Datasets:

scShape-Benchmark
/

scShapeBench

	{
	"cycle_tree_edges": [],
	"cycle_lengths": {
	"0": 3
	},
	"pair_separations": {},
	"cycle_nodes": {
	"0": [
	0,
	1,
	2
	]
	},
	"cycle_motifs": {
	"0": {
	"cycle_id": 0,
	"original_cycle_length": 3,
	"original_motif_vertices": [
	0,
	1,
	2
	],
	"final_nodes": [
	0,
	1,
	2
	]
	}
	},
	"attachments": [],
	"edge_cycle_membership": {
	"(0, 1)": [
	0
	],
	"(1, 2)": [
	0
	],
	"(0, 2)": [
	0
	]
	},
	"num_cycles_ground_truth": 1,
	"betti_1": 1,
	"leaf_count": 0,
	"branch_nodes": [],
	"is_planar": true,
	"max_edge_cycle_multiplicity": 1,
	"embedding_params": {
	"feature_scale": 1.0,
	"packing_ratio": 6.0,
	"separation_ratio": 6.0,
	"target_packing_distance": 6.0,
	"hard_min_clearance_ratio": 0.2,
	"hard_min_clearance": 0.2,
	"target_min_separation": 0.2,
	"preferred_min_separation": 0.95,
	"preferred_min_separation_ratio": 0.95,
	"noise_ratio": 0.01,
	"sampling_density_per_feature": 22.0,
	"edge_length_jitter_ratio": 0.02,
	"branch_angle_spread": 0.8
	},
	"node_positions": {
	"0": [
	-0.1713883820052985,
	0.5415526769333093
	],
	"1": [
	-0.38800019025932947,
	-0.42079755025215726
	],
	"2": [
	0.559388572264628,
	-0.12075512668115246
	]
	},
	"node_positions_2d": {
	"0": [
	-0.1713883820052985,
	0.5415526769333093
	],
	"1": [
	-0.38800019025932947,
	-0.42079755025215726
	],
	"2": [
	0.559388572264628,
	-0.12075512668115246
	]
	},
	"embedding_valid": true,
	"embedding_dimension": 2,
	"embedding_dimensions_attempted": [
	2
	],
	"embedding_attempt_history": [
	{
	"dimension": 2,
	"embedding_valid": true,
	"global_embedding_attempts": 1,
	"local_placement_rejections": 0,
	"min_nonadjacent_node_distance": Infinity,
	"min_nonincident_edge_distance": Infinity,
	"min_nonincident_node_edge_distance": Infinity,
	"failure_reason": null,
	"refinement_applied": true,
	"refinement_iterations": 19,
	"refinement_objective_delta": -0.0005020194980589084,
	"refinement_clearance_delta": NaN
	}
	],
	"embedding_constructive_success": true,
	"embedding_rejected": false,
	"min_nonadjacent_node_distance": Infinity,
	"min_nonincident_edge_distance": Infinity,
	"min_nonincident_node_edge_distance": Infinity,
	"global_embedding_attempts": 1,
	"total_global_embedding_attempts": 1,
	"local_placement_rejections": 0,
	"embedding_fallback_used": false,
	"embedding_fallback_mode": null,
	"embedding_refinement": {
	"enabled": true,
	"applied": true,
	"iterations": 19,
	"objective_before": 0.0010557891275660312,
	"objective_after": 0.0005537696295071228,
	"objective_delta": -0.0005020194980589084,
	"clearance_before": Infinity,
	"clearance_after": Infinity,
	"clearance_delta": NaN,
	"accepted_steps": 8,
	"reason": "accepted"
	},
	"point_cloud_params": {
	"feature_scale": 1.0,
	"sampling_density_per_feature": 22.0,
	"noise_ratio": 0.01,
	"sigma": 0.01,
	"embedding_dimension": 2,
	"include_node_points": true,
	"include_junction_points": true,
	"node_tube_sampling_policy": "edge_tubes_only_except_isolated_nodes",
	"min_points_per_edge": 2,
	"density_jitter_ratio_range": [
	0.0,
	0.15
	],
	"endpoint_sampling_mode": "include",
	"feature_thickness_ratio": 0.12,
