Downloading data
We aim to show a very quick overview on how you can download data with idc_index a python package developed by the IDC team to help with basic operations on IDC data.
Learn more @ https://github.com/ImagingDataCommons/idc-index
Detailed Tutorial @ https://github.com/ImagingDataCommons/IDC-Tutorials/blob/master/notebooks/getting_started/part2_searching_basics.ipynb
Download idc-index package
pip install --upgrade idc-index
Import module and initialize client
from idc_index import index
client = index.IDCClient()
Download data
client.download_from_selection(
seriesInstanceUID='<enter your seriesInstanceUID or list of seriesInstanceUIDs>',
downloadDir= '<Download destination folder>' )
Below are a couple of examples:
Example 1:
client.download_from_selection(
seriesInstanceUID='1.2.276.0.7230010.3.1.3.313263360.15851.1706325185.577017',
downloadDir= 'idc_data' )
Example 2:
client.download_from_selection(
seriesInstanceUID=['1.2.276.0.7230010.3.1.3.313263360.15851.1706325185.577017',
'1.2.840.113654.2.55.257926562693607663865369179341285235858'
],
downloadDir= 'idc_data' )