#genome
stringclasses
121 values
asm_name
stringclasses
120 values
assembly_accession
stringclasses
120 values
bioproject
stringclasses
45 values
biosample
stringclasses
120 values
wgs_master
float64
seq_rel_date
stringclasses
98 values
submitter
stringclasses
76 values
ftp_path
stringclasses
120 values
img_id
float64
637M
2.51B
gtdb_id
stringclasses
120 values
scope
stringclasses
3 values
assembly_level
stringclasses
1 value
genome_rep
stringclasses
1 value
refseq_category
stringclasses
3 values
release_type
stringclasses
2 values
taxid
float64
1.15k
681k
species_taxid
float64
7
911k
organism_name
stringclasses
120 values
infraspecific_name
stringclasses
112 values
isolate
stringclasses
1 value
superkingdom
stringclasses
2 values
phylum
stringclasses
18 values
class
stringclasses
30 values
order
stringclasses
56 values
family
stringclasses
75 values
genus
stringclasses
89 values
species
stringclasses
117 values
classified
bool
1 class
lv1_group
stringclasses
2 values
lv2_group
stringclasses
13 values
score_faa
float64
0.93
1
score_fna
float64
0.88
1
score_rrna
float64
0.1
1
score_trna
float64
0.6
1
total_length
float64
618k
9.12M
contigs
float64
1
22
gc
float64
22.5
72.2
n50
float64
616k
9.03M
l50
float64
1
1
proteins
float64
525
7.92k
protein_length
float64
172k
2.68M
coding_density
float64
74
96.9
completeness
float64
76.3
100
contamination
float64
0
4.4
strain_heterogeneity
float64
0
100
markers
float64
124
383
5s_rrna
stringclasses
2 values
16s_rrna
stringclasses
1 value
23s_rrna
stringclasses
1 value
trnas
float64
14
20
draft_quality
stringclasses
2 values
start_position
int64
0
10M
human_label
int64
0
1
autotrain_text
stringlengths
150
150
autotrain_label
class label
121 classes
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,178,300
1
GGAAGAGCACCCACACTCCCAGACGAGCATCGGACAGCGTGGAGCAGCACCCACACTCCCAGGTGCGCGTGTGATGGTCCGGAGCAACACCCACACACACAGGAGAGCCTGCGACAGCCTGGAGCAGCACCCACAGCCCCAGTTTAGCAT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,622,350
1
TAGGATGTGGCTGGTCTGGGACTGTACTTTGAGGGCCACTGGCCTAGTTTTCTGGGGGAGAAGGAGGCTTATCTGATTTCTGCCTCTGGACCATTTCCTGACTTCCAAGGGTGGCCCTTATCTCAAGCAGCCGCCAGCCTCTCCTTGCGC
120homo sapiens
G000008165
ASM816v1
GCF_000008165.1
PRJNA58091
SAMN02598266
null
2004/06/24
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/165/GCF_000008165.1_ASM816v1
637,000,015
RS_GCF_000008165.1
Monoisolate
Complete Genome
Full
reference genome
Major
260,799
1,392
Bacillus anthracis str. Sterne
strain=Sterne
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Eubacteria
Firmicutes
1
1
1
1
5,228,663
1
35.38
5,228,663
1
5,471
1,495,624
84.251844
99.23
0.15
0
381
yes
yes
yes
20
high
4,418,570
0
TTCGGGAATAAGAAACGACCTGTATCCCCAACAATCCCCGCTAAAATAAGACGAGCTGCTTCTTTTGTTATTTGTAACCCTTTATCTTTTCCATAATTATAAAACTCATAAATCATTTCACTTGTAGAACTTGCTGTCGTATCTACCCAC
6Bacillus anthracis str. Sterne ASM816v1
G000008505
ASM850v1
GCF_000008505.1
PRJNA58089
SAMN02598265
null
2004/12/27
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/505/GCF_000008505.1_ASM850v1
637,000,023
RS_GCF_000008505.1
Monoisolate
Complete Genome
Full
reference genome
Major
281,309
1,428
[Bacillus thuringiensis] serovar konkukian str. 97-27
strain=97-27
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus thuringiensis
true
Eubacteria
Firmicutes
1
0.998
1
1
5,314,794
2
35.37
5,237,682
1
5,361
1,516,528
84.049767
99.07
0.31
0
381
yes
yes
yes
20
high
1,419,340
0
AGGTCCAGTAGCACCCGCTGGTCCTTGAATACCTTGAGGCCCTTGAGGTCCAGTAGCACCCGCTGGTCCTTGAATACCTTGAGGCCCTTGAGGTCCAGTAGCACCCGCCGGTCCTTGCGCACCAGTAGCGCCAGTAGCCCCTGCTGGCCC
118[Bacillus thuringiensis] serovar konkukian str. 97-27
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,183,700
1
AACCTGGAGCAGGAACCACAACCCCAGGTGAGCATCTGATAGCCTGGAATAGCACCCACACACCCAGGTGAGCATCTGAGAGCGTGGAGCAGCACCCACACTCCCAGGTGAGCATCTGATATCCTGGAAAAGCACCCACACCCCCAGGGG
120homo sapiens
G000010665
ASM1066v1
GCF_000010665.1
PRJNA224116
SAMD00060954
null
2009/06/11
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/665/GCF_000010665.1_ASM1066v1
644,736,352
RS_GCF_000010665.1
Monoisolate
Complete Genome
Full
representative genome
Major
573,370
184,917
Desulfovibrio magneticus RS-1
strain=RS-1
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfovibrionales
Desulfovibrionaceae
Desulfovibrio
Desulfovibrio magneticus
true
Eubacteria
Proteobacteria
0.99
0.996
1
1
5,315,620
3
62.67
5,248,049
1
4,555
1,546,858
85.744052
100
0
0
357
yes
yes
yes
20
high
5,226,780
0
GGCCATGGTCCTGTCGCGCGCCAACGACAACGTCGCCGCCGCCGCCATCGCTGCTGGAGACGCGGCCAAGAACATCCAGGCGGCCCAACGCTACCTCGACATCCTCATCGACGTGAACGACCAGGGCGGCGCGAAATCGGCGGCCGCCGC
36Desulfovibrio magneticus RS-1
G000009125
ASM912v1
GCF_000009125.1
PRJNA224116
SAMEA3138192
null
2003/05/06
Genoscope
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/125/GCF_000009125.1_ASM912v1
637,000,231
RS_GCF_000009125.1
Multiisolate
Complete Genome
Full
representative genome
Major
267,608
305
Ralstonia solanacearum GMI1000
strain=GMI1000
null
Bacteria
Proteobacteria
Betaproteobacteria
Burkholderiales
Burkholderiaceae
Ralstonia
Ralstonia solanacearum
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
5,810,922
2
66.98
3,716,413
1
5,062
1,725,241
87.482692
99.94
0
0
373
yes
yes
yes
20
high
5,654,220
0
CTCCCCCACGCCAATGCACCACTCGCCATGAAGATGGGCACCGAGCCTCACTTGACCAATACTTGCAAGCCAGACAACCTTAGGCGCTATAAGCGGAGGATCGAGTAGCAGTATTTTCATTTACCTTCCGAATTGAAGGCTTTACATCGT
81Ralstonia solanacearum GMI1000
G000008345
ASM834v1
GCF_000008345.1
PRJNA224116
SAMN02603281
null
2004/07/30
Goettingen Genomics Laboratory
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/345/GCF_000008345.1_ASM834v1
637,000,215
RS_GCF_000008345.1