	"feature_thickness_radius": 0.12,
	"tube_sampling_mode": "solid"
	},
	"clean_points": [
	[
	-0.11003598735965642,
	0.5277430962115642
	],
	[
	-0.10485505568089612,
	0.47842900790424175
	],
	[
	-0.12905397463246493,
	0.43572792013611117
	],
	[
	-0.2039180391178039,
	0.40443086021511965
	],
	[
	-0.1658356041179295,
	0.3477110957544221
	],
	[
	-0.13672688233349217,
	0.2930111907912734
	],
	[
	-0.22137718927136674,
	0.26391687953056514
	],
	[
	-0.2732808847351827,
	0.22745175614220411
	],
	[
	-0.2938647857948096,
	0.18393697753645155
	],
	[
	-0.37949347659227295,
	0.15506288703426263
	],
	[
	-0.2312201615230402,
	0.07354067008728671
	],
	[
	-0.3238356901796334,
	0.046239220750331475
	],
	[
	-0.30616622373359315,
	-0.005885865073243989
	],
	[
	-0.23570683878242088,
	-0.0698932359339651
	],
	[
	-0.3814010489253731,
	-0.0852474036558621
	],
	[
	-0.3306900428392356,
	-0.144809685883361
	],
	[
	-0.34937032146763,
	-0.18875294373233895
	],
	[
	-0.3473072283645806,
	-0.23736524943219628
	],
	[
	-0.31696941401203543,
	-0.2923418062380613
	],
	[
	-0.4226169995635075,
	-0.3167099186987681
	],
	[
	-0.4291167370757442,
	-0.36339484892662627
	],
	[
	-0.4817836338413971,
	-0.3996881861924484
	],
	[
	-0.16811858366420684,
	0.5451605058909925
	],
	[
	-0.08329216148815727,
	0.5749026790994948
	],
	[
	-0.1443519253264034,
	0.44367700306362634
	],
	[
	-0.12351172022178109,
	0.40281808630832755
	],
	[
	-0.04182292705644942,
	0.4290982635089795
	],
	[
	0.041030272235366774,
	0.45666322273696336
	],
	[
	-0.016935749247568632,
	0.328851119066348
	],
	[
	0.07361473945667611,
	0.36490911081222
	],
	[
	0.15010900824717835,
	0.38545775551272266
	],
	[
	0.1526976130502643,
	0.32446039435722346
	],
	[
	0.07628029570378338,
	0.17628950626657108
	],
	[
	0.1759093651554397,
	0.22236461928367146
	],
	[
	0.1871909108618767,
	0.17095887224223036
	],
	[
	0.17748275550420722,
	0.09639351613238571
	],
	[
	0.3158969654913599,
	0.1852633640397911
	],
	[
	0.3297323633487903,
	0.13667548549751854
	],
	[
	0.3905292005662551,
	0.13990390360216717
	],
	[
	0.3228187593278739,
	0.0013400054469475606
	],
	[
	0.3338426989606771,
	-0.05034997889452854
	],
	[
	0.46289771562048065,
	0.028193125530680124
	],
	[
	0.5358499049820811,
	0.04483351186142073
	],
	[
	0.5474483266587689,
	-0.006222600682046074
	],
	[
	0.5935666670107255,
	-0.01919013734963057
	],
	[
	0.5069093563566383,
	-0.17865962569871058
	],
	[
	-0.3793557967976612,
	-0.44809236118905804
	],
	[
	-0.386090903908669,
	-0.2951686473447482
	],
	[
	-0.32022053086596347,
	-0.371497901052896
	],
	[
	-0.24345278437754087,
	-0.48223578611598994
	],
	[
	-0.26257521899026465,
	-0.290198887098876
	],
	[
	-0.2058908396419384,
	-0.33752321845273076
	],
	[
	-0.1350039825296508,
	-0.42969210103181976
	],
	[
	-0.12006482526579032,
	-0.34520522441984286
	],
	[
	-0.08791482939560921,
	-0.3150618466210697
	],
	[
	-0.06297224908950876,
	-0.26216093863378886
	],
	[
	-0.02590800901191593,
	-0.2475343657021066
	],
	[
	0.03672364532470035,
	-0.31363731317459975
	],
	[
	0.06336241958266373,
	-0.2660921647826805
	],
	[
	0.1165274895948116,
	-0.30230422048811484
