refactoring, adding informative prints for liver vessel segmentation in log, which supports verbose mode b437043 andreped commited on Dec 10, 2021
finally working. Now the CLI properly installs using pip and it can be used without any dependency issues across all relevant operating systems d1ff5ab andreped commited on Dec 10, 2021
test removed package, which already was added as python module instead 41a6984 andreped commited on Dec 10, 2021
added install argument to set which cupy version to install livermask with 0cee8e2 andreped commited on Dec 10, 2021
started setting up install option for pip, but will likely remove as it may not be possible to generalize that easily... 33f590f andreped commited on Dec 10, 2021
removed redundant file (vessels model), which is downloaded on the fly 22bb760 andreped commited on Dec 10, 2021
Added option to segment the portal and hepatic veins (one class). Liver segmentation is now run in a separate Process, as TF is unable to clear the GPU manually - only when a session is killed, which is only when a Process is finished/killed. 362a9f8 andreped commited on Dec 10, 2021
typo fix '.ini' instead of '.nii'. Also fixed casting to reduce memory usage 841a460 andreped commited on Oct 22, 2021