#genome
stringclasses
121 values
asm_name
stringclasses
120 values
assembly_accession
stringclasses
120 values
bioproject
stringclasses
45 values
biosample
stringclasses
120 values
wgs_master
float64
seq_rel_date
stringclasses
98 values
submitter
stringclasses
76 values
ftp_path
stringclasses
120 values
img_id
float64
637M
2.51B
gtdb_id
stringclasses
120 values
scope
stringclasses
3 values
assembly_level
stringclasses
1 value
genome_rep
stringclasses
1 value
refseq_category
stringclasses
3 values
release_type
stringclasses
2 values
taxid
float64
1.15k
681k
species_taxid
float64
7
911k
organism_name
stringclasses
120 values
infraspecific_name
stringclasses
112 values
isolate
stringclasses
1 value
superkingdom
stringclasses
2 values
phylum
stringclasses
18 values
class
stringclasses
30 values
order
stringclasses
56 values
family
stringclasses
75 values
genus
stringclasses
89 values
species
stringclasses
117 values
classified
bool
1 class
lv1_group
stringclasses
2 values
lv2_group
stringclasses
13 values
score_faa
float64
0.93
1
score_fna
float64
0.88
1
score_rrna
float64
0.1
1
score_trna
float64
0.6
1
total_length
float64
618k
9.12M
contigs
float64
1
22
gc
float64
22.5
72.2
n50
float64
616k
9.03M
l50
float64
1
1
proteins
float64
525
7.92k
protein_length
float64
172k
2.68M
coding_density
float64
74
96.9
completeness
float64
76.3
100
contamination
float64
0
4.4
strain_heterogeneity
float64
0
100
markers
float64
124
383
5s_rrna
stringclasses
2 values
16s_rrna
stringclasses
1 value
23s_rrna
stringclasses
1 value
trnas
float64
14
20
draft_quality
stringclasses
2 values
start_position
int64
0
10M
human_label
int64
0
1
autotrain_text
stringlengths
150
150
autotrain_label
class label
121 classes
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
925,650
1
TTAGTTGTTCCTCGGAGGCACCCCTCCTGCTGCTCCTTGGATACTCCAGGGCCGAGGAGCCGAGACTCACTGGAGTGTGGGCATGGCCATCCAGAGAGCTCTGATCAGGCCGGGCGCGGTGGCTCACGCCTGCAATCCCAGCACTTTGGG
120homo sapiens
G000009725
ASM972v1
GCF_000009725.1
PRJNA224116
SAMD00061113
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/725/GCF_000009725.1_ASM972v1
2,514,885,032
RS_GCF_000009725.1
Monoisolate
Complete Genome
Full
representative genome
Major
1,148
1,148
Synechocystis sp. PCC 6803
strain=PCC 6803
null
Bacteria
Cyanobacteria
null
Synechococcales
Merismopediaceae
Synechocystis
Synechocystis sp. PCC 6803
true
Eubacteria
Cyanobacteria
1
0.99
0.9
1
3,947,019
5
47.37
3,573,470
1
3,713
1,164,101
86.890968
99.78
0
0
349
yes
yes
yes
20
high
2,849,990
0
AGCGGGTACCGGCCCTAAACACCCATCCAGTTTTCATCGACGCCTTGGCCCAGATGGTGATGGATTCCCTCAACGATCCTCCCTGCACCTTTGAAACGGTGCCCCATCCCAAAAAGAACATGAAAATGTATCCCCAGGAAAGATGGGAAT
101Synechocystis sp. PCC 6803 ASM972v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,805,650
1
ATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTGAGACAGAATCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGTGTGACGTCGCCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCTA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,787,750
1
TCTGGAGGAAACTAGGCACCCGACCAGGAGGAGACCCAAACCAATTGCAGCCAAAACGGATGCTTGGAGCTTGCCCAGTCCGGGCAGGGCTGCTCCACAGCCTGCACCTGCCTAAACCGTCCCCACACCCCAGGTCCCTGAGCAGCTTTT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,640,250
1
CAAGTGATAGGAAGAGTTGCATATCTCTATGTTGGTGCAAAGGTAGTTGCCGGTTTTGCTATTACTTTCAATGGCAAAACCCGCAATTACCTTTGCACCAAACCAACCTAATATTTTAGATCAAGTGCTGAAAGTGATTATGCTTAGTGA
120homo sapiens
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
3,863,730
0
ATCTACCCAAGGACTCGTGCTAATCATGTGTAACTCCCGTCTCTTGTGCAGGGGTAGGATTTGCTGGTTCTACTGGTGCGGATGTAGCAAGCTGACGGCTTACTAGCTCTTGTAAATCTGTCCCTTCTTTTCTCACACGCAGATCAAAGT
15Brevibacillus brevis NBRC 100599
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,091,650
1
AAACCGAGAGCAGGTGTTCCTGGTAGACACCCCCATGCCGTCAGCATCCCCTCCGCACTGCAGCATGTGCTGACAACCCACAGCCACCAGACAACCCACAGCCACCAGACAACGCGCAGCCACCAGACAACCCACAGCCACCAGACAACG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,190,050
1
TCTCACCCACGCTGTAGCATGTCAGAGCTTCGTTCCTTTTCATGGCCGCGTAATGTTCCATTGCTTGCTGGCACCACATCTCCTGTGCCCGGCCCTCTGCTGATGGGCGTCTGGGCTATGTGCACCGTTCAGCTACCAGGAATGGTGCTG
120homo sapiens
G000007005
ASM700v1
GCF_000007005.1
PRJNA224116
SAMN02603227
null
2002/11/25
European/Canadian Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/005/GCF_000007005.1_ASM700v1
638,154,518
RS_GCF_000007005.1
Monoisolate
Complete Genome
Full
representative genome
Major
273,057
2,287
Sulfolobus solfataricus P2
strain=P2
null
Archaea
Crenarchaeota
Thermoprotei
Sulfolobales
Sulfolobaceae
Sulfolobus
Sulfolobus solfataricus
true
Archaea
Crenarchaeota
0.96
1
1
0.9
2,992,245
1
35.79
2,992,245
1
3,281
874,971
86.125133
100
0
0
196
no
yes
yes
14
medium
812,890
0
CCCTTTGTTAATGCTTTCTTTTACTTCCTTTAATACCTCTTCCTTACTTCTGATAGTTATAAACGCATTAATATATTTGTCATATTTGCCTATTTTCTCATACGTTCTCTCGATGTACTCTTCAGCTTCTAAGTTCTTATTTCTCAAATC
97Sulfolobus solfataricus P2
G000009305
ASM930v1
GCF_000009305.1
PRJNA224116
SAMEA3138199
null
2006/06/28
Penn State Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/305/GCF_000009305.1_ASM930v1
637,000,130
RS_GCF_000009305.1
Monoisolate
Complete Genome
Full
representative genome
Major
382,638
212
Helicobacter acinonychis str. Sheeba
strain=Sheeba
null
Bacteria
Proteobacteria
Epsilonproteobacteria
Campylobacterales
Helicobacteraceae
Helicobacter
Helicobacter acinonychis
true
Eubacteria
Proteobacteria
1
0.994
0.9
1
1,557,588
2
38.17
1,553,927
1
1,547
470,618
89.011857
99.12
0.7
100
271
yes
yes
yes
20
high
180,440
0
AAGATTTTTGACTTAAGCCACAAACTCTAAAAGCCCTCGCATCATAAAAACAGAGAACAAGCACACTAACGCCATAGCGATGATGACCGCATAAATGGGCATGGTGGCGTTTTGGGTGTAAATGTCGCTTTCAGCGTAGCTTTGGGTTTG
46Helicobacter acinonychis str. Sheeba