Monoisolate
Complete Genome
Full
representative genome
Major
267,747
1,747
Propionibacterium acnes KPA171202
strain=KPA171202
null
Bacteria
Actinobacteria
Actinobacteria
Propionibacteriales
Propionibacteriaceae
Cutibacterium
Cutibacterium acnes
true
Eubacteria
Actinobacteria
1
1
1
1
2,560,265
1
60.01
2,560,265
1
2,373
780,330
89.799572
100
0
0
319
yes
yes
yes
20
high
55,900
0
ACATGAATCGTAGTTCTTGCTGCGAGGCTGTGAATGACCACAGGCACGTTCTGGCGAACCTCAGCAACGAGAACCCCTGGGCGCGATGCGGTTTCGATCGACAGCGTTGCCGCCGTGGTTGGCCTCTCCTCGATGCGGCTTAACTCTTGA
77Propionibacterium acnes KPA171202
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,484,000
1
AGAATATCCTCCTGATTTTCCAAGTTGGCTCGACTCCTCTGAGCCTCATGACCACCCCAGGAGGGGGCATTTTTTAGGCAGGAAGTCTGAGGCCTCAGGAGGTCGAGGGACTCACCCAAGGCCACACACTGTCTAATGGCCAAGATGGGC
120homo sapiens
G000008565
ASM856v1
GCF_000008565.1
PRJNA57665
SAMN02603976
null
2000/12/11
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/565/GCF_000008565.1_ASM856v1
637,000,092
RS_GCF_000008565.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,230
1,299
Deinococcus radiodurans R1
strain=R1
null
Bacteria
Deinococcus-Thermus
Deinococci
Deinococcales
Deinococcaceae
Deinococcus
Deinococcus radiodurans
true
Eubacteria
Terrabacteria
1
0.991
0.8
1
3,284,156
4
66.61
2,648,638
1
3,248
987,980
88.625967
98.72
0
0
359
yes
yes
yes
20
high
147,160
0
CCACCCGGCGCTTCTCCTCCTCGATCACCTCGGCGGGGGCGCGGGCCACGAAGCCCTCGTTGTTCAGCTTGCCCTGCGCCTGCTTGATCTGCTTGTCGAGTTCGGCGAGGCGTTTTTGCTGCTTTTTCACCCAGTCGGCGATGTCCACCG
35Deinococcus radiodurans R1 ASM856v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,554,800
1
AGCTGGGATTACAGGCATGCGCCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGAGTTTCACCATGTTGGCCTGGCTGGTCTCGAACTCTTAGCCTGAAGTGATTGGCTCACCTCAGCCTCCCAAAGTGCTGGGATTACTGG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,900,350
1
CCCAAGCACTTAACACTTAACAAATTACTCCTGATCACCAATACCTAGCAGATGAAGCATAACCCCAGGCCAGCAGGGCCAGGGAGCCATCTCGGGACAAGCACACTCATGTCCCTACACGTATGTGCATGTGCCCACCCCTCGGTTCCA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,697,500
1
ATTTCTTGAAATTTATTCAATGGAAATAATTACGAATGTTTGTAAGTGATGTTCTCCACAGCATTATTTATAAAGCAGTGCAGTGAAAATAATAAAAACAACTGGCCGGGCTCAGTGACTCACGCCTGTAATCCCAGCACTTTGGGAGGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,284,750
1
CACAGCCCCACAACAGACCTCCCACTCGGCTAGCGAGGCCTCAAAGCCACCTCCTGATAGGTAGCAAACTGGGACCCCGGGCGTTTTCTGGAGACAGGGGATGAGAGAACAACACGGAGCTCACAGTGGGGCTTCTTAGGCAGGGGCTGG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,141,050
1
AGGACGGGCCCTACCTGCCAGGCGCAGCATGATGCCCCATGCCAGGGCACCTACCCCTCGGTGTACCTTGGGGCCGGTGCCCAGGCCGGATGTCACGTACTCTGGGTGGCCTGTGGCCCGACGCCTACGCTCAGCAGCACTAAGGGGCAG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,813,550
1
TAGGGTTCACGTCTGAATCGATCACTTGCTGGATTGGGATGGGGGCCGGTTGTCCATCCCTGGAGTGTTGCACAGCCCTGGGTGGGATGCTCCCAGAAGGAAATGCTGAGCACAGAACCACACATATCTGTGCAGGGGCTGGAGGTGAAA
120homo sapiens
G000010985
ASM1098v1
GCF_000010985.1
PRJNA224116
SAMD00060965
null
2010/03/05
Japan Agency for Marine-Earth Science and Technology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/985/GCF_000010985.1_ASM1098v1
646,564,525
RS_GCF_000010985.1
Monoisolate
Complete Genome
Full
representative genome
Major
639,282
197,162
Deferribacter desulfuricans SSM1
strain=SSM1
null
Bacteria
Deferribacteres
Deferribacteres
Deferribacterales
Deferribacteraceae
Deferribacter
Deferribacter desulfuricans
true
Eubacteria
Bacteria
1
0.996
1
1
2,542,933
2
30.31
2,234,389
1
2,468
805,380
93.314963
96.55
1.72
0
345
yes
yes
yes
20
high
1,870,830
0
AATTCCTCCAATAGGTGTGAGTTTTCAACAAGGTCAATAAACACATTAGGATAAATAACCCCTTTTTCTGGATGATTAATCCTAATCAACGCTTCAAAACCTATTATATCCAAATCTTTAACATTATATATGGGCTGCAAATGAAAAACA
33Deferribacter desulfuricans SSM1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,073,650
1
AATACAGCCTCTAACAAAACTAGGCTGTCCCGAACCCCTGGTAATAAAATTGTTTGTCTCTGTACCAAGAAGGTTGGGAAAACACCAAAATTTGCATTGGCGTGGCCCAGGCAGGCTTCGAGGGGTCCGTGCCATGAGACTTAAAGTTCT
120homo sapiens
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
465,790
0
GATGGAGCGGGAATCCGACATGGCGAGTCTCTACGGTTGGCCCGCTAGCCTAGCCAGCCTGTGCCAATCAGGGCAAGGCCAGGTACAGTCGATCACCGTTGACGGCGTCGGCTTGGCACTTTGGGTTAGAACGGCCGTGCATGTCCGAAG
78Pseudomonas putida KT2440
G000009905
ASM990v1
GCF_000009905.1
PRJNA224116
SAMD00061067
null
2004/09/02
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/905/GCF_000009905.1_ASM990v1
637,000,306
RS_GCF_000009905.1
Monoisolate
Complete Genome
Full
representative genome
Major
292,459
2,734
Symbiobacterium thermophilum IAM 14863
strain=IAM14863
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Symbiobacteriaceae
Symbiobacterium
Symbiobacterium thermophilum
true
Eubacteria
Firmicutes
1
1
1
1
3,566,135
1
68.67
3,566,135
1
3,297
1,051,001
86.832243
98.02
0.03
0
347
yes
yes
yes
20
high
1,947,920
0
GACCCGCCCGGCGGTGCGCAGCAGGGCGCGAATCCCCGCAGGGGCCGCCTCCACCGCCTCCAGCGCTTCCTGCACCGCCTTGTCCCGCAGGTCTTTGGGCATGTCCGGCGCCGCGTAGAGCCGGCGGTGCCACCGGGGCGGCGGGGCGCC
99Symbiobacterium thermophilum IAM 14863 IAM14863
G000007145
ASM714v1
GCF_000007145.1
PRJNA57887
SAMN02603845
null
2002/05/24
Sao Paulo state (Brazil) Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/145/GCF_000007145.1_ASM714v1
637,000,344
RS_GCF_000007145.1
Monoisolate
Complete Genome
Full
reference genome
Major
190,485
339
Xanthomonas campestris pv. campestris str. ATCC 33913
strain=ATCC 33913
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas campestris
true
Eubacteria
Proteobacteria
1
1
0.9
1
5,076,188
1
65.07
5,076,188
1
4,292
1,472,146
85.453159
99.64
0
0
358
yes
yes
yes
20
high
4,528,160
0
ATCGGGGTGAAGTCAGCCGCACGCACTGGCGTGGCGCTGGTGATCGGCAAGCTGGTGCCGTTGCTGTTGTTCGTGGCCATCGGCCTGTTTTACGTGGATTGGTCGTGGGCCTTTGCCGGCAGCACGCCGGACCTGCGCGACCTGGGTAAC