	],
	[
	0.14138365016491683,
	-0.24913044079899965
	],
	[
	0.16153609099603047,
	-0.18110459062683149
	],
	[
	0.22186586818893944,
	-0.23993932411576765
	],
	[
	0.2535337562749738,
	-0.2082736832596911
	],
	[
	0.32667038567093215,
	-0.3075462578914582
	],
	[
	0.3160862563802828,
	-0.14246919480973658
	],
	[
	0.3626727842512178,
	-0.15790939824108585
	],
	[
	0.40800027295646935,
	-0.1693741653226365
	],
	[
	0.4647491412199466,
	-0.2169021214599274
	],
	[
	0.5040958970705773,
	-0.20948262867352374
	],
	[
	0.525476666017251,
	-0.14533524421804908
	],
	[
	0.5435957973100352,
	-0.07088918658181735
	],
	[
	-0.1713883820052985,
	0.5415526769333093
	],
	[
	-0.38800019025932947,
	-0.42079755025215726
	],
	[
	0.559388572264628,
	-0.12075512668115246
	]
	],
	"noisy_points": [
	[
	-0.10063994326011812,
	0.5224969314271407
	],
	[
	-0.10057790423092124,
	0.48915515091711326
	],
	[
	-0.1383381029599201,
	0.42830167120627266
	],
	[
	-0.19161214149973926,
	0.3972717584008516
	],
	[
	-0.17400497270364976,
	0.35449638475599365
	],
	[
	-0.14671369327121836,
	0.2875427153396841
	],
	[
	-0.22592345466879185,
	0.26733042131524604
	],
	[
	-0.27728338917874024,
	0.225313507776558
	],
	[
	-0.31453279112518817,
	0.18145821211861718
	],
	[
	-0.3708208685397499,
	0.15471258417890033
	],
	[
	-0.23780714547357062,
	0.07384193174902
	],
	[
	-0.31680019947819055,
	0.041507828798064354
	],
	[
	-0.3129198204493595,
	-0.03087380407458731
	],
	[
	-0.2388254104895054,
	-0.06153283963302443
	],
	[
	-0.393416705468672,
	-0.09215572526040869
	],
	[
	-0.3243818294315443,
	-0.15184832872200052
	],
	[
	-0.35007283349823604,
	-0.20800057025079466
	],
	[
	-0.350978454243601,
	-0.23852176983680193
	],
	[
	-0.3167417128350532,
	-0.30380644274651264
	],
	[
	-0.4248685078179097,
	-0.315636676888042
	],
	[
	-0.41411432704636053,
	-0.3522355801112945
	],
	[
	-0.47008451323325123,
	-0.38971477027674356
	],
	[
	-0.15668055118638077,
	0.5330500838820007
	],
	[
	-0.0922662747679905,
	0.5735182419372538
	],
	[
	-0.15591099217791232,
	0.4429912601127093
	],
	[
	-0.12163934531060927,
	0.41461428826408064
	],
	[
	-0.05779962135515333,
	0.43486342475112116
	],
	[
	0.03556617636159433,
	0.4485677032727313
	],
	[
	-0.02551031959926891,
	0.3168073710624715
	],
	[
	0.06417940746095607,
	0.34654961081888486
	],
	[
	0.13008540109286448,
	0.379493750435345
	],
	[
	0.1441190396795396,
	0.3161924565508861
	],
	[
	0.09738964344912628,
	0.1711380090159269
	],
	[
	0.18038992307078222,
	0.213824359214595
	],
	[
	0.17894649564640938,
	0.19175085343723963
	],
	[
	0.16333678126732112,
	0.09125067248873833
	],
	[
	0.3072989616678892,
	0.16971128294074347
	],
	[
	0.34469656976239665,
	0.16117814084772145
	],
	[
	0.39573955672317734,
	0.1339542941332487
	],
	[
	0.3237065031951631,
	0.002213630556191777
	],
	[
	0.3418040381344984,
	-0.06242640296920424
	],
	[
	0.4567060190309004,
	0.0283925106535598
	],
	[
	0.5404342054125544,
	0.0383390652014782
	],
	[
	0.5519199307466923,
	-0.013688966442062488
	],
	[
	0.5980032349677358,
	-0.006583305995305207
	],
	[
	0.5032333129790683,
	-0.1792775165865665
	],
	[
	-0.3858514149080495,
