【马祖鸟类列表】
马祖岛屿因地处中国大陆边缘，鸟类分布接近中国大陆华南地区，有别于台湾。且因列岛位居中国大陆弧形沿岸中段，是迁移性候鸟南来北返的中继站，其中鸥科夏候鸟类为数众多，在2000年时更发现了「神话之鸟」黑嘴端凤头燕鸥，引起国际关注。
根据近年来累计调查结果显示，马祖地区的鸟类计有20目56科286种，其中留鸟16种占百分之6，冬候鸟31种占百分之11，夏候鸟14种占百分之5，过境鸟222种占百分之78，迷鸟1种，外来种2种。显示马祖地区鸟类的组成，迁移性的候鸟是其主要的族群。
== 鸻形目 Charadriiformes ==
* 燕鸥科 Sternidae
# 黑嘴端凤头燕鸥 - T. bernsteini
# 大凤头燕鸥 - Thalasseus bergii
# 红燕鸥 - Sterna dougallii
== 鸥形目 Lariformes ==
* 鸥科 Laridae
# 苍燕鸥 - Sterna sumatrana
# 银鸥 - Larus argentatus
# 黑尾鸥 - Larus crassirostris
# 玄燕鸥 - Anous stolidus
# 小燕鸥 - Sterna albifrons
# 白眉燕鸥 - Sterna anaethetus
== 隼形目 Falconiformes ==
* 鹰科 Accipitridae
# 𫛭 - Buteo buteo ( Eurasian Buzzard)
# 赤腹鹰 - Accipiter soloensis ( Chinese Goshawk)
# 灰面𫛭鹰 (灰面鹫) - Butastur indicus ( Gray-faced Buzzard)
# 日本松雀鹰 - Accipiter gularis ( Japanese Sparrow Hawk)
* 隼科 Falconidae
# 燕隼 - Falco subbuteo ( Eurasian Hobby)
# 红隼 - Falco tinnunculus ( Eurasian Kestrel)
== 潜鸟目 Gaviiformes ==
* 潜鸟科 Gaviidae
# 红喉潜鸟 - Gavia stellata ( Red-throated Diver)
== 𬸯鷈目 Podicipediformes ==
* 𬸯鷈科 Podicipedidae
# 小𬸯鷈 - Tachybaptus ruficollis ( Little Grebe)
# 黑颈𬸯鷈 - Podiceps nigricollis ( Eared Grebe)
== 鹱形目 Procellariiformes ==
* 鹱科 Diomedeidae
# 白额鹱 - Puffinus leucomelas
# 短尾鹱 - Puffinus tenuirostris
== 鹈形目 Pelecaniformes ==
* 军舰鸟科 Fregatidae
# 白斑军舰鸟 - Fregata ariel ( Lesser Frigate Bird)
* 鸬鹚科 Phalacrocoracidae
# 青背鸬鹚(丹氏鸬鹚) - Phalacrocorax capillatus ( Japanese Cormorant)
# 大鸬鹚
== 鹳形目 Ciconiiformes ==
* 鹭科 Ardeidae
# 牛背鹭 - Bubulcus ibis
# 中白鹭 - Egretta intermedia ( Intermediate Egret)
# 黄小鹭 - Ixobrychus sinensis ( Yellow Bittern)
# 苍鹭 - Ardea cinerea ( Grey Heron)
# 绿鹭 - Butorides striatus
# 池鹭 - Ardeola bacchus ( Chinese Pond Heron)
# 岩鹭 - Egretta sacra ( Pacific Reef Egret)
# 夜鹭 Nycticorax nycticorax ( Black-crowned Night Heron)
# 麻鹭 - Gorsachius goisagi
== 雁形目 Anseriformes ==
* 雁鸭科 Anatidae
# 小水鸭 - Anas crecca ( Green-winged Teal)
# 赤颈鸭 - Anas penelope ( Eurasian Wigeon)
# 花嘴鸭 - Anas poecilorhyncha ( Spot-billed Duck)
# 白眉鸭 - Anas querquedula (Garganey)
# 鸳鸯 - Aix galericulata ( Mandarin Duck)
== 鹤形目 Gruiformes ==
* 秧鸡科 Rallidae
# 董鸡 - Gallicrex cinerea ( Watercock)
# 白腹秧鸡 - Amaurornis phoenicurus ( White-breasted Waterhen)
# 红脚秧鸡 - Rallina fasciata ( Red-legged Crake)
== 鸡形目 Galliformes ==
* 雉科 Phasianidae
# 鹌鹑 - Coturnix japonica ( Japanese Quail)
== 鸻形目 Charadriiformes ==
* 水雉科 Jacanidae
# 水雉 - Hydrophasianus chirurgus ( Pheasant-tailed Jacana)
* 蛎鸻科 Haematopodidae
# 蛎鸻 - Haematopus ostralegus ( Eurasian Oystercatcher)
* 鸻科 Charadriidae