112Xanthomonas campestris pv. campestris str. ATCC 33913
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,686,500
1
TTCAAAACCAGCCTGGTCAACATAGCCAGACCCCCACCTTCAGCAACTGTCTCTACAAAATGAAAATAAAAATAATGAAAGAGAGAGGATGGAGGAGAAGGCTGAGACCAGTAACAGATTCCAAAAGGACTAATTGACAAGGAGAAAAAG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,730,250
1
TGATTCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGAAGAACGCGTTTTCAACCGCAGGAGATGGAAGCACCTCAACTTGATCTCATGCATATAAAGGTGTTGGAGTGCGGGCCGTGCCACGACTGGCATAGCCACACTCTGCC
120homo sapiens
G000010125
ASM1012v1
GCF_000010125.1
PRJNA224116
SAMD00061076
null
2005/08/12
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/125/GCF_000010125.1_ASM1012v1
637,000,284
RS_GCF_000010125.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,451
29,385
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
strain=ATCC 15305
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Staphylococcus
Staphylococcus saprophyticus
true
Eubacteria
Firmicutes
1
0.992
1
1
2,577,899
3
33.19
2,516,575
1
2,502
730,892
83.519176
99.44
0
0
348
yes
yes
yes
20
high
1,963,390
0
AGTCGAATCTTTTTCTGTAACCGTTACCCATCTAAAACCACCGCCAATTTCAATATTATGTTTTGTCTTAAACCCTAGTTTTTCAGTATAAAATTGTTGAGCCTTGTCTTGATCATCTACAAAAATGCTTGTCGCTATAATTCTCATTTA
90Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 ASM1012v1
G000006745
ASM674v1
GCF_000006745.1
PRJNA57623
SAMN02603969
null
2001/01/09
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/745/GCF_000006745.1_ASM674v1
637,000,333
RS_GCF_000006745.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,277
666
Vibrio cholerae O1 biovar El Tor str. N16961
strain=N16961
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio cholerae
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,033,464
2
47.49
2,961,149
1
3,594
1,184,587
86.533164
99.86
0.03
0
360
yes
yes
yes
20
high
548,730
0
AGGTGTCAGGTTCGGTTGGGAATAATGGCCTTAGAATTGTTTATTACTACTAACCAGCTAGCTTAAGCACTTTTCTTTCAGCAAGAGATGTATTGCAATTAGATGCTGAGGTTATATGGCTACTCCACCAACTCATGAGTTTTCTGCGTT
107Vibrio cholerae O1 biovar El Tor str. N16961
G000007385
ASM738v1
GCF_000007385.1
PRJNA224116
SAMN02603680
null
2005/02/02
NIAB, Rural Development Administration
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/385/GCF_000007385.1_ASM738v1
637,000,346
GB_GCA_000007385.1
Multiisolate
Complete Genome
Full
representative genome
Major
291,331
347
Xanthomonas oryzae pv. oryzae KACC 10331
null
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas oryzae
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,941,439
1
63.69
4,941,439
1
4,831
1,427,680
85.113992
99.82
0
0
355
yes
yes
yes
20
high
2,791,620
0
CGCGAGAGGTTGCCCTGCGCGTCTGCCGAGGCGATCATCCGGCCCAGTGCGTCATAGCGGAACCTCAGGTTCCGGCCCAACGCGTCACTGACCTGGGTGAGGTCTTCGCCGGTCCACGTCAAGGTGGTAGTGTGGCCCAGCGGGTCTGCC
113Xanthomonas oryzae pv. oryzae KACC 10331
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
243,150
1
CTCTGACATTTCCTTTCGATCAATTTGGCTGCACCTCTTCTGTCAAGCAGGAGCTGGAGGACATTTTGGTCAGCTCCTCCCCGGAAGGGAGCTACGATCTCTGCTCTAACAATCCCCAGTTGTTGTCTTAAGTTAGACTGTGTTCATCAA
120homo sapiens
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
2,806,180
0
CATGGGGCATGGCGATATCCTGGTGATTGGCGATGCCGGGCTGCCGGTGCCGCCGGGTGTGGAACTGATCGACCTGGCCATTACGCCTGGCCTGCCGGACTTCGCCAGCGTGCTGCGGGTGGTGCTGAGCGAATTGCAGGTTGAGCGGCA
78Pseudomonas putida KT2440
G000008925
ASM892v1
GCF_000008925.1
PRJNA58233
SAMN02604111
null
2006/03/30
University College Cork
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/925/GCF_000008925.1_ASM892v1
637,000,143
RS_GCF_000008925.1
Monoisolate
Complete Genome
Full
reference genome
Major
362,948
1,624
Lactobacillus salivarius UCC118
strain=UCC118
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Lactobacillaceae
Lactobacillus
Lactobacillus salivarius
true
Eubacteria
Firmicutes
1
0.986
1
1
2,133,977
4
33.04
1,827,111
1
2,106
630,045
86.976336
99.48
0.52
0
292
yes
yes
yes
20
high
766,220
0
CTATGCGTGTAGATATAGAACAAAATGGAGTTCAATATCGTGCAAATGGTTCTAAGATGAAATTCCCTGGATTTATTAAGGTATATAAAGCAGCAACAAGTAAAGATAACTTATTGCCAGAATTGAAGGTTGGCGATGAGGTTGACATGG
53Lactobacillus salivarius UCC118
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
1,971,710
0
CTTTTGATATTCAGTGATATGAAATGAAAGTATAGAGATGGCAACGGTGATGACTAAGTGAGTAGCGGAAAAAATTTACAAATATGTAACAAACAATTAAACTGAAGATTTGCGGTTAAATTTGTTACGTTGTACACGGTAGTTACCTTT
70Nostoc sp. PCC 7120 ASM970v1
G000010665
ASM1066v1
GCF_000010665.1
PRJNA224116
SAMD00060954
null
2009/06/11
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/665/GCF_000010665.1_ASM1066v1
644,736,352
RS_GCF_000010665.1
Monoisolate
Complete Genome
Full
representative genome
Major
573,370
184,917
Desulfovibrio magneticus RS-1
strain=RS-1
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfovibrionales
Desulfovibrionaceae
Desulfovibrio
Desulfovibrio magneticus
true
Eubacteria
Proteobacteria
0.99
0.996
1
1
5,315,620
3
62.67
5,248,049
1
4,555
1,546,858
85.744052
100
0
0
357
yes
yes
yes
20
high
1,719,900
0
TCGCCTTCCTGCGCCGCCTGGAGGGTATTTTTTTTCGCGCCTACGCCAAGGGCGGGCGCGGCGACCTCACGCGCCTGGCCACCAGCGACAACCCCTTGGCTCTCTGGCGGCAGGCTCTGCGCGACCGGGTGGCCGCTGCCCTGGCCCCGC
36Desulfovibrio magneticus RS-1
G000010525
ASM1052v1
GCF_000010525.1
PRJNA224116
SAMD00060925
null
2007/10/16
University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/525/GCF_000010525.1_ASM1052v1
641,228,476
RS_GCF_000010525.1
Monoisolate
Complete Genome
Full
representative genome
Major
438,753
7
Azorhizobium caulinodans ORS 571
strain=ORS 571
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Xanthobacteraceae
Azorhizobium
Azorhizobium caulinodans
true
Eubacteria
Proteobacteria
1
1
0.9
1
5,369,772