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,302,200
1
TTCTCTGCAGCAACGAAGCGCAGCAGCTGAGAGTAACTTAGAAAGCACCCAGCTAATGCTGGCATCCCAGATCGACCCCCTCCTCGCTGAATGTTGGCATCTCTGTGCCTCAGTTTCCTCATCTGTAAATGGGGGTGATAAGAAATGTGT
120homo sapiens
G000007825
ASM782v1
GCF_000007825.1
PRJNA57975
SAMN02603340
null
2004/07/06
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1
637,000,017
RS_GCF_000007825.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,900
1,396
Bacillus cereus ATCC 14579
strain=ATCC 14579
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus cereus
true
Eubacteria
Firmicutes
1
0.998
1
1
5,427,083
2
35.29
5,411,809
1
5,541
1,546,426
83.933929
98.18
0.58
18.18
383
yes
yes
yes
20
high
1,952,080
0
GCCTGGCATGAGGGAATTGCAACTTTGGGAAGGCAGCGAAGCGATTCAAACAGCATTCTCTGATATTGAAGAATTTGCGACAACATGTCGTTTCCGTGATTGTAAGCATGAGAATGAACCAGGATGCGCGGTGTATAGTGCAATTGAAAA
7Bacillus cereus ATCC 14579
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,685,050
1
GCCAGTGAGCCATGAGGTCTTGAGCAAGGCCGCCCCTCTGTTAGAAGTCCCCTTCTCTATGCCTCATGGTTCCACAGCCTGGGGTACCCCAGCTCCAAATGACACATCTCCCTGCGTTTGCTGTGCACGTGCCTGGGTGTGGGTGATGCT
120homo sapiens
G000008165
ASM816v1
GCF_000008165.1
PRJNA58091
SAMN02598266
null
2004/06/24
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/165/GCF_000008165.1_ASM816v1
637,000,015
RS_GCF_000008165.1
Monoisolate
Complete Genome
Full
reference genome
Major
260,799
1,392
Bacillus anthracis str. Sterne
strain=Sterne
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Eubacteria
Firmicutes
1
1
1
1
5,228,663
1
35.38
5,228,663
1
5,471
1,495,624
84.251844
99.23
0.15
0
381
yes
yes
yes
20
high
2,143,180
0
TGGAAATGGGTATGGGCGTAGAAGTGAGAGATAAAATTGCTAGACGTGCGGCGAAAGAAATACAGAATGGAATGATTGTAAATTTAGGTATTGGTATACCATCGCTTGTACCAAATCATTTGCCTGACGATATAAACGTTATGTTTCATG
6Bacillus anthracis str. Sterne ASM816v1
G000007745
ASM774v1
GCF_000007745.1
PRJNA224116
SAMN02603473
null
2004/09/17
Korea Advanced Institute of Science and Technology, Republic of Korea, Yuseong-gu
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/745/GCF_000007745.1_ASM774v1
637,000,156
RS_GCF_000007745.1
Monoisolate
Complete Genome
Full
representative genome
Major
221,988
157,673
Mannheimia succiniciproducens MBEL55E
strain=MBEL55E
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pasteurellales
Pasteurellaceae
Basfia
[Mannheimia] succiniciproducens
true
Eubacteria
Proteobacteria
1
1
1
1
2,314,078
1
42.54
2,314,078
1
2,120
690,147
87.871627
100
0
0
329
yes
yes
yes
20
high
849,550
0
TGGTAAATTTTGAATTTCATCCTACAAGCTATCGCAATCAGTTGGAAAATATGATGCGACTGGTCGCGAAGCATCAAGGACCGATTATTTTGGCGGGTGATTTTAACAGCTGGAACCAGCCGCGTTTAAATTTGGTTCGCCGTTTTGCGA
57Mannheimia succiniciproducens MBEL55E
G000008465
ASM846v1
GCF_000008465.1
PRJNA224116
SAMN02604184
null
2004/12/02
University of Hawaii at Manoa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/465/GCF_000008465.1_ASM846v1
637,000,136
RS_GCF_000008465.1
Monoisolate
Complete Genome
Full
representative genome
Major
283,942
135,577
Idiomarina loihiensis L2TR
strain=L2TR
null
Bacteria
Proteobacteria
Gammaproteobacteria
Alteromonadales
Idiomarinaceae
Idiomarina
Idiomarina loihiensis
true
Eubacteria
Proteobacteria
1
1
1
1
2,839,318
1
47.04
2,839,318
1
2,658
892,961
92.667007
100
0.17
0
344
yes
yes
yes
20
high
169,650
0
GGTGTTGTCGATGATTGCTATGGTTACTCGGCTATAACATCCAGCGGTGATCCAATGGATGAAAACGGCCATGGCACGCACGTTGCCGGAACCATTGGTGCAACATCAAACAATGGCGTGGGCGTTACCGGGGTTAACTGGGATGTGCAA
50Idiomarina loihiensis L2TR
G000007325
ASM732v1
GCF_000007325.1
PRJNA57885
SAMN02603417
null
2002/04/09
Integrated Genomics
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/325/GCF_000007325.1_ASM732v1
637,000,117
RS_GCF_000007325.1
Monoisolate
Complete Genome
Full
reference genome
Major
190,304
851
Fusobacterium nucleatum subsp. nucleatum ATCC 25586
strain=ATCC 25586
null
Bacteria
Fusobacteria
Fusobacteriia
Fusobacteriales
Fusobacteriaceae
Fusobacterium
Fusobacterium nucleatum
true
Eubacteria
Bacteria
1
1
1
1
2,174,500
1
27.15
2,174,500
1
2,022
670,780
90.88917
99.95
0
0
297
yes
yes
yes
20
high
57,330
0
CAAAATTAGCTTTGGATTGCAAAAGAATTGGAAACAGGAATTAGTTGATAAAATTGTTGAAGAAACTCCTAAAAATAGTGACTTTTTAGATGTATGCTGTGGTACAGGAGATATTTCTATTTGGCTGGCAAAAAAAAGAGAAGATTTGAA
41Fusobacterium nucleatum subsp. nucleatum ATCC 25586
G000008745
ASM874v1
GCF_000008745.1
PRJNA57811
SAMN02603115
null
1999/12/22
ChGP
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/745/GCF_000008745.1_ASM874v1
637,000,069
RS_GCF_000008745.1
Monoisolate
Complete Genome
Full
reference genome
Major
115,713
83,558
Chlamydophila pneumoniae CWL029
strain=CWL029
null
Bacteria
Chlamydiae
Chlamydiia
Chlamydiales
Chlamydiaceae
Chlamydia
Chlamydia pneumoniae
true
Eubacteria
Chlamydiae
1
1
0.9
1
1,230,230
1
40.58
1,230,230
1
1,063
373,983
89.578859
99.49
0
0
219
yes
yes
yes
20
high
1,080,950
0
GGTAGGGAAATACTTCTGGTGATTTACCATCTCAGCTATAAGTAACTCTTTCGGTAAAGCACAAAATTGCTCGGAAAATTGCCCACAAGAGACAAAAGGGTGCTCCGACAGGAAGGTAGCTTCTTCAATTAAACGGGGAAGAGGAATCGC
24Chlamydophila pneumoniae CWL029
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
5,517,330
0
TTCCTCTGTCGTCCAACTAATTTTATCTTCGGCATCAAGCAATAAAATTGCATTTTCTGGGGGTTCTTGGGGCGTAAATAGGCTTAAACTCGGTGGATTCTCACTCTCAGGCTTTTTCTTAACTTTATTCTCCTGCTTTTTAACTTCTGC
64Microcystis aeruginosa NIES-843
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,190,600
1
TGGCTCACGCCTGTAATCCCAGCGCTTTGGGAGGCCGAGGAAGATGGATCACGGGGTCAGGAGATCAAGATCATCCTTGCTAATGTGGTAAAACCCTGTCTCTACTAAAAAATACAACAAAAATTAGCTGGGTGTGGTGGCGGGCGCCTG
120homo sapiens
G000007745
ASM774v1
GCF_000007745.1
PRJNA224116
SAMN02603473
null
2004/09/17
Korea Advanced Institute of Science and Technology, Republic of Korea, Yuseong-gu