# 灰斑鸻 - Pluvialis squatarola ( Grey Plover)
# 铁嘴沙鸻 - Charadrius leschenaultii ( Great Sand Plover)
# 太平洋金斑鸻 - Pluvialis fulva ( Pacific Golden Plover)
# 小环颈鸻 - Charadrius dubius ( Little Ringed Plover)
# 东方环颈鸻 - Charadrius alexandrinus ( Kentish Plover)
# 东方红胸鸻 - Charadrius veredus
# 灰头麦鸡(跳鸻) - Vanellus cinereus ( Grey-headed Lapwing)
# 凤头麦鸡(小辫鸻) - Vanellus vanellus ( Northern Lapwing)
# 东方燕鸻
* 鹬科 Scolopacidae
# 山鹬 - Scolopax rusticola ( Eurasian Woodcock)
# 矶鹬 - Actitis hypoleucos ( Common Sandpiper)
# 田鹬(扇尾沙锥) - Gallinago gallinago ( Common Snipe)
# 小杓鹬 - Numenius minutus ( Little Curlew)
# 大滨鹬 (姥鹬) - Calidris tenuirostris ( Great Knot)
# 黑腹滨鹬 (滨鹬) - Calidris alpina ( Dunlin)
# 红胸滨鹬 (穉鹬) - Calidris ruficollis ( Rufous-necked Sandpiper)
# 白腰草鹬 - Tringa ochropus ( Green Sandpiper)
# 黄足鹬(灰尾鹬) - Heteroscelus brevipes ( Gray-tailed Tattler)
# 三趾滨鹬 (三趾鹬) - Calidris alba ( Sanderling)
* 瓣足鹬科 Phalaropodidae
# 红领瓣足鹬 - Phalaropus lobatus ( Red-necked Phalarope)
== 佛法僧目 Coraciiformes ==
* 翠鸟科 Alcedinidae
# 普通翠鸟 - Alcedo atthis ( Common Kingfisher)
# 白喉翡翠 - Halcyon smyrnensis ( White-throated Kingfisher)
* 佛法僧科 Coraciidae
# 佛法僧(三宝鸟) - Eurystomus orientalis ( Dollarbird)
== 鸽形目 Columbiformes ==
* 鸠鸽科 Columbidae
# 红斑鸠 - Streptopelia tranquebarica ( Red Turtle Dove)
# 珠颈斑鸠 - Streptopelia chinensis formosa (Kuroda, 1927) ( Spotted Dove)
# 金背斑鸠 - Streptopelia orientalis orii Yamashina, 1932 ( Oriental Turtle Dove)
== 戴胜目 Upupiformes ==
* 戴胜科 Upupidae
# 戴胜 - Upupa epops ( Eurasian Hoopoe)
== 雨燕目 Apodiformes ==
* 雨燕科 Apodidae
# 叉尾雨燕 - Apus pacificus ( Fork-tailed swift)
== 雀形目 Passeriformes ==
* 燕科 Hirundinidae
# 家燕 - Hirundo rustica ( Barn Swallow)
# 金腰燕 - Hirundo daurica ( Red-rumped Swallow)
* 黄鹂科 Oriolidae
# 黑枕黄鹂 - Oriolus chinensis ( Black-naped Oriole)
* 鸦科 Corvidae
# 小嘴乌鸦 - Corvus corone ( Carrion Crow)
* 百灵科 Alaudidae
# 云雀 - Alauda arvensis
* 鹡鸰科 Motacillidae
# 树鹨 - Anthus hodgsoni ( Olive-backed Tree Pipit)
# 田鹨 - Anthus novaeseelandiae
# 水鹨 - Anthus spinoletta ( American Pipit)
# 赤喉鹨 - Anthus cervinus ( Red-throated Pipit)
# 白背鹨 - Anthus gustavi ( Petchora Pipit)
# 白鹡鸰 - Motacilla alba ( White Wagtail)
# 灰鹡鸰 - Motacilla cinerea ( Grey Wagtail)
# 黄鹡鸰 - Motacilla flava ( Yellow Wagtail)
# 山鹡鸰 - Dendronanthus indicus ( Forest Wagtail)
* 山椒鸟科 Campephagidae
# 暗灰鹃鵙(黑翅山椒鸟) - Coracina melaschistos ( Dark-grey Cuckoo Shrike)
* 鹎科 Pycnonotidae
# 白头鹎(白头翁) - Pycnonotus sinensis formosae Hartert, 1910 ( Light-vented Bulbul)
* 绣眼科 Zosteropidae