1
67.32
5,369,772
1
4,810
1,620,542
88.922714
100
0
0
358
yes
yes
yes
20
high
440,960
0
CACCGCCTTCTCGACCGCGCTGCGGCTGGTGCTCGGCTGGGGTTATGGCTTTGCCGTGCCGGCGGTCGCCTTCTTCCTGCTGGCGGGCCCCACCATCCTCGGGCTCATGAGCACCAATGGGGAGGTGGTGGCCGAGGCGGTGCGCTATCT
4Azorhizobium caulinodans ORS 571
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,846,250
1
GCAGCTAGGGAAACCCAGGGTGCACGATGGCCTCTGAGAGGGGAGCCTCGTGCCGGCGTGGCTCACCTGTGCCACCAACACCCTCCCCACCGAACCCCAGAAGTAACCTTGGAACCCACAGTTCCATACCAGGTCCTTGGGAGAATGAAT
120homo sapiens
G000009745
ASM974v1
GCF_000009745.1
PRJNA224116
SAMD00061075
null
2003/10/03
NHRI, Taiwan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/745/GCF_000009745.1_ASM974v1
637,000,337
RS_GCF_000009745.1
Multiisolate
Complete Genome
Full
representative genome
Major
196,600
672
Vibrio vulnificus YJ016
strain=YJ016
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio vulnificus
true
Eubacteria
Proteobacteria
1
0.996
1
1
5,260,086
3
46.68
3,354,505
1
4,639
1,553,759
87.03525
100
0.14
0
369
yes
yes
yes
20
high
2,606,370
0
TCGACTTACTTCATGTTCAGCTCTACAACAATGGTGGATTACCCAACCCTTACCTACCGGGCGCCGCTCCTGAAGGCTCTGTCGATATGATGGTTGCGCAATCTAAGATGTTGATTGAAGGGTTTGAACTCGCCGATGGTACTCGTTTTG
108Vibrio vulnificus YJ016
G000010065
ASM1006v1
GCF_000010065.1
PRJNA224116
SAMD00061073
null
2004/12/16
Nagoya University, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/065/GCF_000010065.1_ASM1006v1
637,000,307
RS_GCF_000010065.1
Monoisolate
Complete Genome
Full
representative genome
Major
269,084
32,046
Synechococcus elongatus PCC 6301
strain=PCC 6301
null
Bacteria
Cyanobacteria
null
Synechococcales
Synechococcaceae
Synechococcus
Synechococcus elongatus
true
Eubacteria
Cyanobacteria
1
1
0.9
1
2,696,255
1
55.48
2,696,255
1
2,691
815,460
89.10092
99.73
0
0
342
yes
yes
yes
20
high
1,377,220
0
TAAGGCTCAAGCCCCGCTGCGATAAGTTGTAGACCAGGTTATCAACCAGCCAGATTGCACCTAGGCCCACAACCAGCAGCACGAGTAACTGCCAGACCCAGCGCCAGAGACGTTCATCTCGCCAGAACGGTCCTTGTAATTTCAGACGAA
100Synechococcus elongatus PCC 6301
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
951,750
1
GGAGCGGCTGTCAGGCAGTGCCAGCCCTGAGCAAGTGCCAGCTGGTGAGTGCTGTGCTCTGCAGGAGTATGAGGCCGCCGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCTGAGCGAGGAGAC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,853,700
1
CAGTTTGAGATGCCGCTCTGGCCCCTGGGTTCATGGCTCCACGTCTGATTCTGAGGAGGAGGCTTCGGCTCCTTTGGATTCACACTGGGTTCTATGATGGGCCCCTGACGGGAGGGCCTGCTCTAGGAGGCATCCCCCACCGCTGTCCTG
120homo sapiens
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
7,061,990
0
TACCGCGGCGACCAGTGGCCCAAGCTGCTGGAGAACATGAAGGTCGACAAGAAGTCCCGCGGGGACCTGCTGCGCTTCATCGTCCTCGACGGCATCGGCAAGCCCACCGTCCTGGAGGGCCCCGACCCGGCCGTGCTGCTCGCCGCCTAC
96Streptomyces griseus subsp. griseus NBRC 13350
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,736,300
1
TTGGATTTGCCCAGGGCTGAGCACTCCCTGGTCCGAGGTACCCAACAAGCTGACCTGAGAATGGGCAGCATCCCCTTCCCTCCCTCCTTCCCTCCTTCCCTCCTCCTCTCCTTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCTCCTCCTC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,277,600
1
ATTTAACTTAAAGCCCAAAGGACTTTTCAAAATGAAATTGTTATTCCAACTACACCCAAAAATCATTAAGGCTGCCCCTGGGTGCTCACGTACGTTTTAACAAAAAGCAAGGAATTCTATGTCCTGCTAAAGCAATGGAAAACCCTGATG
120homo sapiens
G000007645
ASM764v1
GCF_000007645.1
PRJNA57861
SAMN02603126
null
2002/12/20
Chinese National HGC, Shanghai
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/645/GCF_000007645.1_ASM764v1
637,000,281
RS_GCF_000007645.1
Monoisolate
Complete Genome
Full
reference genome
Major
176,280
1,282
Staphylococcus epidermidis ATCC 12228
strain=ATCC 12228
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Staphylococcus
Staphylococcus epidermidis
true
Eubacteria
Firmicutes
1
0.977
0.9
1
2,564,615
7
32.05
2,499,279
1
2,354
721,937
82.93198
99.81
0
0
345
yes
yes
yes
20
high
1,906,450
0
ATAAAGTTGAATGATTAATTTCGTTTATTAATGTAGATTTAACCTCTAAGAAGTGTTCTAATTCTTCAATTAATTGAGTTATTTTACTACATTGATTTTGAGTTAATGTAATAACTAGTCTACGTTGGTCGTATGGATGTCGTTTTTTTG
88Staphylococcus epidermidis ATCC 12228 ASM764v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,896,850
1
TATGCACAAAAGCGATAAATAATATGAACTCTTATGACCAAGATTGGCTGCCATAAATAATAGATTTTACTTTGTTTTTTATTTTAAATGTTTCACTTAAAATTATCTTTTATAATCAGGTGATAACAGACAGTTCGTAAAGTACATAGC
120homo sapiens
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
1,067,040
0
TCTGCGGCTGTCGGGCTGCAAAGACTTCGTTACCGCAGGCCTGGAGGCGGAGTGGTTGCTGGTGGCGGCGCGTAGCGAAGCGGCTGGCGCGGCACCGCAACTGAGCCTGGCGGTGGTCTATCCCGGGGAGCCGGGGGTGACACTGGAGCC
78Pseudomonas putida KT2440
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,872,550
1
CTTTCATGAGTAATATCTTTCCGTGTTAAGTGGTAGGCACACAATGGTGAAATAAAACACAGGGCTCAGCGACTCCGATGGCTTGGGGTGTGGGAGGGGAAGGTTGCCTTTATGGTGTGAGTTTCCTGTGCCTCAGCTCTCCTGGATTGT
120homo sapiens
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
1,539,070
0
TAATCCCACTTCGTAGAGATAGCTATGGGTTTTGAGGGAAAATAATAAAGTTAACCCGTAAACTATTAATAAAACCGTGGCGGTGACTAGGGAAAGACTGAGAATATCGGCAACTTCCACCACGTTAGAAGTATATATTACCAAAGTTGG
64Microcystis aeruginosa NIES-843
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
5,767,320
0
CTGTAAGCCCTTTTGCAACTGCCATGATGTCTGGCACGACCCCATCATGCTCACAAGCGAACATTTTGCCCGTACGTCCAAATCCTGTCGCTACTTCGTCTGCGATCAGCAATACATCATGGGCGCGCAACATCTCCGCGATTTTTTTCA
15Brevibacillus brevis NBRC 100599
G000007945
ASM794v1
GCF_000007945.1
PRJNA224116
SAMN02604087
null
2003/07/23
Univ. Ohio
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/945/GCF_000007945.1_ASM794v1
637,000,124
RS_GCF_000007945.1
Monoisolate
Complete Genome
Full
representative genome
Major
233,412
730
Haemophilus ducreyi 35000HP
strain=35000HP
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pasteurellales
Pasteurellaceae
Haemophilus
[Haemophilus] ducreyi