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/745/GCF_000007745.1_ASM774v1
637,000,156
RS_GCF_000007745.1
Monoisolate
Complete Genome
Full
representative genome
Major
221,988
157,673
Mannheimia succiniciproducens MBEL55E
strain=MBEL55E
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pasteurellales
Pasteurellaceae
Basfia
[Mannheimia] succiniciproducens
true
Eubacteria
Proteobacteria
1
1
1
1
2,314,078
1
42.54
2,314,078
1
2,120
690,147
87.871627
100
0
0
329
yes
yes
yes
20
high
1,854,970
0
AATTTGTGTTAAATAAATTTGCGGCATTGCATATTGAAAAGCAATTTTTAATCGTTGTCCGTAAGTGATTTGTTTTTTTTCTAATGAATTCATAATGTTATATTCACCTAACATATAAAGTTTTAACTTATCCGTTAATAAGTCGATGGG
57Mannheimia succiniciproducens MBEL55E
G000007985
ASM798v2
GCF_000007985.2
PRJNA57743
SAMN02603989
null
2012/07/31
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/985/GCF_000007985.2_ASM798v2
637,000,120
RS_GCF_000007985.2
Monoisolate
Complete Genome
Full
reference genome
Major
243,231
35,554
Geobacter sulfurreducens PCA
strain=PCA
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfuromonadales
Geobacteraceae
Geobacter
Geobacter sulfurreducens
true
Eubacteria
Proteobacteria
1
1
1
1
3,814,128
1
60.94
3,814,128
1
3,417
1,176,369
90.878544
99.35
0
0
363
yes
yes
yes
20
high
1,655,420
0
TTTATCACAAATAGGCTATTTCCCCTATTTCAATTTGAACAGCCTGCTTGGCTTGATTTCTTGGCTGGAAGAATCTGATGACTTTGATCGGTAGCGGGATGTCCCACCATAATCCTCTGGTTTCTGTCGTCATTCCGAGCAAGAATAGAC
43Geobacter sulfurreducens PCA
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,842,550
1
GCCGTAGGGAAGTGCTGCTTGGTGGGGGGCAGGGGCCACGCGGGACCTGAGTACTTTCTGCTCGGCTGCATGTACATTTCATTTTCCTTCAGAGCATATGCATTTCACTAATGGGGAGATTTTAAGTGAAGACCTTATTACTCCAGTGAA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,038,200
1
TCTGCTGGCTGTGCCCTGGAAGCTGGCCTCTGTTCCTTTGTGTCTTCACGTCCATAGATGCTCTTCCTGAACCAAGACCGTGCCCTTCCTACAAACTCTGAATTGACCTGTCTGCTCCCTGTTATCAGGAACTCTCTACCCTATCCCAGT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,937,050
1
GGGTCTTTGCAGATCATCAGGTTGACAAGAGGTCACTGAGGTAGGCCTTACTCCAATAAGAAATGTCAAAGGTCAATGTCAAAGGATAAATCAAGTGTGTAAGGTCAATGCCAAAGGACAAATCAGATGTGAAAGGTCCATGTCAAAGGT
120homo sapiens
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
6,379,360
0
GGTCCGCCTCGATCCGTTCGAAGATCGTCGCGTTCACCAGGCCCTGGGCCTGGAGTTCGCGGTGGCGGCGACGGACGTATTCCTCGGTCGTCTCGTCGAAGTAGGCGAGCACGTCCTGGATCACCCGCAGCGCCTCGCCCCGGTTGAGGG
95Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,576,300
1
GGGTAGGAAGGAGAGCAGGATCTGCTGTAGGAACGCAGCTACCGCGCCACTATCACGAAGAAACAGCAGGCTCGGGGCACGAGACGAACTGGAGACCGCGCTGCCTAGCTGGGTAACCTGGGAAGCAGAGGGTAATAAGTGGCGCCTTAA
120homo sapiens
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
1,569,100
0
GTCACGACGGGAAGCTTGCAAGCCGGATCGCCATAGAGCTGCAATCCCATCGCCAACACACCAGCGACCAAGGCTTGTTCATGCAAGCGATGTCTGGCAAATCTCGCCTCCAGACCTTCCGTGAGGGCGATGCGCACTCCTTCGCGCAAG
15Brevibacillus brevis NBRC 100599
G000010305
ASM1030v1
GCF_000010305.1
PRJNA224116
SAMD00060909
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/305/GCF_000010305.1_ASM1030v1
643,692,024
RS_GCF_000010305.1
Monoisolate
Complete Genome
Full
representative genome
Major
379,066
173,480
Gemmatimonas aurantiaca T-27
strain=T-27
null
Bacteria
Gemmatimonadetes
Gemmatimonadetes
Gemmatimonadales
Gemmatimonadaceae
Gemmatimonas
Gemmatimonas aurantiaca
true
Eubacteria
FCB
1
1
1
1
4,636,964
1
64.27
4,636,964
1
4,004
1,466,180
93.177023
98.9
4.4
0
353
yes
yes
yes
20
high
1,057,420
0
TTCCATGGCCCGTTCGGGTCATGGTGGCCCCGGTGGTGGCAAGCCGCACTTCGAAGGCGGTCAGATGCCGATCACGCGTCGGATCCCGAAGCGGGGTTTCACCAATCCGTTCCGTGAAGATGCACAGGTCGTGCGCCTTGACTCGCTGAC
42Gemmatimonas aurantiaca T-27
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,346,400
1
GCACTGTAGGCAACCTCCAGGGAAGAGCTGATGTTGCAGCCGTCTGGAGGCAGAATTCCTTCTTCCTTGGGGGACCTCAGTCTTTTCTCTTAAGGTCCTCAACTAACTGGATGCGGCCCCCCCCTACATTATGGAGGGTCATGTGCTTTA
120homo sapiens
G000007345
ASM734v1
GCF_000007345.1
PRJNA224116
SAMN03081414
null
2002/04/03
Broad Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/345/GCF_000007345.1_ASM734v1
638,154,508
RS_GCF_000007345.1
Monoisolate
Complete Genome
Full
representative genome
Major
188,937
2,214
Methanosarcina acetivorans C2A
strain=C2A
null
Archaea
Euryarchaeota
Methanomicrobia
Methanosarcinales
Methanosarcinaceae
Methanosarcina
Methanosarcina acetivorans
true
Archaea
Euryarchaeota
0.98
1
0.8
0.9
5,751,492
1
42.68
5,751,492
1
4,884
1,470,904
75.340086
99.84
0.03
0
229
no
yes
yes
18
medium
5,516,680
0
CTGACCTCTCTCGGCAGCCTCGCTTATGTAATAGGGAATCCTAGGGAAGGAGAATCATTCACCGAATTCTATATCCTGGGACCCGAAGGGATGGCTGAGAACTACCCCACAAACTACACACTGGGAGACAGTGGTATAGTTGTTGTAGGA
61Methanosarcina acetivorans C2A
G000007825
ASM782v1
GCF_000007825.1
PRJNA57975
SAMN02603340
null
2004/07/06
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1
637,000,017
RS_GCF_000007825.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,900
1,396
Bacillus cereus ATCC 14579
strain=ATCC 14579
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus cereus
true
Eubacteria
Firmicutes
1
0.998
1
1
5,427,083
2
35.29
5,411,809
1
5,541
1,546,426
83.933929
98.18
0.58
18.18
383
yes
yes
yes
20
high
911,170
0
TTTGCAACACAAAAGATGGTAGCAATTGTATTAATGTGTGTATACTCCATGTTTTCGTTTATTTTGTTTCATTTCATTATGGAACTCCATAGGTACTATTATTTAAGGAAGCATATAGAAGATGGGGGAAAAGATAGTGATAAATAGGGA
7Bacillus cereus ATCC 14579
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,076,900
1
GAAACCACTCATCCATACAAGGTGATTTAATCCCCGAAAGCCAGAAGAAATAGGTTCCTTTAGCAGTAAAATAGAGATAACACCTACTGCACTTATAAAGACAAAGCCTACAAAACTCTACTACACAATGCTATGTAAAGTAAGTTATTC
120homo sapiens
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
5,278,390
0
TTCGCCTGGCGCATGTTCCGCTACTGAGAGGGGTGAGAGATGTTTGATACTGCCCTCACCTGGAACGACCTCGCCTTTCTTGCGCAAGGCGCCGGAATGACGCTGGCGGTAACCGCCGTCGCCGTCACCGCCGGCACCGTTCTCGGCATC
