.path.join(get_checkpoint_dir(path_to_job), name)
def get_last_checkpoint(path_to_job):
"""
Get the last checkpoint from the checkpointing folder.
Args:
path_to_job (string): the path to the folder of the current job.
"""
d = get_checkpoint_dir(path_to_job)
names = PathManager.ls(d) if PathManager.exists(d) else []
names = [f for f in names if "checkpoint" in f]
assert len(names), "No checkpoints found in '{}'.".format(d)
# Sort the checkpoints by epoch.
name = sorted(names)[-1]
return os.path.join(d, name)
def has_checkpoint(path_to_job):
"""
Determines if the given directory contains a checkpoint.
Args:
path_to_job (string): the path to the folder of the current job.
"""
d = get_checkpoint_dir(path_to_job)
files = PathManager.ls(d) if PathManager.exists(d) else []
return any("checkpoint" in f for f in files)
def is_checkpoint_epoch(cfg, cur_epoch, multigrid_schedule=None):
"""
Determine if a checkpoint should be saved on current epoch.
Args:
cfg (CfgNode): configs to save.
cur_epoch (int): current number of epoch of the model.
multigrid_schedule (List): schedule for multigrid training.
"""
if cur_epoch + 1 == cfg.SOLVER.MAX_EPOCH:
return True
if multigrid_schedule is not None:
prev_epoch = 0
for s in multigrid_schedule:
if cur_epoch < s[-1]:
period = max(
(s[-1] - prev_epoch) // cfg.MULTIGRID.EVAL_FREQ + 1, 1
)
return (s[-1] - 1 - cur_epoch) % period == 0
prev_epoch = s[-1]
return (cur_epoch + 1) % cfg.TRAIN.CHECKPOINT_PERIOD == 0
def save_checkpoint(path_to_job, model, optimizer, epoch, cfg):
"""
Save a checkpoint.
Args:
model (model): model to save the weight to the checkpoint.
optimizer (optim): optimizer to save the historical state.
epoch (int): current number of epoch of the model.
cfg (CfgNode): configs to save.
"""
# Save checkpoints only from the master process.
if not du.is_master_proc(cfg.NUM_GPUS * cfg.NUM_SHARDS):
return
# Ensure that the checkpoint dir exists.
PathManager.mkdirs(get_checkpoint_dir(path_to_job))
# Omit the DDP wrapper in the multi-gpu setting.
sd = model.module.state_dict() if cfg.NUM_GPUS > 1 else model.state_dict()
normalized_sd = sub_to_normal_bn(sd)
# Record the state.
checkpoint = {
"epoch": epoch,
"model_state": normalized_sd,
"optimizer_state": optimizer.state_dict(),
"cfg": cfg.dump(),
}
# Write the checkpoint.
path_to_checkpoint = get_path_to_checkpoint(path_to_job, epoch + 1)
with PathManager.open(path_to_checkpoint, "wb") as f:
torch.save(checkpoint, f)
return path_to_checkpoint
def inflate_weight(state_dict_2d, state_dict_3d):
"""
Inflate 2D model weights in state_dict_2d to the 3D model weights in
state_dict_3d. The details can be found in:
Joao Carreira, and Andrew Zisserman.
"Quo vadis, action recognition? a new model and the kinetics dataset."
Args:
state_dict_2d (OrderedDict): a dict of parameters from a 2D model.
state_dict_3d (OrderedDict): a dict of parameters from a 3D model.
Returns:
state_dict_inflated (OrderedDict): a dict of inflated parameters.
"""
state_dict_inflated = OrderedDict()
#print(state_dict_2d.keys())
#print('----')
#print(state_dict_3d.keys())
for k, v2d in state_dict_2d.items():
assert k in state_dict_3d.keys()
v3d = state_dict_3d[k]
# Inflate the weight of 2D conv to 3D conv.
if len(v2d.shape) == 4 and len(v3d.shape) == 5:
logger.info(
"Inflate {}: {} -> {}: {}".format(k, v2d.shape, k, v3d.shape)
)
# Dimension need to be match.
try:
assert v2d.shape[-2:] == v3d.shape[-2:]
assert v2d.shape[:2] == v3d.shape[:2]
v3d = (
v2d.unsqueeze(2).repeat(1, 1, v3d.shape[2], 1, 1) / v3d.shape[2]
)
except: ### my modification
temp = (
v2d.unsqueeze(2).repeat(1, 1, v3d.shape[2], 1, 1) / v3d.shape[2]
)
v3d = torch.zeros(v3d.shape)
v3d[:,:v2d.shape[1],:,:,:] = temp
####################
elif v2d.shape == v3d.shape:
v3d = v2d
else:
logger.info(
"Unexpected {}: {} -|> {}: {}".format(
k, v2d.shape, k, v3d.shape
)
)
state_dict_inflated[k] = v3d.clone()
return state_dict_inflated
def load_checkpoint(
path_to_checkpoint,
model,
data_parallel=True,
optimizer=None,
inflation=False,
convert_from_caffe2=False,
epoch_reset=False,
clear_name_pattern=(),
):
"""
Load the checkpoint from the given file. If inflation is True, inflate the
2D Conv weights from the checkpoint to 3D Conv.