	-0.4559370790605179
	],
	[
	-0.3809442944861381,
	-0.2835699215357771
	],
	[
	-0.32222407832245636,
	-0.35925041324291956
	],
	[
	-0.23921002964478222,
	-0.48506219403586587
	],
	[
	-0.2623743930843384,
	-0.308703156845252
	],
	[
	-0.20562440755282752,
	-0.3310805497159687
	],
	[
	-0.1355901592391882,
	-0.4370095329911312
	],
	[
	-0.12010103959802947,
	-0.34474467766472294
	],
	[
	-0.09205410923974834,
	-0.3299353405160943
	],
	[
	-0.06832492280277946,
	-0.2826424336391692
	],
	[
	-0.0360418152838654,
	-0.24733773429791497
	],
	[
	0.04386304784280378,
	-0.30252145103221306
	],
	[
	0.07018971034553312,
	-0.2687031623986104
	],
	[
	0.12950365959717572,
	-0.2994274347466046
	],
	[
	0.14525396828782364,
	-0.24756431610913576
	],
	[
	0.15551498349990808,
	-0.18039897050687026
	],
	[
	0.21363531214526785,
	-0.23864172975003148
	],
	[
	0.23116736458941325,
	-0.21477531368582287
	],
	[
	0.32804814299536944,
	-0.29661817069279756
	],
	[
	0.3071045324967045,
	-0.1375700075115835
	],
	[
	0.364733167398817,
	-0.1511625232330982
	],
	[
	0.4329267570152982,
	-0.1718643846360111
	],
	[
	0.46495605012694985,
	-0.22008121359163596
	],
	[
	0.5157530711226211,
	-0.21689775521420698
	],
	[
	0.5167414907967749,
	-0.14284741649730562
	],
	[
	0.5428909496602361,
	-0.07390276004819148
	],
	[
	-0.16525495443518506,
	0.552810638105471
	],
	[
	-0.3941666932694512,
	-0.4280678063496578
	],
	[
	0.5648760000151488,
	-0.11485144999778742
	]
	],
	"point_centerline_points": [
	[
	-0.1713883820052985,
	0.5415526769333093
	],
	[
	-0.1817032300173952,
	0.49572647563876326
	],
	[
	-0.19201807802949192,
	0.44990027434421725
	],
	[
	-0.20233292604158862,
	0.4040740730496713
	],
	[
	-0.21264777405368535,
	0.35824787175512524
	],
	[
	-0.22296262206578205,
	0.31242167046057917
	],
	[
	-0.23327747007787875,
	0.26659546916603316
	],
	[
	-0.2435923180899755,
	0.2207692678714872
	],
	[
	-0.2539071661020722,
	0.17494306657694111
	],
	[
	-0.2642220141141689,
	0.12911686528239508
	],
	[
	-0.2745368621262656,
	0.0832906639878491
	],
	[
	-0.2848517101383623,
	0.037464462693303086
	],
	[
	-0.295166558150459,
	-0.00836173860124298
	],
	[
	-0.30548140616255576,
	-0.054187939895789045
	],
	[
	-0.31579625417465246,
	-0.100014141190335
	],
	[
	-0.32611110218674916,
	-0.14584034248488098
	],
	[
	-0.3364259501988459,
	-0.19166654377942707
	],
	[
	-0.3467407982109426,
	-0.23749274507397317
	],
	[
	-0.3570556462230393,
	-0.2833189463685191
	],
	[
	-0.367370494235136,
	-0.3291451476630651
	],
	[
	-0.3776853422472327,
	-0.3749713489576112
	],
	[
	-0.38800019025932947,
	-0.42079755025215726
	],
	[
	-0.1713883820052985,
	0.5415526769333093
	],
	[
	-0.1396154709500843,
	0.512756685471811
	],
	[
	-0.1078425598948701,
	0.4839606940103127
	],
	[
	-0.0760696488396559,
	0.4551647025488143
	],
	[
	-0.04429673778444171,
	0.426368711087316
	],
	[
	-0.012523826729227513,
	0.39757271962581764
	],
	[
	0.01924908432598668,
	0.3687767281643193
	],
	[
	0.05102199538120089,
	0.3399807367028209
	],
	[
	0.08279490643641506,
	0.3111847452413226
	],
	[
	0.11456781749162924,
	0.2823887537798243
	],
	[
	0.14634072854684343,