86Sinorhizobium meliloti 1021
G000008505
ASM850v1
GCF_000008505.1
PRJNA58089
SAMN02598265
null
2004/12/27
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/505/GCF_000008505.1_ASM850v1
637,000,023
RS_GCF_000008505.1
Monoisolate
Complete Genome
Full
reference genome
Major
281,309
1,428
[Bacillus thuringiensis] serovar konkukian str. 97-27
strain=97-27
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus thuringiensis
true
Eubacteria
Firmicutes
1
0.998
1
1
5,314,794
2
35.37
5,237,682
1
5,361
1,516,528
84.049767
99.07
0.31
0
381
yes
yes
yes
20
high
3,352,440
0
CCTCCATTACAGAATCCTTTGGCTCTAAATCCCCACATACATAAGTAATATTTTTATACTGGTTAAGCCATTCTCTTACCTTTACTTCAGGTGCAATATGAAGCATTGTATAATTCTCACTTAACAAATCCGTTTCCGTTTCAATGTACG
118[Bacillus thuringiensis] serovar konkukian str. 97-27
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,325,350
1
GCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTACTGTGAGCCAAGATCACGCCATTGCACTGCAGCCCGGGCGACACAGTGAGACTCCGTCGCAAACAAGCAGACAAACAACACCGAGCAGAGCATATTCTTAAAGGTTCCTGGTAG
120homo sapiens
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
4,355,260
0
ACAGTTATCGCTTTTTTGACCATTAATAATTTAATTCGGAGTCTGATTACTGTCAGCATGGATTCCCAGAAACGTCCTGCTAAATCGGCTAATTCCTATAATCCCTACGGTTATCCCATGACTTCCCATCCCGAACTTTTGGACGAGGCC
64Microcystis aeruginosa NIES-843
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,842,100
1
TGTTACCAACAGAGGCTCTTTAGGAGGCCTTTTTAGCATTAAGTTTTTAATGAAAACGGAAAGAACTAGCTACAATGTGATTAGTGGCTTGAAAGGTTTGTGACACAAGAAGATGTCTTTTATCTTAATAATGTAGTACATTCTAATAAC
120homo sapiens
G000007465
ASM746v2
GCF_000007465.2
PRJNA57947
SAMN02604090
null
2011/09/01
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/465/GCF_000007465.2_ASM746v2
637,000,288
RS_GCF_000007465.2
Monoisolate
Complete Genome
Full
reference genome
Major
210,007
1,309
Streptococcus mutans UA159
strain=UA159
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus mutans
true
Eubacteria
Firmicutes
1
1
0.9
1
2,032,925
1
36.83
2,032,925
1
1,897
591,301
85.692487
100
0
0
308
yes
yes
yes
20
high
597,610
0
CGTTTGTAAGCCAGCTAAGTTACAGATTATCAGTTCTAGTTCAGAAGTCAGTCGTGCCTATATTACGATTACCGAAGGGAAATTTCATCAAGTCAAAAAAATGTTTCTGGCTTATGGTGTTAAAGTTACCTACCTCAAACGAATCTCTTT
92Streptococcus mutans UA159
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,813,000
1
GGAAGCACCATTCATTCAGTTGTGCAAGTCATAAGGCTGGTAGTATTTCCTGATACCTTCTTAGCCCTCTATCACCCCCTTGTCCAAATAAACTCCATTCCCTTTTCCTCTGGGAGCTGTAAAATCCAACCTTTTCCTCTATCCATCTCC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,241,750
1
TCACAACATCTGATGGTTGCTTTTTTGTTTTTGTTTTTGTTTTTGTTTTGAGGCGGAGTCTCACTCTGACCCCCAGGCTGGAGTGCAGTGGCATGATCTCAGCTCACCGCAACCTCTGCTCACCACAACCTCCACCTCCCAGGTTCAAGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,592,750
1
CAGAACCCCAAAGCCTCTGACTTTGAACTTGGCTGCACCACGGCCTGACCCCAGATTGAAAGGGGCCAGGTCTTTGCCTGGGCATTGGCCCCTGAAGCCCATGCCAGGCATCTGATTTAGGTTCCCAGGAGCAGCAGCTGACACTCCTGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,421,550
1
CCATGGCTGCACTAGCCCCTCCAGGTCGGGCACCCTGCTGGGGCCTTCCAGGGCTGGGCTGAACTCGGCAGGCCCTGCAGGCACCTGGTGCCCCCAGAGGGTGAGGCGAGGCCAGAGCTGCAGCCGTGGAGCCATCCAGGCTCCCGGAGC
120homo sapiens
G000005825
ASM582v2
GCF_000005825.2
PRJNA224116
SAMN02603086
null
2010/12/15
Center for Genomic Sciences, Allegheny-Singer Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/825/GCF_000005825.2_ASM582v2
646,311,908
RS_GCF_000005825.2
Monoisolate
Complete Genome
Full
representative genome
Major
398,511
79,885
Bacillus pseudofirmus OF4
strain=OF4
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus pseudofirmus
true
Eubacteria
Firmicutes
1
0.995
1
1
4,249,248
3
39.86
3,858,997
1
4,260
1,228,222
85.144124
98.68
1.32
0
377
yes
yes
yes
20
high
1,563,380
0
TTTAAAGTAAGCGTTTTCATCAAAAGATCTACCTATTTAAAATTTGCCGAAATGTCAGAAAAATGATATGATCCTGTATATTAGCTCGAATGGTTTATGGGGAGAGTTGATTGAATTTACTTTTTGGAGAAAGGTTGGGTGCTAATGCAG
9Bacillus pseudofirmus OF4
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,476,750
1
CATCCTGCCCTCATCTCCAGGCCGGCTGCGGCTTCCAACGCTTCTCCGACACCCAGCCTGTGTTGTGCTTCCCTCTCCAGCAGCCAAGAGCTCCTGAGGGCTTCTCTTTCTCTTCCTCACCTTTTACTCTTGATCTTGTTTAATTTCATG
120homo sapiens
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
5,624,190
0
CTCGTGGACGCGGATCCGCTGGGCGGCGGACTCGACGTACTCCTCGGCGGCGAGACAGCCGAAGGGCTGCGCTGGCCGGCGTTCGCCGCCTCCCGTGGCCGGGTCGGCGGCGGCGCCCTGGAGGAGTCCCTGCCCGAACTGCACGCGTTA
95Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,163,250
1
ACAAGATGAGTACATACTCTCACCTCTACTCAGGGCTCAGTCAGCAAGATGAGTACATACTCACACCTCCTGTACTGAGGGCTCAGTCAACAAGATGAGTACATACTTCCAACTCCTGTACTCAGGGCTCAGTCAACAAGATGAGTACAT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,491,700
1
GACCAACCCCTCTGTCCATTAGGGCCCCGCCTTCATTTGACCCATCCCACCCTCTGGCCTCACCCACTCCACCTTCCATTTTGACCCAGCTCCTTGGCAGGCTCCAGCCTCCATCTCTTTTGGCTCCTCCTCACCCGCCCCGCCCCTTTG
120homo sapiens
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
1,160,900
0
CCTTGATCGGCCATTAGCCCTTCAAGGTCTTTTTTGTTGTGCCCTTTTCCCGATTCACACGTCTTCTATAATAACTCACCAATACTTGGTAAAAAAGGAGCAGCATGACTATGCATGTACCCGTCGTCTACTCAACCATCTGTGAAAAAG
15Brevibacillus brevis NBRC 100599
G000010585
ASM1058v1
GCF_000010585.1
PRJNA224116
SAMD00060930
null
2009/01/28
Juntendo University School of Medicine
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/585/GCF_000010585.1_ASM1058v1
643,348,562
RS_GCF_000010585.1
Monoisolate
Complete Genome
Full
representative genome
Major
458,233
69,966
Macrococcus caseolyticus JCSC5402
strain=JCSC5402
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Macrococcus
Macrococcus caseolyticus
true
Eubacteria
Firmicutes
1
0.965
1
1
2,219,737
9
36.56
2,102,324
1
2,352
677,409
89.896055
96.13
1.1
0
339
yes
yes
yes
20
high
1,716,000
0
