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Running
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CPU Upgrade
Running
on
CPU Upgrade
Andrew Stirn
commited on
Commit
·
6216d88
1
Parent(s):
e0618e1
missed fix
Browse files
tiger.py
CHANGED
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@@ -35,7 +35,7 @@ def load_transcripts(fasta_files):
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with gzip.open(file, 'rt') as f:
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df = pd.DataFrame([(t.id, str(t.seq)) for t in SeqIO.parse(f, 'fasta')], columns=['id', 'seq'])
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else:
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-
df = pd.DataFrame([(t.id, str(t.seq)) for t in SeqIO.parse(
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except Exception as e:
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print(e, 'while loading', file)
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continue
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with gzip.open(file, 'rt') as f:
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df = pd.DataFrame([(t.id, str(t.seq)) for t in SeqIO.parse(f, 'fasta')], columns=['id', 'seq'])
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else:
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+
df = pd.DataFrame([(t.id, str(t.seq)) for t in SeqIO.parse(file, 'fasta')], columns=['id', 'seq'])
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except Exception as e:
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print(e, 'while loading', file)
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continue
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