	0.253592762318326
	],
	[
	0.17811363960205767,
	0.22479677085682762
	],
	[
	0.20988655065727185,
	0.19600077939532926
	],
	[
	0.24165946171248603,
	0.16720478793383095
	],
	[
	0.27343237276770027,
	0.13840879647233256
	],
	[
	0.30520528382291445,
	0.10961280501083423
	],
	[
	0.33697819487812863,
	0.08081681354933593
	],
	[
	0.3687511059333428,
	0.05202082208783762
	],
	[
	0.40052401698855694,
	0.023224830626339288
	],
	[
	0.43229692804377123,
	-0.005571160835159114
	],
	[
	0.46406983909898536,
	-0.03436715229665742
	],
	[
	0.4958427501541996,
	-0.06316314375815574
	],
	[
	0.5276156612094138,
	-0.09195913521965414
	],
	[
	0.559388572264628,
	-0.12075512668115246
	],
	[
	-0.38800019025932947,
	-0.42079755025215726
	],
	[
	-0.35010463975837114,
	-0.408795853309317
	],
	[
	-0.31220908925741286,
	-0.3967941563664769
	],
	[
	-0.2743135387564546,
	-0.38479245942363666
	],
	[
	-0.23641798825549626,
	-0.3727907624807965
	],
	[
	-0.19852243775453798,
	-0.3607890655379563
	],
	[
	-0.16062688725357968,
	-0.3487873685951161
	],
	[
	-0.12273133675262132,
	-0.3367856716522759
	],
	[
	-0.08483578625166302,
	-0.32478397470943565
	],
	[
	-0.0469402357507048,
	-0.31278227776659556
	],
	[
	-0.00904468524974647,
	-0.30078058082375536
	],
	[
	0.028850865251211805,
	-0.28877888388091516
	],
	[
	0.06674641575217008,
	-0.27677718693807496
	],
	[
	0.10464196625312847,
	-0.26477548999523476
	],
	[
	0.1425375167540868,
	-0.25277379305239456
	],
	[
	0.18043306725504502,
	-0.24077209610955438
	],
	[
	0.21832861775600335,
	-0.22877039916671418
	],
	[
	0.25622416825696165,
	-0.21676870222387398
	],
	[
	0.29411971875791987,
	-0.2047670052810338
	],
	[
	0.3320152692588782,
	-0.1927653083381936
	],
	[
	0.36991081975983653,
	-0.1807636113953534
	],
	[
	0.40780637026079475,
	-0.16876191445251323
	],
	[
	0.44570192076175313,
	-0.15676021750967303
	],
	[
	0.4835974712627114,
	-0.14475852056683283
	],
	[
	0.5214930217636696,
	-0.13275682362399266
	],
	[
	0.559388572264628,
	-0.12075512668115246
	],
	[
	-0.1713883820052985,
	0.5415526769333093
	],
	[
	-0.38800019025932947,
	-0.42079755025215726
	],
	[
	0.559388572264628,
	-0.12075512668115246
	]
	],
	"point_tube_offsets": [
	[
	0.06135239464564208,
	-0.013809580721745117
	],
	[
	0.07684817433649907,
	-0.01729746773452153
	],
	[
	0.062964103397027,
	-0.014172354208106077
	],
	[
	-0.001585113076215271,
	0.00035678716544837187
	],
	[
	0.04681216993575584,
	-0.010536776000703154
	],
	[
	0.08623573973228989,
	-0.01941047966930577
	],
	[
	0.011900280806511997,
	-0.002678589635468036
	],
	[
	-0.029688566645207203,
	0.006682488270716915
	],
	[
	-0.03995761969273743,
	0.008993910959510439
	],
	[
	-0.11527146247810403,
	0.02594602175186754
	],
	[
	0.0433167006032254,
	-0.009749993900562384
	],
	[
	-0.03898398004127108,
	0.008774758057028393
	],
	[
	-0.010999665583134125,
	0.002475873527998991
	],
	[
	0.06977456738013489,
	-0.015705296038176057
	],
	[
	-0.06560479475072062,
	0.014766737534472895
	],
	[
	-0.0045789406524864166,
	0.0010306566015200018
	],
	[
	-0.012944371268784075,
	0.002913600047088124
	],
	[
	-0.0005664301536379964,
	0.00012749564177687748