Args:
path_to_checkpoint (string): path to the checkpoint to load.
model (model): model to load the weights from the checkpoint.
data_parallel (bool): if true, model is wrapped by
torch.nn.parallel.DistributedDataParallel.
optimizer (optim): optimizer to load the historical state.
inflation (bool): if True, inflate the weights from the checkpoint.
convert_from_caffe2 (bool): if True, load the model from caffe2 and
convert it to pytorch.
epoch_reset (bool): if True, reset #train iterations from the checkpoint.
clear_name_pattern (string): if given, this (sub)string will be cleared
from a layer name if it can be matched.
Returns:
(int): the number of training epoch of the checkpoint.
"""
assert PathManager.exists(
path_to_checkpoint
), "Checkpoint '{}' not found".format(path_to_checkpoint)
logger.info("Loading network weights from {}.".format(path_to_checkpoint))
# Account for the DDP wrapper in the multi-gpu setting.
try:
ms = model.module if data_parallel else model
except:
ms = model
if convert_from_caffe2:
with PathManager.open(path_to_checkpoint, "rb") as f:
caffe2_checkpoint = pickle.load(f, encoding="latin1")
state_dict = OrderedDict()
name_convert_func = get_name_convert_func()
for key in caffe2_checkpoint["blobs"].keys():
converted_key = name_convert_func(key)
converted_key = c2_normal_to_sub_bn(converted_key, ms.state_dict())
if converted_key in ms.state_dict():
c2_blob_shape = caffe2_checkpoint["blobs"][key].shape
model_blob_shape = ms.state_dict()[converted_key].shape
# expand shape dims if they differ (eg for converting linear to conv params)
if len(c2_blob_shape) < len(model_blob_shape):
c2_blob_shape += (1,) * (
len(model_blob_shape) - len(c2_blob_shape)
)
caffe2_checkpoint["blobs"][key] = np.reshape(
caffe2_checkpoint["blobs"][key], c2_blob_shape
)
# Load BN stats to Sub-BN.
if (
len(model_blob_shape) == 1
and len(c2_blob_shape) == 1
and model_blob_shape[0] > c2_blob_shape[0]
and model_blob_shape[0] % c2_blob_shape[0] == 0
):
caffe2_checkpoint["blobs"][key] = np.concatenate(
[caffe2_checkpoint["blobs"][key]]
* (model_blob_shape[0] // c2_blob_shape[0])
)
c2_blob_shape = caffe2_checkpoint["blobs"][key].shape
if c2_blob_shape == tuple(model_blob_shape):
state_dict[converted_key] = torch.tensor(
caffe2_checkpoint["blobs"][key]
).clone()
logger.info(
"{}: {} => {}: {}".format(
key,
c2_blob_shape,
converted_key,
tuple(model_blob_shape),
)
)
else:
logger.warn(
"!! {}: {} does not match {}: {}".format(
key,
c2_blob_shape,
converted_key,
tuple(model_blob_shape),
)
)
else:
if not any(
prefix in key for prefix in ["momentum", "lr", "model_iter"]
):
logger.warn(
"!! {}: can not be converted, got {}".format(
key, converted_key
)
)
diff = set(ms.state_dict()) - set(state_dict)
diff = {d for d in diff if "num_batches_tracked" not in d}
if len(diff) > 0:
logger.warn("Not loaded {}".format(diff))
ms.load_state_dict(state_dict, strict=False)
epoch = -1
else:
