andreped commited on
Commit
d46f53d
1 Parent(s): 6209ec6

Fix attempt at model download into container

Browse files
Files changed (2) hide show
  1. .dockerignore +2 -0
  2. Dockerfile +4 -3
.dockerignore CHANGED
@@ -3,6 +3,8 @@ build/
3
  dist/
4
  livermask.egg-info/
5
  *.DS_Store
 
 
6
  *.nii
7
  *__pycache__/
8
  .idea/
 
3
  dist/
4
  livermask.egg-info/
5
  *.DS_Store
6
+ *.h5
7
+ *.npz
8
  *.nii
9
  *__pycache__/
10
  .idea/
Dockerfile CHANGED
@@ -32,9 +32,7 @@ RUN python3.7 -m pip install --force-reinstall typing_extensions==4.0.0
32
  # Install wget
33
  RUN apt install wget -y
34
 
35
- # Download pretrained parenchyma model
36
- RUN wget "https://github.com/andreped/livermask/releases/download/trained-models-v1/model.h5"
37
- COPY --chown=user ./model.h5 /code/model.h5
38
 
39
  # Set up a new user named "user" with user ID 1000
40
  RUN useradd -m -u 1000 user
@@ -52,4 +50,7 @@ WORKDIR $HOME/app
52
  # Copy the current directory contents into the container at $HOME/app setting the owner to the user
53
  COPY --chown=user . $HOME/app
54
 
 
 
 
55
  CMD ["python3.7", "demo/app.py"]
 
32
  # Install wget
33
  RUN apt install wget -y
34
 
35
+ RUN ls -la
 
 
36
 
37
  # Set up a new user named "user" with user ID 1000
38
  RUN useradd -m -u 1000 user
 
50
  # Copy the current directory contents into the container at $HOME/app setting the owner to the user
51
  COPY --chown=user . $HOME/app
52
 
53
+ # Download pretrained parenchyma model
54
+ RUN wget "https://github.com/andreped/livermask/releases/download/trained-models-v1/model.h5"
55
+
56
  CMD ["python3.7", "demo/app.py"]