	],
	[
	0.04008623221100386,
	-0.009022859869542156
	],
	[
	-0.05524650532837148,
	0.012435228964296984
	],
	[
	-0.05143139482851149,
	0.011576500030984906
	],
	[
	-0.09378344358206762,
	0.02110936405970887
	],
	[
	0.003269798341091652,
	0.0036078289576832036
	],
	[
	0.05632330946192704,
	0.06214599362768377
	],
	[
	-0.0365093654315333,
	-0.04028369094668639
	],
	[
	-0.04744207138212519,
	-0.05234661624048674
	],
	[
	0.0024738107279922935,
	0.002729552421663485
	],
	[
	0.05355409896459429,
	0.05909050311114572
	],
	[
	-0.036184833573555314,
	-0.039925609097971285
	],
	[
	0.02259274407547522,
	0.024928374109399062
	],
	[
	0.06731410181076329,
	0.07427301027140007
	],
	[
	0.03812979555863508,
	0.04207164057739917
	],
	[
	-0.07006043284306006,
	-0.07730325605175492
	],
	[
	-0.002204274446617973,
	-0.0024321515731561536
	],
	[
	-0.022695639795395163,
	-0.025041907153098907
	],
	[
	-0.0641767062082788,
	-0.07081127180144524
	],
	[
	0.04246459272365963,
	0.046854567567458545
	],
	[
	0.024527079525875857,
	0.0270626804866843
	],
	[
	0.05355100568812647,
	0.05908709005283124
	],
	[
	-0.0459323466054689,
	-0.05068081664089006
	],
	[
	-0.06668131802787983,
	-0.07357480952086783
	],
	[
	0.030600787576709403,
	0.03376428636583924
	],
	[
	0.07178006588309574,
	0.07920066415807815
	],
	[
	0.05160557650456931,
	0.05694054307610966
	],
	[
	0.06595100580131162,
	0.07276899787002357
	],
	[
	-0.05247921590798981,
	-0.057904499017558106
	],
	[
	0.00864439346166826,
	-0.0272948109369008
	],
	[
	-0.03598626415029786,
	0.11362720596456881
	],
	[
	-0.008011441608550635,
	0.025296255313580936
	],
	[
	0.03086075437891371,
	-0.09744332669235331
	],
	[
	-0.026157230734768375,
	0.08259187538192053
	],
	[
	-0.007368401887400417,
	0.023265847085225562
	],
	[
	0.025622904723928877,
	-0.08090473243670365
	],
	[
	0.002666511486831004,
	-0.008419552767566934
	],
	[
	-0.003079043143946194,
	0.009722128088365955
	],
	[
	-0.01603201333880395,
	0.05062133913280668
	],
	[
	-0.01686332376216946,
	0.05324621512164875
	],
	[
	0.007872780073488546,
	-0.024858429293684595
	],
	[
	-0.003383996169506355,
	0.010685022155394472
	],
	[
	0.011885523341683137,
	-0.03752873049288006
	],
	[
	-0.0011538665891699799,
	0.003643352253394899
	],
	[
	-0.018896976259014542,
	0.059667505482722906
	],
	[
	0.003537250432936098,
	-0.011168924949053468
	],
	[
	-0.0026904119819878337,
	0.008495018964182893
	],
	[
	0.03255066691301228,
	-0.10277925261042435
	],
	[
	-0.015929012878595366,
	0.05029611352845703
	],
	[
	-0.007238035508618747,
	0.02285421315426757
	],
	[
	0.00019390269567462427,
	-0.0006122508701232681
	],
	[
	0.019047220458193456,
	-0.06014190395025437
	],
	[
	0.02049842580786592,
	-0.0647241081066909
	],
	[
	0.00398364425358137,
	-0.01257842059405643
	],
	[
	-0.01579277495459283,
	0.04986594009933511
	],
	[
	0.0,
	0.0
	],
	[
	0.0,
	0.0
	],
	[
	0.0,
	0.0
	]
	],
	"point_source_type": [
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"edge",
	"node",
	"node",
	"node"
	],
	"point_source_edge": [
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	1
