unibiomap_demo / README.md
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metadata
title: UniBioMap Explorer
emoji: πŸ“Š
colorFrom: blue
colorTo: pink
sdk: gradio
sdk_version: 5.23.1
app_file: app.py
pinned: false

UniBioMap Demo

Open in Hugging Face Open In Colab Open In GitHub

πŸ“Š This demo demonstrates sampling and visualizing subgraphs from current compiled UniBioMap based on specific entities (sets).

Usage

  • We have released the Gradio based demo on [Hugging Face](https://huggingface.co/spaces/EZ4Fanta/unibiomap_demo), please click the button to use the WebUI online.
  • If you want to use the WebUI locally, please run:
    python app.py
    
    or if you want further modification:
    gradio app.py
    
  • If you just want to compile the networkx graph image and entity .txt file, Simply following the steps in demo.ipynb. Or you can run the demo on Google Colab.

Requirements

  1. Clone the repository:

    git clone https://github.com/yourusername/unibiomap-demo.git
    cd unibiomap-demo
    
  2. Install the required packages:

    pip install --upgrade gradio
    pip install -r requirements.txt