true
Eubacteria
Proteobacteria
1
1
1
1
1,698,955
1
38.22
1,698,955
1
1,689
506,660
87.856241
99.43
0.02
0
277
yes
yes
yes
20
high
1,102,920
0
AGGCGGTGTACAAGTAATGGTAACATTACCCAATACCTTACTTTAAGCATCATTCACTTTTTATTATTCAGTAAAGCAATTAGCAACGTATTTGAAATTATGTTGGTTATTTATAATCAACCCCATCCAAGCTAGCAATCACCGACTAGC
44Haemophilus ducreyi 35000HP
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,189,000
1
AGGATCTAAACAAGATCACGAAGGAGGCAGCAATGAAGTCGGACAAGCTGCCTGGGATCAAGTTGCCTTCTAAATATGCTCAAAGTGGCTGCCCTCCACAGAGGGAGAAGATTTATGGGTATTAAGGAAAAAAGGAATTAAAATAATCAA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,277,900
1
CACAAACACTGTATTAGCTGCATTCTTAAACACGCCTACTATCTAAAACATACACAGCAATGTAACTGATGGGTACATTCTCAATCAGGTAATTTTGATAGAAAAAGTATACCAACCAGTGTGCCATTTGGCCATTAAAACAATAGGAAA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,695,200
1
GAAATCAGGATAGAGAAAAGGAGTTCCCACGCACCAGATATGAGCTGTGGAGGGGCTGTGGGGAGGGTCCTCTTGGCAGGCACAGCAGCAAGAATCAAACCATCCAAAGTAGAGACACTTCTGCCCGTGGGGGCAAAGGAGGCTTCCAGA
120homo sapiens
G000010405
ASM1040v1
GCF_000010405.1
PRJNA224116
SAMD00060908
null
2007/05/08
Japan Agency for Maine-Earth Science and Technology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/405/GCF_000010405.1_ASM1040v1
640,427,107
RS_GCF_000010405.1
Monoisolate
Complete Genome
Full
representative genome
Major
412,965
410,330
Candidatus Vesicomyosocius okutanii HA
strain=HA
null
Bacteria
Proteobacteria
Gammaproteobacteria
null
null
null
Calyptogena okutanii thioautotrophic gill symbiont
true
Eubacteria
Proteobacteria
1
1
1
1
1,022,154
1
31.59
1,022,154
1
976
297,702
85.803803
93.54
0
0
271
yes
yes
yes
20
high
973,960
0
AGTGATAGTTTTAGTACCACTTTCATAAGAAGACTCTAAAAAAGGCTGCTGAAAAGCCTGTGCATCATAAAACTCTATTGGATATTCCAAATCAATTGCAGGTAATAATGAATTAGTTTGCTGATGATAAAAAGAGCTTAGTCCGCTTAG
20Candidatus Vesicomyosocius okutanii HA
G000008865
ASM886v1
GCF_000008865.1
PRJNA57781
SAMN01911278
null
2004/05/11
GIRC
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/865/GCF_000008865.1_ASM886v1
637,000,108
RS_GCF_000008865.1
Monoisolate
Complete Genome
Full
reference genome
Major
386,585
562
Escherichia coli O157:H7 str. Sakai
strain=Sakai substr. RIMD 0509952
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Escherichia
Escherichia coli
true
Eubacteria
Proteobacteria
1
0.996
0.9
1
5,594,477
3
50.48
5,498,450
1
5,399
1,663,868
87.620737
99.97
0.33
0
374
yes
yes
yes
20
high
3,293,290
0
CCCGACTCCATCGCCGCTTTCGCGACCGCAGGAGCAATCTTGACTATCAGACGCGGATCAAACGGTTTTGGAATGATGTATTCAGGGCCAAAGCTCAGATCCTGATCGCCATACGCTGAAGCCACCACTTCACTCTGTTCCGCATGGGCC
38Escherichia coli O157:H7 str. Sakai Sakai substr. RIMD 0509952
G000009985
ASM998v1
GCF_000009985.1
PRJNA224116
SAMD00061077
null
2005/12/01
Tokyo University of Agriculture and Technology, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/985/GCF_000009985.1_ASM998v1
637,000,155
RS_GCF_000009985.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,108
84,159
Magnetospirillum magneticum AMB-1
strain=AMB-1
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Rhodospirillaceae
Magnetospirillum
Magnetospirillum magneticum
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,967,148
1
65.09
4,967,148
1
4,628
1,522,305
90.298759
99
0
0
360
yes
yes
yes
20
high
1,285,960
0
GCTGATCGTGGCGGGCAAGCTGCTCTACGGCCTGCCGGCGCCCCTGGCCGGGTGGCTGGGCGACCGCTGGAGCACCGTGGGCATGATGGCCGTCTATTTCATTGGCTTAGGCGCCGCGGCCATCGCCGTCGGCCTGTCCCACGGGCCGGT
56Magnetospirillum magneticum AMB-1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,155,800
1
GAACCTCTGCCCAGAACAGCAACTATCACATTGTAATCAGCATTTCATAAGAGATGCTGTTCAAACAGGAAGGCACCTGCTAATGTGCAAAAACTGTACAAAGGGGGCTCAAGATCTAATAGGTAAAATAAAAATATTTACAATTTTATT
120homo sapiens
G000007385
ASM738v1
GCF_000007385.1
PRJNA224116
SAMN02603680
null
2005/02/02
NIAB, Rural Development Administration
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/385/GCF_000007385.1_ASM738v1
637,000,346
GB_GCA_000007385.1
Multiisolate
Complete Genome
Full
representative genome
Major
291,331
347
Xanthomonas oryzae pv. oryzae KACC 10331
null
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas oryzae
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,941,439
1
63.69
4,941,439
1
4,831
1,427,680
85.113992
99.82
0
0
355
yes
yes
yes
20
high
3,550,040
0
GCTATTGCAGTCTTAGAACCTGTTCACAATCTTATTCAAACCGTGCAAACTCCACGAATGCGCGAGAAGAACTATCCAAGTGACGTGAGCCGTGAGCGGTTCGAGCAAATCCGCCCGATTCTGGAGCAAGCCCGCAAGCGCACCAAGCCT
113Xanthomonas oryzae pv. oryzae KACC 10331
G000008625
ASM862v1
GCF_000008625.1
PRJNA57765
SAMN02603207
null
1999/12/22
DIVERSA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/625/GCF_000008625.1_ASM862v1
637,000,010
RS_GCF_000008625.1
Monoisolate
Complete Genome
Full
reference genome
Major
224,324
63,363
Aquifex aeolicus VF5
strain=VF5
null
Bacteria
Aquificae
Aquificae
Aquificales
Aquificaceae
Aquifex
Aquifex aeolicus
true
Eubacteria
Bacteria
1
0.994
0.9
1
1,590,791
2
43.3
1,551,335
1
1,776
514,666
95.304851
98.98
1.22
75
317
yes
yes
yes
20
high
270,920
0
GCTCAAAACACTCGCTATAAAACCCATAAAGAACATGAACATAGACTTCCTCATACTCAACGCAAAGCACATGCTCATACACCCCAGAACTAAGAACTGGAGCAAGATGAAGCAAGTTCTCAAGAAAGTATTTGAAGAAGAGGGCGTTAC
2Aquifex aeolicus VF5
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,990,650
1
CTCACAAGATTAGAAAAGCCATCTGCTCCTGTATCTCAGGCAGCAGTAGGTGCAAGGGTCTCTAGGTGCCTCCTTAGCTTCCATGAGCTGAGCAAGAGTGCTGCCTCCCTACCAAGCCTACTGTTTCAGAAGGCCTTGGGGAGACATCAT
120homo sapiens
G000009925
ASM992v1
GCF_000009925.1
PRJNA58195
SAMD00061068
null
2004/09/16
Kitasato Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1
637,000,025
RS_GCF_000009925.1
Monoisolate
Complete Genome
Full
reference genome
Major
295,405
817
Bacteroides fragilis YCH46
strain=YCH46