GCGCCTTCATATTTAAGCATTATGCATTTACAAAAGCACGCATTAATGATGTTGATAATGCTGTGAAATATATGAATAAAGCAAAATCAATCTATGCTGATAATGATGATATAAATGAATTAATCGAGGTTGAAAGAGATTACGCAAGCA
55Macrococcus caseolyticus JCSC5402
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
258,450
1
AAGTGTATTGTGGGGGTATATTATGTAGGTGTGCCATGCAGGTGTATTGTACAGGTGTGCTGTATAGGGGTGGTATGCAGGTATATTGTGCAGGTGTGCTGTGTAGGTGTATTATATGGGCATGCAGTACAGGTGTGCAGCATCTGAGCT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,785,350
1
GGCATTCTGGACTGTCAAGAAGCTTGAGAAACTGGGCCCTAGGAGGATGCTGCAAGATGCCCAGATGTCCTCTTCAACTCGAAACGTTGCCATCTGCCTTGCTGGCTCACACCCAGCCCCTACCTGAGAACGCAGCTGTGGGCACTGTCG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
306,450
1
TCTGAGATGGCCTTGCATGGACCTGGTTGGGAAGGTTCAGCTACAGCAACCACTGGAACCTGCCCACACCTAGTGTCTCCACTCACACGTGGGGCTAGATGTTCCTCCCTCCCGTAGTGGCACAGCCAGTGGCAGAGGGGGCAAGTCACC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,405,850
1
GAGCTGAGGCTGGAAAGGGAGTGCCCGTCCTACCAAGGGAGCCAGGCAGGTCTCCGAGCTGCTCTACCTGAGTTCAGCCCCTCTACATCCCAGGGAACAGCGCCTGGATTTTGGAAAGGACCTGAAAGCCAGATACTGAATCGCAGCTGG
120homo sapiens
G000006985
ASM698v1
GCF_000006985.1
PRJNA57897
SAMN02604006
null
2002/07/02
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/985/GCF_000006985.1_ASM698v1
637,000,073
RS_GCF_000006985.1
Monoisolate
Complete Genome
Full
reference genome
Major
194,439
1,097
Chlorobium tepidum TLS
strain=TLS
null
Bacteria
Chlorobi
Chlorobia
Chlorobiales
Chlorobiaceae
Chlorobaculum
Chlorobaculum tepidum
true
Eubacteria
FCB
1
1
0.8
1
2,154,946
1
56.53
2,154,946
1
2,009
639,065
87.375415
98.9
0.55
0
334
yes
yes
yes
20
high
761,930
0
TCGGTCATGGTGTTCAATCAGCCGGAGTTAGGCCTCGTCATCAACTGGTGGGTTTTTCTTCCGCTTTTTCTTTCATTTTCGGCGGGAGTCCTGTTACTTGTCTTTGTGGTGTTTCGTTCTACCAGACGCAAGGCGATCTCCGGCAGGGAG
26Chlorobium tepidum TLS
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,727,000
1
CTGAGGTGAGAGAATTGCTTGAACTGGGAGGCAGAGGTTGCAATGAGCAGAGATTGCACCACTGCACTCCAGCCTGGGCACTAGAGTGAAACTCCATCTCAAAAAAAAAAAAAAAAGGAAAGGAAAAAGAAAAAAGAAAAGCACCCAGAT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,206,200
1
AGGTGAGCATCTGACGGCCTGGAACAGCACCCACACCCCCAGGTGAGCATCTGACATCGTGGAGCCGCACCCCACACCCACAGGTGAGCATCTGACAGCCTGGAGCAGCACCCACACCCCCAGGTGAGCATCTGACAGCCTGGAACAGCA
120homo sapiens
G000005825
ASM582v2
GCF_000005825.2
PRJNA224116
SAMN02603086
null
2010/12/15
Center for Genomic Sciences, Allegheny-Singer Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/825/GCF_000005825.2_ASM582v2
646,311,908
RS_GCF_000005825.2
Monoisolate
Complete Genome
Full
representative genome
Major
398,511
79,885
Bacillus pseudofirmus OF4
strain=OF4
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus pseudofirmus
true
Eubacteria
Firmicutes
1
0.995
1
1
4,249,248
3
39.86
3,858,997
1
4,260
1,228,222
85.144124
98.68
1.32
0
377
yes
yes
yes
20
high
2,124,330
0
CATCCAAACAAAAGCAGAACTAAATCCGATCGCCGCAAAACGTTGATAGGAAATAGCTGACAACCCTACACTAAATGGCACCGCATGCCTGATAAAAGGAAAAAAGTAACTAAACGATGCTGCCTTTAATCCATAACGATCAAGCAGCTC
9Bacillus pseudofirmus OF4
G000009125
ASM912v1
GCF_000009125.1
PRJNA224116
SAMEA3138192
null
2003/05/06
Genoscope
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/125/GCF_000009125.1_ASM912v1
637,000,231
RS_GCF_000009125.1
Multiisolate
Complete Genome
Full
representative genome
Major
267,608
305
Ralstonia solanacearum GMI1000
strain=GMI1000
null
Bacteria
Proteobacteria
Betaproteobacteria
Burkholderiales
Burkholderiaceae
Ralstonia
Ralstonia solanacearum
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
5,810,922
2
66.98
3,716,413
1
5,062
1,725,241
87.482692
99.94
0
0
373
yes
yes
yes
20
high
941,070
0
TCTTCTGAATGTCGCTCAATGCCTCATGGTCACAGCAGGCTTGAGCCCTGACGCGCTTCTAAGCCAAACGCTCAGGATGTTTTGCGGCACTCCCAGGTCGCAGTGAAAATACGGAGACTTGGTCCAATAGGGGCGGAGACTTGGTACGTG
81Ralstonia solanacearum GMI1000
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,823,900
1
TTTGCTGGCTGCTTGGGGAAATCGAAGCCTAGGGGTCCACTAACTTCCCCAGAAGGCTCAGCCCAGGTCTGCTGGCCTCCAATCTGGGGCTCTTTCCTCTGTGCCACCCAGCCACCCACACAGCCCTGGAAGCCATTGTTCACCAGCAGG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,366,700
1
CGTAGAGATGGAGGTTCTGAGACCTCACTCAGGGCATTGGCCTAGGTGCTGGGGTTCTCCTGGCAGCTCTGGGTCTGAGACCCTGGACGAGGCTGGCCTAGAGAGGCAGCTACTGCAGAAAGGCGAACTCCTGGGAATCTGGCTGCCCAG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,160,850
1
GGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACAGCACCCTGCCCTTTTTTTTGAGAAATAAGTCTCACTGTGTCACCCAGGCTGGAGTAGAGTGACACAATTTTGGGTAACTGCAGCTTCCACCTCCCAGGTTCAAGTGATTCTC
120homo sapiens
G000009125
ASM912v1
GCF_000009125.1
PRJNA224116
SAMEA3138192
null
2003/05/06
Genoscope
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/125/GCF_000009125.1_ASM912v1
637,000,231
RS_GCF_000009125.1
Multiisolate
Complete Genome
Full
representative genome
Major
267,608
305
Ralstonia solanacearum GMI1000
strain=GMI1000
null
Bacteria
Proteobacteria
Betaproteobacteria
Burkholderiales
Burkholderiaceae
Ralstonia
Ralstonia solanacearum
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
5,810,922
2
66.98
3,716,413
1
5,062
1,725,241
87.482692
99.94
0
0
373
yes
yes
yes
20
high
348,140
0
TCGGGCTGGATCGACACCGGCGTGTCGCCGTTCGCTTACCTGAGCGCGCCGCTGCCGCGCTACAACACGCGCTTCGATCTGCTGACCAACATCTGGGGCTACCTGCCGCTGGGCATGCTGGTGGTGCTGTCGCTGCATCCGCGCGTCACC
81Ralstonia solanacearum GMI1000
G000007805
ASM780v1
GCF_000007805.1
PRJNA57967
SAMN02604017
null
2003/03/05
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
2,508,501,074
RS_GCF_000007805.1
Multiisolate
Complete Genome
Full
reference genome
Major
223,283
251,701
[Pseudomonas syringae] pv. tomato str. DC3000
strain=DC3000
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas syringae group genomosp. 3
true
Eubacteria
Proteobacteria
1
0.997
0.9
1
6,538,260
3
58.34
6,397,126
1
5,862
1,948,843
87.825109
100
0.22