# Load the checkpoint on CPU to avoid GPU mem spike.
with PathManager.open(path_to_checkpoint, "rb") as f:
checkpoint = torch.load(f, map_location="cpu")
try:
# if True:
model_state_dict_3d = (
model.module.state_dict() if data_parallel else model.state_dict()
)
checkpoint["model_state"] = normal_to_sub_bn(
checkpoint["model_state"], model_state_dict_3d
)
except:
model_state_dict_3d = model.state_dict()
checkpoint["model_state"] = normal_to_sub_bn(
checkpoint["model_state"], model_state_dict_3d
)
# except: ####### checkpoint from DEIT
# print(checkpoint.keys())
# model_state_dict_3d = model.state_dict()
# checkpoint["model_state"] = normal_to_sub_bn(
## checkpoint["model"], model_state_dict_3d
# checkpoint, model_state_dict_3d
# )
# keys = checkpoint['model_state'].keys()
# checkpoint['new_model_state'] = {}
# for key in keys:
# new_key = 'model.'+key
# checkpoint['new_model_state'][new_key] = checkpoint['model_state'][key]
# checkpoint['model_state'] = checkpoint['new_model_state']
# del checkpoint['new_model_state']
#
# ############
if inflation:
# Try to inflate the model.
inflated_model_dict = inflate_weight(
checkpoint["model_state"], model_state_dict_3d
)
ms.load_state_dict(inflated_model_dict, strict=False)
else:
if clear_name_pattern:
for item in clear_name_pattern:
model_state_dict_new = OrderedDict()
for k in checkpoint["model_state"]:
if item in k:
k_re = k.replace(item, "")
model_state_dict_new[k_re] = checkpoint[
"model_state"
][k]
logger.info("renaming: {} -> {}".format(k, k_re))
else:
model_state_dict_new[k] = checkpoint["model_state"][
k
]
checkpoint["model_state"] = model_state_dict_new
pre_train_dict = checkpoint["model_state"]
model_dict = ms.state_dict()
############
if 'model.time_embed' in pre_train_dict:
k = 'model.time_embed'
v = pre_train_dict[k]
v = v[0,:,:].unsqueeze(0).transpose(1,2)
new_v = F.interpolate(v, size=(model_dict[k].size(1)), mode='nearest')
pre_train_dict[k] = new_v.transpose(1,2)
###################
# Match pre-trained weights that have same shape as current model.
pre_train_dict_match = {
k: v
for k, v in pre_train_dict.items()
if k in model_dict and v.size() == model_dict[k].size()
}
# print(pre_train_dict.keys())
# print('-------------')
# print(model_dict.keys())
# print(pre_train_dict_match)
# print(xy)
# Weights that do not have match from the pre-trained model.
not_load_layers = [
k
for k in model_dict.keys()
if k not in pre_train_dict_match.keys()
]
# Log weights that are not loaded with the pre-trained weights.
if not_load_layers:
for k in not_load_layers:
logger.info("Network weights {} not loaded.".format(k))
# Load pre-trained weights.
ms.load_state_dict(pre_train_dict_match, strict=False)
epoch = -1
# Load the optimizer state (commonly not done when fine-tuning)
if "epoch" in checkpoint.keys() and not epoch_reset:
epoch = checkpoint["epoch"]
if optimizer:
optimizer.load_state_dict(checkpoint["optimizer_state"])
else:
epoch = -1
return epoch
def sub_to_normal_bn(sd):
"""
Convert the Sub-BN paprameters to normal BN parameters in a state dict.
There are two copies of BN layers in a Sub-BN implementation: `bn.bn` and
`bn.split_bn`. `bn.split_bn` is used during training and
"compute_precise_bn". Before saving or evaluation, its stats are copied to
`bn.bn`. We rename `bn.bn` to `bn` and store it to be consistent with normal
BN layers.
Args:
sd (OrderedDict): a dict of parameters whitch might contain Sub-BN
parameters.
Returns:
new_sd (OrderedDict): a dict with Sub-BN parameters reshaped to
normal parameters.
"""
new_sd = copy.deepcopy(sd)
modifications = [
("bn.bn.running_mean", "bn.running_mean"),
("bn.bn.running_var", "bn.running_var"),
("bn.split_bn.num_batches_tracked", "bn.num_batches_tracked"),
]
to_remove = ["bn.bn.", ".split_bn."]
for key in sd:
for before, after in modifications:
if key.endswith(before):
new_key = key.split(before)[0] + after
new_sd[new_key] = new_sd.pop(key)
for rm in to_remove:
if rm in key and key in new_sd:
del new_sd[key]
for key in new_sd:
if key.endswith("bn.weight") or key.endswith("bn.bias"):
if len(new_sd[key].size()) == 4:
assert all(d == 1 for d in new_sd[key].size()[1:])
new_sd[key] = new_sd[key][:, 0, 0, 0]
return new_sd
def c2_normal_to_sub_bn(key, model_keys):
"""
Convert BN parameters to Sub-BN parameters if model contains Sub-BNs.
Args:
key (OrderedDict): source dict of parameters.
mdoel_key (OrderedDict): target dict of parameters.
Returns:
new_sd (OrderedDict): converted dict of parameters.