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides fragilis
true
Eubacteria
Bacteroidetes
1
0.998
0.9
1
5,310,990
2
43.2
5,277,274
1
4,416
1,603,639
88.979964
99.26
0
0
347
yes
yes
yes
20
high
737,750
0
ATGTGGAAATGGTTATTAGTGATCCGTTACATATCACTCATGCTTTAGAAGAGGAAGAGGTAGCTGGAGGAGGCATCTTTGTTACTTATCCGGTAGTCGGAAAAGAAAAAGCCGTGACCCATGTTAAGGCTCATGTCAGAAACGAAGGGA
10Bacteroides fragilis YCH46
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
7,338,370
0
ACGAACACGGGCGGCGGACCGTCGCGATCTACTCCCGCCCTGACAACGACACCGGTGACTGGACCCGGCACGGCGCCGGTATCCTCACCGAGGCGCCCCAGGCGACGGATGCAACGGAGGCGACCGAGACGTCCGACGCCCCCGGTGCTT
96Streptomyces griseus subsp. griseus NBRC 13350
G000008865
ASM886v1
GCF_000008865.1
PRJNA57781
SAMN01911278
null
2004/05/11
GIRC
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/865/GCF_000008865.1_ASM886v1
637,000,108
RS_GCF_000008865.1
Monoisolate
Complete Genome
Full
reference genome
Major
386,585
562
Escherichia coli O157:H7 str. Sakai
strain=Sakai substr. RIMD 0509952
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Escherichia
Escherichia coli
true
Eubacteria
Proteobacteria
1
0.996
0.9
1
5,594,477
3
50.48
5,498,450
1
5,399
1,663,868
87.620737
99.97
0.33
0
374
yes
yes
yes
20
high
3,495,830
0
CGATAAACTTAATAACATTATCGAGAGGGTTGTTTTTATTGCTTGGTTCAAAAATAAATATATTGTTCATAATGCTCTCCAGGGATTGAATTTTTTACACGTTAAACATTTCAAATCCTCTTTCGTATCTTCCAATAAGAAAAATGCATC
38Escherichia coli O157:H7 str. Sakai Sakai substr. RIMD 0509952
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
5,817,890
0
GTCTGAAGCCCCCGCATCCACAGCTCGGGCCAACAGGTCGGTCACATCCATAAGACTCCCCAAAGGCCTTCAAGCAGGTAGAATGCCGCAGACCCCACAGCTGCCGGCATCGATCCATGTCCACCCTAGCAGACAACCTTTCCGCGATTT
78Pseudomonas putida KT2440
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,122,350
1
CCCACACCCCCAGGCGAGCATCTGACCGAACGGAGCAGCACCCACAACCCCAGGCGAGCATCTGACAGCCTGGAACAGCACCCACAACCCCAGGTGACCATCTGACAGCCCGCAGCAGCACCCACACGCACAGGTGAGAATCTGACAGTG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,509,200
1
CAGTTCCTCTGCCTCTATTGTATTCTGGAAGTAAATACCTTGTTTTGATTTTACACACTAATAGGTAGAAGGAAAAAACATCTCTAGATAAGAGTTTGGACTTGGGACTTGAACTTTTCAGTTAACACCGGAAATTAGAGTCAAGACTTT
120homo sapiens
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
4,882,280
0
TGGATCGAGGAACCAGCGATTACGACTATTGGCATCCATATGCACTCTCCTCACAGCGTGAACCCATCGTGAGGGAGCATAGTTATGTGGAGCGACCGCGCCTGCTCGTTCTATCTAAGCAACTGTAAAAACTCCATAACCCATCGATCC
86Sinorhizobium meliloti 1021
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,295,400
1
GAATCCCTTGAACCCGGGAGGCAGAGGTTGCAGTAAGCCGAGATGCTGCCACTTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCACAAAAAAAAAAAAAAAAAAAGGGAACTGACTTCCCAATCTTTGTGTCTCAGAACAAAA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,745,250
1
ATTCAGATAATATGACCTCTTTACCATGAAGACAAGACTTTCTACATTCCCTAGGCTAGTGATCCAGGCTTTCAGCTTTTCCAAATTTTAATTTTAAACTGTTTAGATTTTTTTTCATATTATGTCTCCTTCTAATCCTTGTATAACAAG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,529,300
1
GGAGGCTGAGGCAGGAGAATCGCTTGAAACCAGAAGGCGGAGGTTGCAGTGAGCTGAGATTGTGCCACTGCACTCCAGCATGGGCAAAAAGAGTGAAAGTCTGTCTCAAAAAAAATTTTTTTATTTAATTAATTAATTTATTTTTTAGAC
120homo sapiens
G000010065
ASM1006v1
GCF_000010065.1
PRJNA224116
SAMD00061073
null
2004/12/16
Nagoya University, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/065/GCF_000010065.1_ASM1006v1
637,000,307
RS_GCF_000010065.1
Monoisolate
Complete Genome
Full
representative genome
Major
269,084
32,046
Synechococcus elongatus PCC 6301
strain=PCC 6301
null
Bacteria
Cyanobacteria
null
Synechococcales
Synechococcaceae
Synechococcus
Synechococcus elongatus
true
Eubacteria
Cyanobacteria
1
1
0.9
1
2,696,255
1
55.48
2,696,255
1
2,691
815,460
89.10092
99.73
0
0
342
yes
yes
yes
20
high
1,595,620
0
TGTGGGTGTTTGAGCAACTGCAAGGAGTGCTCTACGTCGCGGTGCCGATTCGGATGACGGTGGTGCGACTTCAACGGGGTGGCCTGCTGGTCTATGCACCAATCGCCCCCACCCGCGAATGCCGACGCCAGCTCCAAGCCTTGGAAAATC
100Synechococcus elongatus PCC 6301
G000006175
ASM617v2
GCF_000006175.1
PRJNA224116
SAMN00000040
null
2010/06/03
US DOE Joint Genome Institute (JGI-PGF)
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/175/GCF_000006175.1_ASM617v2
646,564,549
RS_GCF_000006175.1
Multispecies
Complete Genome
Full
representative genome
Major
456,320
2,188
Methanococcus voltae A3
strain=A3
null
Archaea
Euryarchaeota
Methanococci
Methanococcales
Methanococcaceae
Methanococcus
Methanococcus voltae
true
Archaea
Euryarchaeota
0.97
1
1
1
1,936,387
1
28.59
1,936,387
1
1,727
526,927
80.167033
99.05
0
0
165
no
yes
yes
19
medium
1,200,160
0
CTCTTCAGCTTTAATACCCCTTAAGGTAACTTTCAATCCAATAGGTAATTTTTTCCTGATTCCGAATGCAGGGTTAGTTTGTTTTGCTAAAGTCCTTACAGGTGCTTGTCCAGTAAGGTCTTCAATAACCTTAGCCCCAATAGTTAACCT
59Methanococcus voltae A3
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
841,950
1
AACAGATGCTTGAAGGCAGCACGCTCCTTAAGAGTCATCACCACTCCCTAATCTCAAGTACCCAGGGACACAGAAACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAGCCAGGTATTGTCCAAGGTTTCTCCCCATGTGATAGTCTG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
747,450
1
AAGAACGAAAGACAACGGACAAAAAACTGAAGGGACCTGAAATTGGAGTTTCCAGCGTGGACTTTGAATACATGACAGAGAAAAGACAAGGTTCAGAATGTTGGCGGCCAGGCCTAAGGTGGATCCCTTGGGGTCAGGAATTGGAGACCA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,012,000
1
ATCTCATGAAAATACAGGAACTGGCCTCTGGAGAAGCCACAGAGGCATGCCTTTGGTCCCAGCAGTGGGCTACAGCCCTGCCAGCCACCATGCCTGGAACTACCCTGTAGTAGCCTCTGGCTTAAAATCCACTGCGGGTCCCAAACCCTC
120homo sapiens
G000009725
ASM972v1
GCF_000009725.1
PRJNA224116
SAMD00061113
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/725/GCF_000009725.1_ASM972v1
2,514,885,032
RS_GCF_000009725.1
Monoisolate
Complete Genome
Full
representative genome
Major
1,148
1,148
Synechocystis sp. PCC 6803
strain=PCC 6803
null
Bacteria
Cyanobacteria