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	0,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	[
	1,
	2
	],
	null,
	null,
	null
	],
	"point_source_node": [
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	0,
	1,
	2
	],
	"point_source_t": [
	0.0,
	0.047619047619047616,
	0.09523809523809523,
	0.14285714285714285,
	0.19047619047619047,
	0.23809523809523808,
	0.2857142857142857,
	0.3333333333333333,
	0.38095238095238093,
	0.42857142857142855,
	0.47619047619047616,
	0.5238095238095237,
	0.5714285714285714,
	0.6190476190476191,
	0.6666666666666666,
	0.7142857142857142,
	0.7619047619047619,
	0.8095238095238095,
	0.8571428571428571,
	0.9047619047619047,
	0.9523809523809523,
	1.0,
	0.0,
	0.043478260869565216,
	0.08695652173913043,
	0.13043478260869565,
	0.17391304347826086,
	0.21739130434782608,
	0.2608695652173913,
	0.30434782608695654,
	0.34782608695652173,
	0.3913043478260869,
	0.43478260869565216,
	0.4782608695652174,
	0.5217391304347826,
	0.5652173913043478,
	0.6086956521739131,
	0.6521739130434783,
	0.6956521739130435,
	0.7391304347826086,
	0.7826086956521738,
	0.8260869565217391,
	0.8695652173913043,
	0.9130434782608695,
	0.9565217391304348,
	1.0,
	0.0,
	0.04,
	0.08,
	0.12,
	0.16,
	0.2,
	0.24,
	0.28,
	0.32,
	0.36,
	0.4,
	0.44,
	0.48,
	0.52,
	0.56,
	0.6,
	0.64,
	0.68,
	0.72,
	0.76,
	0.8,
	0.84,
	0.88,
	0.92,
	0.96,
	1.0,
	null,
	null,
	null
	],
	"point_noise_vectors": [
	[
	0.0093960440995383,
	-0.005246164784423527
	],
	[
	0.004277151449974886,
	0.010726143012871493
	],
	[
	-0.009284128327455182,
	-0.0074262489298385125
	],
	[
	0.012305897618064648,
	-0.007159101814268022
	],
	[
	-0.008169368585720269,
	0.006785289001571564
	],
	[
	-0.009986810937726192,
	-0.005468475451589273
	],
	[
	-0.004546265397425118,
	0.0034135417846809114
	],
	[
	-0.004002504443557546,
	-0.002138248365646117
	],
	[
	-0.020668005330378526,
	-0.0024787654178343595
	],
	[
	0.00867260805252309,
	-0.00035030285536229595
	],
	[
	-0.006586983950530415,
	0.0003012616617332858
	],
	[
	0.007035490701442824,
	-0.00473139195226712
	],
	[
	-0.006753596715766362,
	-0.024987939001343322
	],
	[
	-0.003118571707084521,
	0.008360396300940666
	],
	[
	-0.012015656543298961,
	-0.006908321604546595
	],
	[
	0.006308213407691267,
	-0.007038642838639524
	],
	[
	-0.0007025120306060772,
	-0.019247626518455713
	],
	[
	-0.003671225879020419,
	-0.00115652040460566
	],
	[
	0.0002277011769822414,
	-0.011464636508451346
	],
	[
	-0.00225150825440218,
	0.0010732418107260973
	],
	[
	0.015002410029383665,
	0.011159268815331755
	],
	[
	0.01169912060814586,
	0.009973415915704815
	],
	[
	0.011438032477826064,
	-0.012110422008991838
	],
	[
	-0.008974113279833235,
	-0.0013844371622410154
	],
	[
	-0.011559066851508926,
	-0.0006857429509170809
	],
	[
	0.0018723749111718094,
	0.011796201955753084
	],
	[
	-0.015976694298703912,
	0.005765161242141632
	],
	[
	-0.005464095873772449,
	-0.008095519464232055
	],
	[
	-0.008574570351700277,
	-0.012043748003876507
	],
	[
	-0.009435331995720043,
	-0.01835949999333513
	],
	[
	-0.02002360715431387,
	-0.005964005077377627
	],
	[
	-0.0085785733707247,
	-0.008267937806337325
	],
	[
	0.021109347745342903,