"""
if "bn.running_" in key:
if key in model_keys:
return key
new_key = key.replace("bn.running_", "bn.split_bn.running_")
if new_key in model_keys:
return new_key
else:
return key
def normal_to_sub_bn(checkpoint_sd, model_sd):
"""
Convert BN parameters to Sub-BN parameters if model contains Sub-BNs.
Args:
checkpoint_sd (OrderedDict): source dict of parameters.
model_sd (OrderedDict): target dict of parameters.
Returns:
new_sd (OrderedDict): converted dict of parameters.
"""
for key in model_sd:
if key not in checkpoint_sd:
if "bn.split_bn." in key:
load_key = key.replace("bn.split_bn.", "bn.")
bn_key = key.replace("bn.split_bn.", "bn.bn.")
checkpoint_sd[key] = checkpoint_sd.pop(load_key)
checkpoint_sd[bn_key] = checkpoint_sd[key]
for key in model_sd:
if key in checkpoint_sd:
model_blob_shape = model_sd[key].shape
c2_blob_shape = checkpoint_sd[key].shape
if (
len(model_blob_shape) == 1
and len(c2_blob_shape) == 1
and model_blob_shape[0] > c2_blob_shape[0]
and model_blob_shape[0] % c2_blob_shape[0] == 0
):
before_shape = checkpoint_sd[key].shape
checkpoint_sd[key] = torch.cat(
[checkpoint_sd[key]]
* (model_blob_shape[0] // c2_blob_shape[0])
)
logger.info(
"{} {} -> {}".format(
key, before_shape, checkpoint_sd[key].shape
)
)
return checkpoint_sd
def load_test_checkpoint(cfg, model):
"""
Loading checkpoint logic for testing.
"""
# Load a checkpoint to test if applicable.
if cfg.TEST.CHECKPOINT_FILE_PATH != "":
# If no checkpoint found in MODEL_VIS.CHECKPOINT_FILE_PATH or in the current
# checkpoint folder, try to load checkpoint from
# TEST.CHECKPOINT_FILE_PATH and test it.
load_checkpoint(
cfg.TEST.CHECKPOINT_FILE_PATH,
model,
cfg.NUM_GPUS > 1,
None,
inflation=False,
convert_from_caffe2=cfg.TEST.CHECKPOINT_TYPE == "caffe2",
)
elif has_checkpoint(cfg.OUTPUT_DIR):
last_checkpoint = get_last_checkpoint(cfg.OUTPUT_DIR)
load_checkpoint(last_checkpoint, model, cfg.NUM_GPUS > 1)
elif cfg.TRAIN.CHECKPOINT_FILE_PATH != "":
# If no checkpoint found in TEST.CHECKPOINT_FILE_PATH or in the current
# checkpoint folder, try to load checkpoint from
# TRAIN.CHECKPOINT_FILE_PATH and test it.
load_checkpoint(
cfg.TRAIN.CHECKPOINT_FILE_PATH,
model,
cfg.NUM_GPUS > 1,
None,
inflation=False,
convert_from_caffe2=cfg.TRAIN.CHECKPOINT_TYPE == "caffe2",
)
else:
logger.info(
"Unknown way of loading checkpoint. Using with random initialization, only for debugging."
)
def load_train_checkpoint(cfg, model, optimizer):
"""
Loading checkpoint logic for training.
"""
if cfg.TRAIN.AUTO_RESUME and has_checkpoint(cfg.OUTPUT_DIR):
last_checkpoint = get_last_checkpoint(cfg.OUTPUT_DIR)
logger.info("Load from last checkpoint, {}.".format(last_checkpoint))
checkpoint_epoch = load_checkpoint(
last_checkpoint, model, cfg.NUM_GPUS > 1, optimizer
)
start_epoch = checkpoint_epoch + 1
elif cfg.TRAIN.CHECKPOINT_FILE_PATH != "":
logger.info("Load from given checkpoint file.")
checkpoint_epoch = load_checkpoint(
cfg.TRAIN.CHECKPOINT_FILE_PATH,
model,
cfg.NUM_GPUS > 1,
optimizer,
inflation=cfg.TRAIN.CHECKPOINT_INFLATE,
convert_from_caffe2=cfg.TRAIN.CHECKPOINT_TYPE == "caffe2",
epoch_reset=cfg.TRAIN.CHECKPOINT_EPOCH_RESET,
clear_name_pattern=cfg.TRAIN.CHECKPOINT_CLEAR_NAME_PATTERN,
)
start_epoch = checkpoint_epoch + 1
else:
start_epoch = 0
return start_epoch