null
Synechococcales
Merismopediaceae
Synechocystis
Synechocystis sp. PCC 6803
true
Eubacteria
Cyanobacteria
1
0.99
0.9
1
3,947,019
5
47.37
3,573,470
1
3,713
1,164,101
86.890968
99.78
0
0
349
yes
yes
yes
20
high
1,262,560
0
GATCGGCGTTAACCATGGTTCTCTCTCCGAAAGAATGCTTTTTACCTACGGGGATACCCCCGAGGGCATGGTGCAATCGGCCCTGGAATTCATCAAAATTTGTGAGTCCTTAGATTTCCGCAACCTAGTCGTTTCCATGAAAGCGTCCCG
101Synechocystis sp. PCC 6803 ASM972v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,323,200
1
GGGGGCTCGAGGCGAGAATCTCTTCCTTGCCTTTTCACTTCTAGAGATGCCCATGCTCATTGGCTTGTGGTTCCTCCTCCGTTCTCAAAGCTGGCAGCACAGCTCCTTCCAGTCCCTCTCTCTGATCTCTGCTTCTACACCCGCATGTCC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,961,600
1
CAGAGCCGGAGCTGGGGAGTGACTGGAATGCACTTTGGGCTGAACCAGCTATGTCCAGGTGGGAGGGCCAGGTGCACTTCCCCGCCCCCACCGCGCAGGGTGGCTCTCTGCTTAGCTGCCTAGGATTTCCCTACCGCAGCCCTAGGGACC
120homo sapiens
G000009205
ASM920v1
GCF_000009205.1
PRJNA57679
SAMEA1705932
null
2006/09/20
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/205/GCF_000009205.1_ASM920v1
640,069,308
RS_GCF_000009205.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,563
1,496
Clostridioides difficile 630
strain=630
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptostreptococcaceae
Clostridioides
Clostridioides difficile
true
Eubacteria
Firmicutes
1
0.998
0.9
1
4,298,133
2
29.06
4,290,252
1
3,829
1,209,268
82.891874
99.51
0.37
0
340
yes
yes
yes
20
high
2,595,580
0
AAAGGAATACTTATTTTTATGCTTTATTTTTAATGGAGGCTTATATGAACTTAGAAAAAATAAAAAAATTTTTTGGATTTCCTCTAGACAAAAAACACAAAGACAATGTTGAGAAAGAACTCTGCAATTATCTTTATCATACGGGTAAAA
28Clostridioides difficile 630 ASM920v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,581,700
1
AGGCTCAAAATAATTTTGAATTCCAACAGCTTAGATTTTGAATTACTTATTTTCACAATAGGGAGTTCATATCTACGCTCTACCCAGTTCCTTTTATTAGTAACATTAATATGGTACATTTGTCACACTTGATAAACCAACATCAGTAGG
120homo sapiens
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
6,081,920
0
GTGATGGTAAATGCTTCTCATATCATTGGGCAGTCTGGCGCCAATACATTAGTGAAAAAGCAGCTTGAAGAGATCAAAGCAAGCAACAAAACGCTGGTCGTAGACTTCCACCATTTCAATGCAGTGAAAGTACGTCTGCAAGAAGCTGGC
15Brevibacillus brevis NBRC 100599
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,917,200
1
ATAAATTGGCTATTCACCACCCTGAAGAAGTAAATAAAAGGCCAGCCTTCCACGGGAAGATTTAAATCAAGGTTTCCTTTATTCAGGAGAGGGGTGGGAAGAATACTGGATCTGGAGTCAGAAGACTTGGGCAGGGGCTGTCCCTGGATC
120homo sapiens
G000009545
ASM954v1
GCF_000009545.1
PRJNA224116
SAMEA3138207
null
2009/01/28
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/545/GCF_000009545.1_ASM954v1
643,348,578
RS_GCF_000009545.1
Monoisolate
Complete Genome
Full
representative genome
Major
218,495
1,349
Streptococcus uberis 0140J
strain=0140J
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus uberis
true
Eubacteria
Firmicutes
1
1
1
1
1,852,352
1
36.63
1,852,352
1
1,807
559,733
89.025412
100
0
0
291
yes
yes
yes
20
high
44,720
0
TATCAGCTCTGCTATTTATTATGAAAAGGAGAGTCAGAGATGAAGTTAAAAGGTATTAAAAATCAAACAAATTATATAATGGTTCATCTACTATTATTTTTTGCAGGTATTATTATTGGTTATTTGTTTGGACATATTATTGAAGATATA
94Streptococcus uberis 0140J
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,593,300
1
CCAAGTAAGATGTGGGGCGATGTTTTCCAGAAATGCACCAGTCACAGTCCATTTAGTGCCAGGGAAATCAAGTTTGAAGGCGCTGTAATTATCATTATTGACTTTGGATGGTTCTGTGCTGCTATATGCAAAATCTGTAATTTCCTTGAC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,031,350
1
TGATCTTGCGGGCGGGGTGAGAGCAGAGGCAGAGGCCAGGCCTGAAGCCCAGTGCAGGGCCCACGCTGCCCAGCCAGGCCAGCCCTGGAGGAAGGACAGCCTCCTCAGCTGCTTGCCTGCCCTCTGGCCCCCAGGGTCCTCATTTCCGGG
120homo sapiens
G000007985
ASM798v2
GCF_000007985.2
PRJNA57743
SAMN02603989
null
2012/07/31
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/985/GCF_000007985.2_ASM798v2
637,000,120
RS_GCF_000007985.2
Monoisolate
Complete Genome
Full
reference genome
Major
243,231
35,554
Geobacter sulfurreducens PCA
strain=PCA
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfuromonadales
Geobacteraceae
Geobacter
Geobacter sulfurreducens
true
Eubacteria
Proteobacteria
1
1
1
1
3,814,128
1
60.94
3,814,128
1
3,417
1,176,369
90.878544
99.35
0
0
363
yes
yes
yes
20
high
3,162,900
0
GCAGTACTCCTTCCATTCACGTCCATTGCGTCATCTCCGTGGCTCGGTCGGCTCGCTTTCGACCGGCCAGACTGCCGGACAACCCTGCGGCGCCAGGCCTGTTATTTCGTCGTGCTCCACTTCTTTGAGGGCTTGAAGTGGCACCGGACA
43Geobacter sulfurreducens PCA
G000011025
ASM1102v1
GCF_000011025.1
PRJNA224116
SAMD00060968
null
2010/01/05
Department of Bacteriology, Osaka Dental University
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/025/GCF_000011025.1_ASM1102v1
646,311,951
RS_GCF_000011025.1
Monoisolate
Complete Genome
Full
representative genome
Major
680,646
43,675
Rothia mucilaginosa DY-18
strain=DY-18
null
Bacteria
Actinobacteria
Actinobacteria
Micrococcales
Micrococcaceae
Rothia
Rothia mucilaginosa
true
Eubacteria
Actinobacteria
1
1
1
1
2,264,603
1
59.62
2,264,603
1
1,722
637,843
83.000906
99.33
0
0
293
yes
yes
yes
20
high
1,204,840
0
GTCACGCGCGGGGTCACCGCGGCCAAGGCGCGCAGGCTCTTCGCCAGCACCGTGGAGCCCTTCATTTTCGGCTCCAGCTCGGCGGGAATCTCAACCGGCGTGCCGTACAGCTCGGCAAGCTCCACCGCCAGGCGCACATAGTCGCCGCCC
84Rothia mucilaginosa DY-18
G000005825
ASM582v2
GCF_000005825.2
PRJNA224116
SAMN02603086
null
2010/12/15
Center for Genomic Sciences, Allegheny-Singer Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/825/GCF_000005825.2_ASM582v2
646,311,908
RS_GCF_000005825.2
Monoisolate
Complete Genome
Full
representative genome
Major
398,511
79,885
Bacillus pseudofirmus OF4
strain=OF4
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus pseudofirmus
true
Eubacteria
Firmicutes
1
0.995
1
1
4,249,248
3
39.86
3,858,997
1
4,260
1,228,222
85.144124
98.68
1.32
0
377
yes
yes
yes
20
high
1,581,840
0