0
381
yes
yes
yes
20
high
4,641,260
0
GCTTTTTAGCCGCAGCGGTGGTGGTCTTGGCAGGCGCAGCCTTTTTGGCGGTGCTGGCCTTGGCCGGCGCTTTCTTGGCAGTGTCTTTCTTCGCCACGGCGGCTTTCTTGGCAGGCGCGGCAGCAGGTGCTGGCGCTACTGGCTTGACGT
119[Pseudomonas syringae] pv. tomato str. DC3000
G000010665
ASM1066v1
GCF_000010665.1
PRJNA224116
SAMD00060954
null
2009/06/11
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/665/GCF_000010665.1_ASM1066v1
644,736,352
RS_GCF_000010665.1
Monoisolate
Complete Genome
Full
representative genome
Major
573,370
184,917
Desulfovibrio magneticus RS-1
strain=RS-1
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfovibrionales
Desulfovibrionaceae
Desulfovibrio
Desulfovibrio magneticus
true
Eubacteria
Proteobacteria
0.99
0.996
1
1
5,315,620
3
62.67
5,248,049
1
4,555
1,546,858
85.744052
100
0
0
357
yes
yes
yes
20
high
1,878,370
0
AATCTGGTCTGGCTTCTCGACGCCCAGGAGGCGCTGTCCGACCGTTTCGCCATCGACAACGCCGCCTTGCCCGAGGATTTTTTCGAGGTTACGGCGTCCTGCTCCCGGCGCTGCGCCGCCTGCCGTTACTGCGACGAACTGGCCGAGCGG
36Desulfovibrio magneticus RS-1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,475,750
1
AATGACTGGCTCTCCGAGGGCCAGGTGGCCACCCTGACCTTGGAGGTGGTCAGCAAAGCTTTGACCTTGGCCAGAAAGGAGGACACTGGCAGAGTCCTGGGTTGGGGAAGGCCAGGATGCATCACACTTACCTGGTGGATGAGTCACACT
120homo sapiens
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
6,104,540
0
TTCTCCATCGCTACTTGTGCCAATTAAATCAATTCCTGTTGATGCTTGAAGGTTAATTTCTCCACCAGGAAGATAGCCATAATTTTGTGCAAGTATCAATGAACCATCTGTTAAACGGATATTTCCGGCTTGTAAACGAACAGAACCTGA
70Nostoc sp. PCC 7120 ASM970v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,221,600
1
AGGCATTCTGGTTTTCATTCCCACCAACAGCATACTAGGTCTCTCATCTCCTCGTGTCCTCGCCAGCACTTCATGTTCTCTGTCTTTCTGCTTGTAGCTCTCTCTGTGGGTGTGATGTGGGCGGTATGTTTTTTTTTTGTTTTTTTTTTT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,171,800
1
ACCTCGCCACTGCACTGCAGCCTGGGCGACAGAGCAAGACCCTGTCTCAAAAACATAAAAAAAACAAAAGAAAAAAAACAAAAAAAAACCAGAGTTGACTTTTAGGCTTTGATTTTGTTATAATCACCTAAACGTGTGTGCGGGTCTCAA
120homo sapiens
G000010525
ASM1052v1
GCF_000010525.1
PRJNA224116
SAMD00060925
null
2007/10/16
University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/525/GCF_000010525.1_ASM1052v1
641,228,476
RS_GCF_000010525.1
Monoisolate
Complete Genome
Full
representative genome
Major
438,753
7
Azorhizobium caulinodans ORS 571
strain=ORS 571
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Xanthobacteraceae
Azorhizobium
Azorhizobium caulinodans
true
Eubacteria
Proteobacteria
1
1
0.9
1
5,369,772
1
67.32
5,369,772
1
4,810
1,620,542
88.922714
100
0
0
358
yes
yes
yes
20
high
3,709,290
0
GCTCCCCTGCCCGACTGACGCCAGGGCCGAGGACGACAGCGTCACCGGCCCGCCGGTGCCCAGCGCGACCACCGCGCCGCCGGCTTCGCCATAGGCCTGCTGCCGCAACCGGTTCATCAGGGTCTGCGGCACCACGCGGCTGTCATCCAG
4Azorhizobium caulinodans ORS 571
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,511,900
1
GCAATTTTACAGATGGCACAAGAAGAATTAGAAATATGAATATAGTTAAGTATTTGTTTATGTTTTGAAGCACAAACAGGGAAAAAGAAACCAAAAATAAATTAAAATGGTTTCCTAGGCTAGGCGCGGTGGCTCACGCCTGTAATCCCA
120homo sapiens
G000009905
ASM990v1
GCF_000009905.1
PRJNA224116
SAMD00061067
null
2004/09/02
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/905/GCF_000009905.1_ASM990v1
637,000,306
RS_GCF_000009905.1
Monoisolate
Complete Genome
Full
representative genome
Major
292,459
2,734
Symbiobacterium thermophilum IAM 14863
strain=IAM14863
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Symbiobacteriaceae
Symbiobacterium
Symbiobacterium thermophilum
true
Eubacteria
Firmicutes
1
1
1
1
3,566,135
1
68.67
3,566,135
1
3,297
1,051,001
86.832243
98.02
0.03
0
347
yes
yes
yes
20
high
3,436,680
0
CGGGCGATGGAGAGCGCCCGCTTGTCCAGCTCCTCCCGCAACGTCCGGGGCAGGGTCGCCTGCAGCTGGAGAATGGAGACAAGCCCCAGCGCAATGGTGAGCGCCAGAAGCACGGAGATCAGCTTGGCCCGGATGCCGAAAACGCGCAGC
99Symbiobacterium thermophilum IAM 14863 IAM14863
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
2,137,590
0
TTTTTCATCTGATGAAAATTCTATACTTTTTAACTTGGCAATTAATTCTTGCTTTTCCCTGTCATTTTTATATCTCTTGGTATTAAGAGTATCTCGATAAACCTTCTTCATTTGTTGAAGTTCTTCGGGGGTTGGATAGGTAAACTCAAG
64Microcystis aeruginosa NIES-843
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,527,500
1
ATGATGGTAATGAAGATGACAGTGATGGTGATGATGATGGTAATGACATGGTGGTGTGATCATGATGATGGTGAGGATGGTGGTGGTGATGATGGTAACAGTGATGATGATGGTGATGGAGGTGATGGTGATGGTGGTGATGATGGTGAT
120homo sapiens
G000009345
ASM934v1
GCF_000009345.1
PRJNA57741
SAMEA1705958
null
2007/01/12
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/345/GCF_000009345.1_ASM934v1
640,069,335
RS_GCF_000009345.1
Monoisolate
Complete Genome
Full
reference genome
Major
393,305
630
Yersinia enterocolitica subsp. enterocolitica 8081
strain=8081
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia enterocolitica
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,683,620
2
47.22
4,615,899
1
4,253
1,352,606
85.086813
99.95
0
0
373
yes
yes
yes
20
high
4,420,000
0
AGTTGGCGCAGGATAAACAGTGCCGCCTGATAGTTTTTCGCCGCCAGCAGTTTATCCAACATCTCTTGTGGCAGTGGCTCATGGGTTTCGTAATGACCGGAAATAAACGCCAGTGCTTCCGGTTCCCAGCACCAATTTTCCATAAACTGG
115Yersinia enterocolitica subsp. enterocolitica 8081
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,664,550
1
CCAAGAATGATCCCCTCCCAAGGATTTCAAAACAACAAGCCAGGAAGGGTACTTTTCTGATGCCTTCTGTATGAAAGAAGAGTTCCAAGATAATGCCTGCTGTCCTCTGACTGCCTTTCTGATGAGCAACAAAATGTTTGATTTTCTTCT
120homo sapiens
G000007265
ASM726v1
GCF_000007265.1
PRJNA57943
SAMN02604013
null
2002/08/28
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/265/GCF_000007265.1_ASM726v1
637,000,285
RS_GCF_000007265.1
Monoisolate
Complete Genome
Full
reference genome
Major
208,435
1,311
Streptococcus agalactiae 2603V/R
strain=2603V/R
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus agalactiae
true
Eubacteria
Firmicutes
1
1
1
1
2,160,267
1
35.65
2,160,267
1
