monsoon-nlp/mamba130-proteinpretrain-quinoa

README.md

@@ -0,0 +1,48 @@
+---
+base_model: state-spaces/mamba-130m-hf
+tags:
+- generated_from_trainer
+model-index:
+- name: trainer
+  results: []
+---
+
+<!-- This model card has been generated automatically according to the information the Trainer had access to. You
+should probably proofread and complete it, then remove this comment. -->
+
+# trainer
+
+This model is a fine-tuned version of [state-spaces/mamba-130m-hf](https://huggingface.co/state-spaces/mamba-130m-hf) on an unknown dataset.
+
+## Model description
+
+More information needed
+
+## Intended uses & limitations
+
+More information needed
+
+## Training and evaluation data
+
+More information needed
+
+## Training procedure
+
+### Training hyperparameters
+
+The following hyperparameters were used during training:
+- learning_rate: 5e-05
+- train_batch_size: 3
+- eval_batch_size: 8
+- seed: 42
+- optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
+- lr_scheduler_type: linear
+- num_epochs: 1
+- mixed_precision_training: Native AMP
+
+### Framework versions
+
+- Transformers 4.40.0.dev0
+- Pytorch 2.2.1+cu121
+- Datasets 2.18.0
+- Tokenizers 0.15.2

config.json

@@ -0,0 +1,40 @@
+{
+  "_name_or_path": "state-spaces/mamba-130m-hf",
+  "architectures": [
+    "MambaForCausalLM"
+  ],
+  "bos_token_id": 0,
+  "conv_kernel": 4,
+  "d_inner": 1536,
+  "d_model": 768,
+  "eos_token_id": 0,
+  "expand": 2,
+  "fused_add_norm": true,
+  "hidden_act": "silu",
+  "hidden_size": 768,
+  "initializer_range": 0.1,
+  "intermediate_size": 1536,
+  "layer_norm_epsilon": 1e-05,
+  "model_type": "mamba",
+  "n_layer": 24,
+  "num_hidden_layers": 24,
+  "pad_token_id": 0,
+  "pad_vocab_size_multiple": 8,
+  "rescale_prenorm_residual": false,
+  "residual_in_fp32": true,
+  "rms_norm": true,
+  "ssm_cfg": {},
+  "state_size": 16,
+  "time_step_floor": 0.0001,
+  "time_step_init_scheme": "random",
+  "time_step_max": 0.1,
+  "time_step_min": 0.001,
+  "time_step_rank": 48,
+  "time_step_scale": 1.0,
+  "torch_dtype": "float32",
+  "transformers_version": "4.40.0.dev0",
+  "use_bias": false,
+  "use_cache": true,
+  "use_conv_bias": true,
+  "vocab_size": 50280
+}

generation_config.json

@@ -0,0 +1,7 @@
+{
+  "_from_model_config": true,
+  "bos_token_id": 0,
+  "eos_token_id": 0,
+  "pad_token_id": 0,
+  "transformers_version": "4.40.0.dev0"
+}

model.safetensors

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:81e5982ed42503486baa4db846a644c0c622b54465b5fd90ebdb60ba1ead27dc
+size 516567560

runs/Apr04_16-36-53_99ddc2585cd1/events.out.tfevents.1712248614.99ddc2585cd1.2552.0

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:5ac84905d33131f53f97aafa67adaab7749f6f21206f2997ccdc71d19c91b120
+size 5118

special_tokens_map.json

@@ -0,0 +1,30 @@
+{
+  "bos_token": {
+    "content": "<|endoftext|>",
+    "lstrip": false,
+    "normalized": false,
+    "rstrip": false,
+    "single_word": false
+  },
+  "eos_token": {
+    "content": "<|endoftext|>",
+    "lstrip": false,
+    "normalized": false,
+    "rstrip": false,
+    "single_word": false
+  },
+  "pad_token": {
+    "content": "<|endoftext|>",
+    "lstrip": false,
+    "normalized": false,
+    "rstrip": false,
+    "single_word": false
+  },
+  "unk_token": {
+    "content": "<|endoftext|>",
+    "lstrip": false,
+    "normalized": false,
+    "rstrip": false,
+    "single_word": false
+  }
+}

tokenizer_config.json

@@ -0,0 +1,216 @@
+{
+  "add_prefix_space": false,
+  "added_tokens_decoder": {
+    "0": {
+      "content": "<|endoftext|>",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "1": {
+      "content": "<|padding|>",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "50254": {
+      "content": "                        ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50255": {
+      "content": "                       ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50256": {
+      "content": "                      ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50257": {
+      "content": "                     ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50258": {
+      "content": "                    ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50259": {
+      "content": "                   ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50260": {
+      "content": "                  ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50261": {
+      "content": "                 ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50262": {
+      "content": "                ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50263": {
+      "content": "               ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50264": {
+      "content": "              ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50265": {
+      "content": "             ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50266": {
+      "content": "            ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50267": {
+      "content": "           ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50268": {
+      "content": "          ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50269": {
+      "content": "         ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50270": {
+      "content": "        ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50271": {
+      "content": "       ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50272": {
+      "content": "      ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50273": {
+      "content": "     ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50274": {
+      "content": "    ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50275": {
+      "content": "   ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    },
+    "50276": {
+      "content": "  ",
+      "lstrip": false,
+      "normalized": true,
+      "rstrip": false,
+      "single_word": false,
+      "special": false
+    }
+  },
+  "bos_token": "<|endoftext|>",
+  "clean_up_tokenization_spaces": true,
+  "eos_token": "<|endoftext|>",
+  "max_length": 1024,
+  "model_max_length": 1000000000000000019884624838656,
+  "pad_token": "<|endoftext|>",
+  "stride": 0,
+  "tokenizer_class": "GPTNeoXTokenizer",
+  "truncation_side": "right",
+  "truncation_strategy": "longest_first",
+  "unk_token": "<|endoftext|>"
+}

training_args.bin

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:8284f64501881aafbecba5d239bb84140edd5978b2bb79ad5fbae78d97757123
+size 4920