ATTGTTGTCTCATTTGGTAACAACAATTGAACTGATTTGGGTGTTTTTTTGTTTCTTCAGCGAAAAGTTTGCAAACACTAAGGCAAAGGAGGGAAAAGAATGAAAAGGATTGTCGTAACGATGCTCTTGTTAATCATCATGAGTGGATGC
9Bacillus pseudofirmus OF4
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,359,600
1
TAGTGATACAAATCAAGAAAATATGCTCACTTTTGAAAGCCTGGTGTGCTTGCTGAAAATCTAAGGGAAGGCAGTATATTACAGTGAGTAAAGCCTGGGCTATGGATTAAGACACGGATTCAAATCCCAGCTCGGTCACTAGTTAGGAAG
120homo sapiens
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
3,630,770
0
CCTTGGGCGAGAAGATCGATGATAAATTCAACCGCAATCCTTGTTCCTTTAATGATAGGTTTTCCCACCAAAATATCGGGATTTAGTGTAATTCGAGTTTCCCAGTCCATAGCTACATCATTGAAAGTGTTTTCAAAAAGGTAAAGGCTG
64Microcystis aeruginosa NIES-843
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,348,550
1
AACCCACATGTATTCACACCAACCTCCATCCTTGGGCCACAGCTGGGTTTATCCCAGGTGGACTAGCCTATTCCCTGTCCAGTATTCAAAGGAGCCCCCTAAACAGAAAACCAGATCTTTTCTTATAACCCTTATTTACAAAAACAACAT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,080,450
1
TCATCCTTATTCCCCCGATTGGTGCCCACAGAACCTGTGCTTGGCTGTCAGCAAAGGCGTCAGAAATGGGATGACTCATTTCCTCTCCAATGCCCTGGGGCATTCAGAAAGTCTACTTGTGGAAAAAGTGCTTTAGATAAAATGCAGTTG
120homo sapiens
G000009825
ASM982v1
GCF_000009825.1
PRJNA224116
SAMD00061074
null
2004/12/30
Kao Corporation, Biological Science Laboratories, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/825/GCF_000009825.1_ASM982v1
637,000,019
RS_GCF_000009825.1
Monoisolate
Complete Genome
Full
representative genome
Major
66,692
79,880
Bacillus clausii KSM-K16
strain=KSM-K16
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus clausii
true
Eubacteria
Firmicutes
1
1
1
1
4,303,871
1
44.75
4,303,871
1
4,304
1,270,194
86.940919
98.67
0.33
0
373
yes
yes
yes
20
high
3,081,650
0
TTGGAACAAGAGGGTTAGCTTGGTCCATTTCGTCAGCTACCAAAAGTGGCGATTACCCAAGAAGCCCCCACTTCAAGCAGCCTGTAAGGGTGGTAAGTGGTGGGTAGTTCACCGCAATCTCTTGTAAAATGTTAGTTCCACATACACAAA
8Bacillus clausii KSM-K16
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,432,650
1
TTGCAGTGAGCTGAGATTGAGCCACTGCACTCCAGCCTGGGCGACAAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAGGAAATAAAAGGCATAAGGAATGGAAGGGAAAAATGGTCATTATTTCAGATAAAATGACTCTACATAGAAAA
120homo sapiens
G000007805
ASM780v1
GCF_000007805.1
PRJNA57967
SAMN02604017
null
2003/03/05
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
2,508,501,074
RS_GCF_000007805.1
Multiisolate
Complete Genome
Full
reference genome
Major
223,283
251,701
[Pseudomonas syringae] pv. tomato str. DC3000
strain=DC3000
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas syringae group genomosp. 3
true
Eubacteria
Proteobacteria
1
0.997
0.9
1
6,538,260
3
58.34
6,397,126
1
5,862
1,948,843
87.825109
100
0.22
0
381
yes
yes
yes
20
high
4,451,980
0
GTGTAGACCGGGTCGCCAGGCATATCAGCGGTGAACGTGATCTGGCTGCCATCCCAGGTGCTCATGCCGTGGAAAATGGCCGAAAGGTCCTGCAACACGGCGTAGGCAGCCCCATCGTCTCTGCCTGATATTCAATCGGTGAAAGCCCGA
119[Pseudomonas syringae] pv. tomato str. DC3000
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,453,850
1
GGGATTACAGGTGTGAGCCACAGTGCCCTGTCAACTTTTTTTTTTTTTAAGTTAAGAATGAAGGTCAACAAATTAAGTTGGAAGTAAACCGGGGCTCTTGATAGGTTAAATCTAACACATCCAAGGACACCAGGGTCATTTATACCAACA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,724,950
1
CCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGTGTATCGTCTGAGGTCAGGAGTTCTAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCAACTGAAAATACAAAAATTAGCTGGGCGTGGTGGTGGGTGCCTATAATCCCAGCT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,288,800
1
AGCCTAAAAAGCCTTAAAATTTTAAAGATTTAAAGGCTCATTTATTTAAAACTATAAATAATTGCTAAAGGAAAAATTTGTTTTTTGGGGGAAAAAAGCAGCTATACTCTTACGTAAACTTAACTAATTAATCCTCTCTAGACTTAAGGA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,323,700
1
ACTGTGTGTTGTGCACCTGCATCTTGACTTTGATCCATCACATGAGGTGTGGAATTTTCCACTGTGGTGTCATGTCGGTGCTTAAAAAGTTTCGGATTTTGGAGCATTTCACATTTCAGGTTTTGGGATTAAGAGTATCCAACCTGTACT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,557,800
1
TCACCAACTCTTGCATTCAGAGCTCAAACTGGCAACATACTTGGCCTTTCTAGAAAAACTGCAGTTGAGAAAACACCTCCACTGAGGGGTCATAGGGGAACCGAATATTCACACAGCCTTCAAGAACCTCCCCTGTGATTCCTGGTTAAT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,309,750
1
CACATGCCTTGTAGTGGGATCACACTATGAACTGGAATGTTCACACAGTGAGCTGGGCCCAGAGGCGGCTCTGTCACTTATGAGCTGTGTGATCCTGGGTAAACTCATCTCCTCCCTCTACAAATATCTATGGAGTGACTGTGTTCCAGG
120homo sapiens
G000009205
ASM920v1
GCF_000009205.1
PRJNA57679
SAMEA1705932
null
2006/09/20
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/205/GCF_000009205.1_ASM920v1
640,069,308
RS_GCF_000009205.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,563
1,496
Clostridioides difficile 630
strain=630
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptostreptococcaceae
Clostridioides
Clostridioides difficile
true
Eubacteria
Firmicutes
1
0.998
0.9
1
4,298,133
2
29.06
4,290,252
1
3,829
1,209,268
82.891874
99.51
0.37
0
340
yes
yes
yes
20
high
2,637,180
0
TTAATAATAACGATTCATAAACTTCTGTAAACTTTTCTCTAGGGTATACACTTTCAATATAATCTATCATTTGAGATACTTTACTTTCATGATAATCCTTAGATTTAATGTGTTCTCCCAGGAGCCTTTTTTCTAACCAGTTATTAAATA
28Clostridioides difficile 630 ASM920v1
G000010285
ASM1028v1
GCF_000010285.1
PRJNA224116
SAMD00060935
null
2008/04/17
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/285/GCF_000010285.1_ASM1028v1
642,555,133
RS_GCF_000010285.1
Monoisolate
Complete Genome
Full
representative genome
Major
378,753
72,000
Kocuria rhizophila DC2201
strain=DC2201 (= NBRC 103217)
null
Bacteria
Actinobacteria
Actinobacteria
Micrococcales
Micrococcaceae
Kocuria
Kocuria rhizophila
true
Eubacteria
Actinobacteria
1
1
1
1
2,697,540
1
71.16
2,697,540
1
2,314
807,429
88.19847
98.68
0
0
324
yes
yes
yes
20
high
706,290
0
CCGGCGGCTACCAGGTGGGCAACTTCCCGCCGCAGTGGACCGAGTGGAACGGCAAGTACCGGGACACCGTGCGCGACTTCTGGCGCGGGGAGCCCGCAACGCTTGGGGAGTTCGCGTCCCGCGTGACCGGCTCCGCGGACCTCTACGAGA
51Kocuria rhizophila DC2201