2,106
643,747
87.791509
100
0.18
0
298
yes
yes
yes
20
high
1,276,860
0
TTGTAGAATCAGATAAATCTGAATATAGTATTCTCATTTTACTACAAATAAAAAAACGATTAAACATATTAACACAAATGGATAGCAACTATCTTCATTCTCTAATGAATCAAAGTTCGGTAGAAATTAGGTTTGCTGCAGCCTGTATTC
91Streptococcus agalactiae 2603V/R
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,322,100
1
TCAAGCGATTCCCGTGCCTAAACCTCCCGAGTAGCTGGGATTACAGGCGCCCACCACCACGCCGGCTAATTTTAATATTTTTAGTAGATACGAGGTTTCGCTATGTTGGCCAGACTGGTCTCAAACTCCCAGCCTCATGTGATCCGCCCG
120homo sapiens
G000010645
ASM1064v1
GCF_000010645.1
PRJNA224116
SAMD00060940
null
2008/11/12
RIKEN Genomic Sciences Center (GSC)
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/645/GCF_000010645.1_ASM1064v1
643,348,524
RS_GCF_000010645.1
Monoisolate
Complete Genome
Full
representative genome
Major
511,995
511,435
Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2
null
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
null
Candidatus Azobacteroides
Candidatus Azobacteroides pseudotrichonymphae
true
Eubacteria
Bacteroidetes
1
0.968
1
1
1,224,919
5
32.95
1,114,206
1
1,089
310,957
74.780128
89.51
1.09
0
252
yes
yes
yes
20
medium
1,193,010
0
TAAATTCAACGCTGTCTTCAATCAAGGCATGAGTGCCAATCAGGATTTGTATGTCTCCACTTTTTACTTTTGGAAGCATCTCTTCTCTCACCTTGTTCTTTGTTGACCCAGTTAGCAATGCTACTTTTACAGTTGATCCTTCCAACAAAT
19Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,880,550
1
AAGAGGTATCATTCCCCCATTTGACAGATCTGGATCCTGAGGCAAGCACACCCAGTACCTGGCCCACGTCACAACAGGGTGGAGTTTGAGCCCGGGGAGTCTGAGTCCAGCCTCATGCCGCTGAGTGCCTTAGGAGCGCTGTGAGCCGGC
120homo sapiens
G000008185
ASM818v1
GCF_000008185.1
PRJNA57583
SAMN02603967
null
2004/02/03
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/185/GCF_000008185.1_ASM818v1
637,000,327
RS_GCF_000008185.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,275
158
Treponema denticola ATCC 35405
strain=ATCC 35405
null
Bacteria
Spirochaetes
Spirochaetia
Spirochaetales
Spirochaetaceae
Treponema
Treponema denticola
true
Eubacteria
Spirochaetes
1
1
1
1
2,843,201
1
37.87
2,843,201
1
2,578
885,778
91.799314
100
0
0
281
yes
yes
yes
20
high
872,690
0
CATCCTGCGTTACGGTATTGATATTCCGGATTGCAATTAAGACTTCTTTGCTGCCGTTTTCCTGTTCAGTCATTGCTTCCATAATGCTGTTGCTCATCTCTTTTACGTTTTCTGCAAGGGTGAAGATTGAGTTGAATTTTCCTTCAACGG
104Treponema denticola ATCC 35405
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,907,450
1
TATCCCCATGGTCCTTCAGAGCCCTGCCAGGGGCTGAGACCCACAGAAGCTTGGAGACCACGGGTATAGAAGATTCTGTTCGCGTGGCCCTCCCAGCTCTCTCTGCTCTGTGTCTCAGAGCACAGGCAGTCCCCGAGCTGCCGATCAAGG
120homo sapiens
G000010125
ASM1012v1
GCF_000010125.1
PRJNA224116
SAMD00061076
null
2005/08/12
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/125/GCF_000010125.1_ASM1012v1
637,000,284
RS_GCF_000010125.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,451
29,385
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
strain=ATCC 15305
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Staphylococcus
Staphylococcus saprophyticus
true
Eubacteria
Firmicutes
1
0.992
1
1
2,577,899
3
33.19
2,516,575
1
2,502
730,892
83.519176
99.44
0
0
348
yes
yes
yes
20
high
1,957,410
0
GACATTACCGTTTTGATCTGCTGGTTTGAATAATGTTAAAATTGCGCCAATAATCGCTAAAATTTGTGGAATCCCTGTCCAACAAAATACTAGGAAAAGAATACCCATACCTGTTTTTCTTGCGTAAAACTTGTGAATGCCAAAACTACC
90Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 ASM1012v1
G000007785
ASM778v1
GCF_000007785.1
PRJNA57669
SAMN02603978
null
2003/03/28
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/785/GCF_000007785.1_ASM778v1
637,000,101
RS_GCF_000007785.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,185
1,351
Enterococcus faecalis V583
strain=V583
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Enterococcaceae
Enterococcus
Enterococcus faecalis
true
Eubacteria
Firmicutes
0.99
0.991
1
1
3,359,974
4
37.38
3,218,031
1
3,271
1,000,353
87.714339
99.53
0.31
0
309
yes
yes
yes
20
high
10,400
0
CAGAACGTGGCAAAATTTTACCACGTCGTGTTACAGGTACTGGCGCTAAAAACCAACGTAAATTAACGATTGCTATTAAACGCGCACGTATCATGGGATTATTACCATTCGTTAGTGACGAACAATAATTTTATGACAATTTCCAGAACC
37Enterococcus faecalis V583 ASM778v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,338,900
1
TCAGAAGCCTCAGGTTGCAGCCACCAGCAAGACACAGCAACATCTTTCATAAACAGCCCTCCAGCCCCTGCTCTGGGGCCTCCACTTCCTTTGATTCAGACTCAACATCAGATGCAAGTCCTTTCTGTGCGGGAAGCACAACACCAAACC
120homo sapiens
G000009905
ASM990v1
GCF_000009905.1
PRJNA224116
SAMD00061067
null
2004/09/02
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/905/GCF_000009905.1_ASM990v1
637,000,306
RS_GCF_000009905.1
Monoisolate
Complete Genome
Full
representative genome
Major
292,459
2,734
Symbiobacterium thermophilum IAM 14863
strain=IAM14863
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Symbiobacteriaceae
Symbiobacterium
Symbiobacterium thermophilum
true
Eubacteria
Firmicutes
1
1
1
1
3,566,135
1
68.67
3,566,135
1
3,297
1,051,001
86.832243
98.02
0.03
0
347
yes
yes
yes
20
high
1,405,430
0
CCTGCAGAACACCCTGGAGCTCGCCCAGCTGGCCGACCGGCTGGGCTACGAGCGTTACTGGCTGGCGGAGCATCACAACACCGCCGCCATCGCCAGCGTGGCGCCGGAGATCATGATCGGCCAGGTGGCCCGGGTCACCCGTCGCATCCG
99Symbiobacterium thermophilum IAM 14863 IAM14863
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
95,100
1
GTGGGTACATGGAGGGGAACAACACACACCAGGGCCTCTCAGGGGGACAGGGGGTAGGAGACCATCAGGACAAACACGTGGGTACATGGAGGGGAACAACACACACCAGGGCCTCTCAGGGGGACAGGGGGTAGGAGACCATCAAGACAA
120homo sapiens
G000010145
ASM1014v1
GCF_000010145.1
PRJNA224116
SAMD00060917
null
2008/04/15
Kitasato Institute for Life Sciences
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/145/GCF_000010145.1_ASM1014v1
641,522,633
RS_GCF_000010145.1
Monoisolate
Complete Genome
Full
representative genome
Major
334,390
1,613
Lactobacillus fermentum IFO 3956
strain=IFO 3956
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Lactobacillaceae
