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livermask

Commit History

refactor [no ci]
f3a8499

andreped commited on

improved README header [no ci]
be00ed0

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build wheel on ubuntu 20.04
2170ae2

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missing indent
db74e25

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refactored CI
0925325

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conda compatibility update
cb1b3ee

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conda build needs 'build'
9dbc15d

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added conda CI test
fe33db4

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ignore .idea/
51aa4f5

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updated gdown all places
5bbb56a

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tried to remove md5 for parenchyma model
24aa3bf

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Use gdown==3.13.0 in CI
9e5aacd

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added download badges
be760a8

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bumped version and added info on CuPy
2e6fa2b

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bump version
9a14166

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tries to ignore
f082d09

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something weird with the reader
74d57ef

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another test
d222d16

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two encoding bugs actually
0fe6911

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some encoding issue with reader, tried to use 'rb' and move decoding to later
6bede5f

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changed encoding
94deb45

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Merge branch 'master' of https://github.com/andreped/livermask into master
78277a4

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added alternative install method - from source from github repo
c1032b4

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Update README.md
092bbd9

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livermask is now on pypi - updated README
29ee7d6

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added setup config file
d5c7d5a

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Update README.md
b58966c

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updated version in README
beb0fde

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Update README.md
8723c23

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filtered predicted vessels outside the predicted liver parenchyma region
8988f76

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changed tqdm for vessel seg for consistency
0db97df

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Merge branch 'master' of https://github.com/andreped/livermask into master
b172cc5

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run batch mode workflow instead
ab34839

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Update README.md
62d753f

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inference workflow runs successfully across all operating systems. Added --vessels to test chainer on the cloud
b83b063

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wrong path
33e217b

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updated version. Added inference test
a34dd73

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mp fix
31605b7

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potential multiprocessing fix for macos
7c205cc

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fix for chainer inference when cupy is not installed and cpu is not specific
224e8c1

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working solution
f7fc178

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typo
68ecff8

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potential fix for path
f0851c4

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tried recursive include
b9333e5

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tried adding flag to fix setup
04d66c8

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typo
79b2527

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added manifest file to include yml file
cdf34fa

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added missing dependency
fd92dd1

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fix for deadlock issue on macOSX
9f563e6

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Update README.md
99a9d35

andreped commited on