Hugging Face's logo

Spaces:
KalbeDigitalLab
/
PathologyNucleiClassification
Build error

App Files Community
2
PathologyNucleiClassification / Description.md
fadindashfr
initial commit all file
4c5329d
preview code
|
raw
history blame
817 Bytes

Overview

Nuclei classification within Haematoxylin & Eosi stained histology images. Classifying nuclei cells as the following types:

  • Other
  • Inflammatory
  • Epithelial
  • Spindle-Shaped

References: https://doi.org/10.1016/j.media.2019.101563

Dataset

The model is trained with Colorectal Nuclear Segmentation and Phenotypes (CoNSeP) dataset https://warwick.ac.uk/fac/cross_fac/tia/data/hovernet. Images were extracted from 16 colorectal adenocarcinoma (CRA) WSIs.

  • Target: Nuclei
  • Task: Nuclei Cells Class Classification
  • Modality: Image (RGB)

Model Architecture

The model is trained using DenseNet121 over CoNSep dataset. alt text

Demo

Please select or upload a nuclei histology image and label image to see Nuclei Cells Classification capabilities of this model