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livermask

Commit History

improved download logic to catch incomplete downloads
95addbb

andreped commited on

added github release download for parenchyma model
9b6cb7b

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refactored [no ci]
23437a1

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refactored to PEP8
3120fa9

andreped commited on

refactored setup.py [no ci]
47dd310

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bump gdown
bb647c1

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disable macOS build with miniconda for now
caa96fc

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python3 for macOS build
0221a28

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added some debug prompts
6df05bf

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run conda checks for all operating systems
bd25020

andreped commited on

refactor [no ci]
f3a8499

andreped commited on

improved README header [no ci]
be00ed0

andreped commited on

build wheel on ubuntu 20.04
2170ae2

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missing indent
db74e25

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refactored CI
0925325

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conda compatibility update
cb1b3ee

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conda build needs 'build'
9dbc15d

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added conda CI test
fe33db4

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ignore .idea/
51aa4f5

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updated gdown all places
5bbb56a

andreped commited on

tried to remove md5 for parenchyma model
24aa3bf

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Use gdown==3.13.0 in CI
9e5aacd

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added download badges
be760a8

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bumped version and added info on CuPy
2e6fa2b

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bump version
9a14166

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tries to ignore
f082d09

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something weird with the reader
74d57ef

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another test
d222d16

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two encoding bugs actually
0fe6911

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some encoding issue with reader, tried to use 'rb' and move decoding to later
6bede5f

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changed encoding
94deb45

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Merge branch 'master' of https://github.com/andreped/livermask into master
78277a4

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added alternative install method - from source from github repo
c1032b4

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Update README.md
092bbd9

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livermask is now on pypi - updated README
29ee7d6

andreped commited on

added setup config file
d5c7d5a

andreped commited on

Update README.md
b58966c

andreped commited on

updated version in README
beb0fde

andreped commited on

Update README.md
8723c23

andreped commited on

filtered predicted vessels outside the predicted liver parenchyma region
8988f76

andreped commited on

changed tqdm for vessel seg for consistency
0db97df

andreped commited on

Merge branch 'master' of https://github.com/andreped/livermask into master
b172cc5

andreped commited on

run batch mode workflow instead
ab34839

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Update README.md
62d753f

andreped commited on

inference workflow runs successfully across all operating systems. Added --vessels to test chainer on the cloud
b83b063

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wrong path
33e217b

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updated version. Added inference test
a34dd73

andreped commited on

mp fix
31605b7

andreped commited on

potential multiprocessing fix for macos
7c205cc

andreped commited on

fix for chainer inference when cupy is not installed and cpu is not specific
224e8c1

andreped commited on