Lactobacillus
Lactobacillus fermentum
true
Eubacteria
Firmicutes
1
1
1
1
2,098,685
1
51.47
2,098,685
1
2,094
609,422
85.544424
99.18
0.82
50
290
yes
yes
yes
20
high
507,780
0
CGATTCCTTGTTCCATGTTTGAACCGGTGGGGTTGGTTAAAACGGAATCGTACTTTTCCCGTAGCACCCGGACGGAGAGGGCGGTGGTCAAGGTTTTCCCGTTGGTCCCGGTGAGGATCACCAGGTCGTATTTCTTACTGAAGGCTTGTA
52Lactobacillus fermentum IFO 3956
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,063,200
1
CCAGGGCCCTTGCAGCTGCTGTCCAGGGTGAGGAAGTGTGGCGTGGGGTGCTGGAGAGGCTGCGGTGGCGCCGGCAGCAGGCTCTGGGCAGGGCCTGTGCCACTGTCCACCTTCCCCTCCAGTGATGGCCCAGGGAGCCAGGCGTTCTGG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,849,150
1
TCCTTGCTCTCAATGAGCTTAAAACAAAGCGTAAAGTTTGTGCGTCTTTTGTTAGATTTATTCCCAAAGAGTGGATGTTTTTGATGCTATACTAAATCATTTTTTTTCCTTGGCATACTAAAAATTTTGTTATTTATTCTATGGCTGCCA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,559,100
1
GTGGTAGTTAGGTTCATGGTGGTGGTTAGGGTCGTGGTGGTTAGGGTCATGGTGGTGGTTAGGTTCATGGTGGTGGTTAGGGTCACGGTGGTGGTTAGGGTCACGGTGGTAGTTAGAGTCACAGGGTAGAACCCTTGTGGTGGGATTTGT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,860,300
1
TGCAGGGAACCCGGGGGGAGCCCAAAGCCTCGGGAACTTCATTCCAACCCTGTCCTGGAAAACAGCTCCACATCAAGGGTTGCTTTGATGGGGAAGACTTTGGGGCTTGAATCCTTCTGAACACTCAGCAAAGCCAAGTCCACTGTCCAG
120homo sapiens
G000007845
ASM784v1
GCF_000007845.1
PRJNA57909
SAMN02603432
null
2003/04/30
J. Craig Venter Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/845/GCF_000007845.1_ASM784v1
637,000,014
RS_GCF_000007845.1
Monoisolate
Complete Genome
Full
reference genome
Major
198,094
1,392
Bacillus anthracis str. Ames
strain=Ames
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Eubacteria
Firmicutes
1
1
1
1
5,227,293
1
35.38
5,227,293
1
5,474
1,495,110
84.244541
99.23
0.15
0
381
yes
yes
yes
20
high
4,866,810
0
TCCTCTATTTTATAATACTGTATTTGATTTAATAAATGTTGCTGAATCGTTGTTGAATCCACACTGTAGATTTCCATCTGATTCTCGACTTGTTTGCTGGTACTTTTACTTGTGTTAGAGCTCTTTTTCTTCTCCCTCTCAAAACCACCT
5Bacillus anthracis str. Ames
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
590,550
1
CTCTGGGAGATGCGAGAAGCAAACACTTTGCCATGGGAGGGGCGCTTCCCGGACCGGGCGGGGGCCCTGCCCTCCCCACCCCCAGACCCCTGGTCCCCCAGGCCTTCCAAGCTCCCAAAGAAAACTTGAACCCCCACTCCAGGGGCTCCA
120homo sapiens
G000009145
ASM914v1
GCF_000009145.1
PRJNA224116
SAMEA3138193
null
2003/05/06
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/145/GCF_000009145.1_ASM914v1
637,000,195
RS_GCF_000009145.1
Multiisolate
Complete Genome
Full
representative genome
Major
228,410
915
Nitrosomonas europaea ATCC 19718
strain=ATCC 19718
null
Bacteria
Proteobacteria
Betaproteobacteria
Nitrosomonadales
Nitrosomonadaceae
Nitrosomonas
Nitrosomonas europaea
true
Eubacteria
Proteobacteria
0.98
1
0.9
1
2,812,094
1
50.72
2,812,094
1
2,670
848,291
88.875656
99.97
0.74
25
352
yes
yes
yes
20
high
2,325,960
0
TTTCGGCTATATGAAAGGGCAGGCAAGCACAGGCGGAGTCCACGGTCCGTATGATTATTTCATCACTGCATCGGCACAGCGCGAGGATGGCTATCGCGATCACAGCAACGGCCACATGGTACTGGGCAGCGCCAACTTCGGTTATCGATT
69Nitrosomonas europaea ATCC 19718
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,230,350
1
ATGTTAATATGAGTGCATAGACGGGTGTGTGGGTAGGCAGATGAATACATGAATGCGGGAATGAATGAATCTGGTGACACACACAGGAACCACCAGATGCCAGAAGGGTTCTGCAAAATGCATCACTCGCCACAAGGACACACATCAATC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,088,300
1
CCCTCTGGTTGCTTTTAAGATGTTCTCTTTATCTTTTTTTTTCAGGAACTTGACCAAGATGTGCCTTCTTAGGGGTGGTTCTCTTTCTATTTTTCCTCTTGGGATTTGTTGAGCTTCTTGGGAATTTTTCTGCTGTTATTTCTTCAAATA
120homo sapiens
G000011065
ASM1106v1
GCF_000011065.1
PRJNA62913
SAMN02604314
null
2003/03/28
Washington University Department of Molecular Biology and Pharmacology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/065/GCF_000011065.1_ASM1106v1
637,000,026
RS_GCF_000011065.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,186
818
Bacteroides thetaiotaomicron VPI-5482
strain=VPI-5482
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides thetaiotaomicron
true
Eubacteria
Bacteroidetes
1
0.998
0.7
1
6,293,399
2
42.86
6,260,361
1
4,944
1,919,297
89.876027
99.41
0.4
0
348
yes
yes
yes
20
high
1,899,950
0
TCATCATCCAATGCACCCGAATCGCCCGTCAGCGACTGGATATCACGCGCGAAAAGGAATCCGGCTTCGAGATTGTCCGCCAATACTACAACCTAGTAGACGAGCATTACCGGACCAAAAAGCAGGTACAGGACTATGCCGATATGCTTC
11Bacteroides thetaiotaomicron VPI-5482
G000008165
ASM816v1
GCF_000008165.1
PRJNA58091
SAMN02598266
null
2004/06/24
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/165/GCF_000008165.1_ASM816v1
637,000,015
RS_GCF_000008165.1
Monoisolate
Complete Genome
Full
reference genome
Major
260,799
1,392
Bacillus anthracis str. Sterne
strain=Sterne
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Eubacteria
Firmicutes
1
1
1
1
5,228,663
1
35.38
5,228,663
1
5,471
1,495,624
84.251844
99.23
0.15
0
381
yes
yes
yes
20
high
1,463,670
0
AAGGAGAAATAGTTGCCCATGCACCTTTGTTAGATTATGAATTAGAGAAACTAAATCCGAAGCTAATCGTCACGCTTGGCAATATAGGTCTTCAACGTTTAACAGGAAAAGATAAAAAAATCACAGATGTACACGGGCAATTATTAAAAC
6Bacillus anthracis str. Sterne ASM816v1
G000011005
ASM1100v1
GCA_000011005.1
PRJDA20361
SAMD00060931
null
2009/12/25
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/005/GCA_000011005.1_ASM1100v1
2,505,679,075
GB_GCA_000011005.1
Monoisolate
Complete Genome
Full
na
Major
304,371
570,267
Methanocella paludicola SANAE
strain=SANAE
null
Archaea
Euryarchaeota
Methanomicrobia
Methanocellales
Methanocellaceae
Methanocella
Methanocella paludicola
true
Archaea
Euryarchaeota
1
1
0.8
0.9
2,957,635
1
54.92
2,957,635
1
3,055
877,570
87.405714
100
0.65
0
198
no
yes
yes
17
medium
1,741,090
0
AGCTCATCCGGGACTTCATCGCCGCTAAATGGAAGTCCATGCAAAAAATATAAGCGGCCTTTTTATTTCTTTTCCTCGGATTCCTTACCCTCTTCGATGAGCTTCTTGACCTTCTGTCCGCCCTTGTGCCCGATCTCCTCGTAGAACTCC
58Methanocella paludicola SANAE