# 绿绣眼 - Zosterops japonicus ( Japanese White-eye)
* 伯劳科 Laniidae
# 红头伯劳 - Lanius bucephalus ( Bull-headed Shrike)
# 红尾伯劳 - Lanius cristatus ( Brown Shrike)
# 棕背伯劳 - Lanius schach formosae  Swinhoe, 1863 ( Long-tailed Shrike)
* 鹟科 Muscicapidae
# 宽嘴鹟 - Muscicapa dauurica ( Asian Brown Flycatcher)
# 灰斑鹟 - Muscicapa griseisticta ( Gray-spotted Flycatcher)
# 赤颈鸫 - Turdus ruficollis
# 白斑紫啸鸫 - Myophonus caeruleus
# 漠䳭 - Oenanthe deserti ( Desert Wheatear)
# 红尾水鸲 - Phoenicurus fuliginosus affinis Ogilvie-Grant
# 白顶溪鸲 - Chaimarrornis leucocephalus
# 灰林鸲 - Saxicola ferrea
# 黑喉鸲 - Saxicola torquatus
# 北红尾鸲 - Muscicapa ferruginea
* 雀科 Fringillidae
# 花雀 - Fringilla montifringilla ( Brambling)
# 金翅雀 - Carduelis sinica ( Oriental Greenfinch)
# 红脇蓝尾鸲 - Tarsiger cyanurus
# 小桑鸤 - Eophona migratoria ( Yellow-billed Grosbeak)
* 梅花雀科 Estrildidae
# 斑文鸟 - Lonchura punctulata ( Nutmeg Mannikin Munia)
# 麻雀 - Passer montanus ( Eurasian Tree Sparrow)
* 鸫科 Turdidae
# 乌鸫 - Turdus merula ( Eurasian Blackbird)
# 蓝矶鸫 - Monticola solitarius ( Blue Rock Thrush)
# 斑点鸫 - Turdus naumanni ( Dusky Thrush)
# 白眉鸫 - Turdus obscurus ( Eyebrowed Thrush)
# 白腹鸫 - Turdus pallidus ( Pale Thrush)
# 虎斑地鸫 - Zoothera dauma ( Scaly Thrush)
# 鹊鸲 - Copsyshus saularis ( Oriental Magpie-robin)
* 莺科 Sylviidae
# 极北柳莺 - Phylloscopus borealis ( Arctic Warbler)
# 短翅树莺 - Cettia diphone ( Japanese Bush Warbler)
# 棕扇尾莺 - Cisticola juncidis ( Zitting Cisticola)
# 黄眉柳莺 - Phylloscopus inornatus ( Yellow-browed Warbler)
# 东方大苇莺 - Acrocephalus orientalis( Oriental Reed Warbler)
* 鹀科 Emberizidae
# 小鹀 - Emberiza pusilla ( Little Bunting)
# 冠鹀 - Melophus lathami ( Crested Bunting)
# 田鹀 - Emberiza rustica ( Rustic Bunting)
# 野鹀 - Emberiza sulphurata ( Yellow Bunting)
# 金鹀 - Emberiza aureola ( Yellow-breasted Bunting)
# 锈鹀 - Emberiza rutila ( Chestnut Bunting)
# 白眉鹀 - Emberiza tristrami ( Tristram's Bunting)
# 黄眉鹀 - Emberiza chrysophrys ( Yellow-browed Bunting)
# 黑脸鹀 - Emberiza spodocephala ( Black-faced Bunting)
# 黄喉鹀 - Emberiza elegans ( Yellow-throated Bunting)
# 赤胸鹀 - Emberiza fucata ( Chestnut-eared Bunting)
* 卷尾科 Dicruridae
# 灰卷尾 - Dicrurus leucophaeus ( Ashy Drongo)
# 大卷尾 - Dicrurus macrocercus harterti Baker ( Black Drongo)
# 发冠卷尾 - Dicrurus hottentottus ( Hair-Crested Drongo)
* 椋鸟科 Sturnidae
# 灰椋鸟 - Sturnus cineraceus ( White-cheeked Starling)
# 丝光椋鸟 - Sturnus sericeus ( Red-billed Starling)
# 灰背椋鸟 (噪林鸟) - Sturnus sinensis ( White-shouldered Starling)
# 紫翅椋鸟 (欧洲八哥) - Sturnus vulgaris ( European Starling)