	-0.005151497250644177
	],
	[
	0.004480557915342514,
	-0.00854026006907646
	],
	[
	-0.008244415215467326,
	0.020791981195009288
	],
	[
	-0.014145974236886108,
	-0.005142843643647381
	],
	[
	-0.008598003823470679,
	-0.015552081099047637
	],
	[
	0.014964206413606363,
	0.024502655350202917
	],
	[
	0.005210356156922217,
	-0.00594960946891847
	],
	[
	0.0008877438672891872,
	0.0008736251092442163
	],
	[
	0.007961339173821295,
	-0.012076424074675698
	],
	[
	-0.006191696589580245,
	0.00019938512287967673
	],
	[
	0.0045843004304733,
	-0.00649444665994253
	],
	[
	0.004471604087923424,
	-0.0074663657600164135
	],
	[
	0.0044365679570102625,
	0.012606831354325363
	],
	[
	-0.003676043377570035,
	-0.0006178908878559112
	],
	[
	-0.006495618110388302,
	-0.00784471787145984
	],
	[
	0.0051466094225309025,
	0.011598725808971094
	],
	[
	-0.0020035474564928956,
	0.012247487809976412
	],
	[
	0.0042427547327586355,
	-0.0028264079198759505
	],
	[
	0.00020082590592622842,
	-0.018504269746376013
	],
	[
	0.0002664320891108865,
	0.006442668736762069
	],
	[
	-0.0005861767095374348,
	-0.007317431959311476
	],
	[
	-3.621433223914218e-05,
	0.0004605467551199394
	],
	[
	-0.004139279844139134,
	-0.014873493895024611
	],
	[
	-0.00535267371327071,
	-0.02048149500538031
	],
	[
	-0.01013380627194947,
	0.0001966314041916399
	],
	[
	0.007139402518103429,
	0.011115862142386714
	],
	[
	0.006827290762869399,
	-0.002610997615929928
	],
	[
	0.012976170002364127,
	0.002876785741510247
	],
	[
	0.0038703181229067986,
	0.0015661246898638949
	],
	[
	-0.0060211074961224,
	0.0007056201199612345
	],
	[
	-0.008230556043671605,
	0.0012975943657361853
	],
	[
	-0.022366391685560563,
	-0.006501630426131791
	],
	[
	0.0013777573244372937,
	0.010928087198660593
	],
	[
	-0.008981723883578336,
	0.004899187298153092
	],
	[
	0.002060383147599219,
	0.006746875007987651
	],
	[
	0.02492648405882885,
	-0.0024902193133746124
	],
	[
	0.00020690890700326574,
	-0.0031790921317085582
	],
	[
	0.011657174052043832,
	-0.007415126540683251
	],
	[
	-0.00873517522047602,
	0.002487827720743453
	],
	[
	-0.0007048476497990454,
	-0.0030135734663741197
	],
	[
	0.006133427570113436,
	0.011257961172161726
	],
	[
	-0.006166503010121699,
	-0.007270256097500552
	],
	[
	0.005487427750520853,
	0.005903676683365038
	]
	],
	"num_clean_points": 75,
	"num_edge_sampled_points": 72,
	"num_node_sampled_points": 3,
	"point_branch_depth": [
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null
	],
	"point_branch_root": [
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null,
	null
	],
	"point_cycle_id": [
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0,
	0
	],
	"sample_id": 43,
	"difficulty": "full",
	"difficulty_coordinate": {
	"noise_ratio": 0.01,
	"crowding_r": 0.0,
	"sampling_density_per_feature": 22.0,
	"feature_thickness_ratio": 0.12,
	"num_components": 1,
	"requested_embedding_dimension": 2
	},
	"realized_geometry": {
	"realized_separation_to_feature_scale": Infinity,
	"realized_absolute_hardness": Infinity,
	"crowding_gamma": 1.0,
	"crowding_gamma_min": 0.0,
	"feature_thickness_radius": 0.12,
	"feature_thickness_budget": 0.12,
	"effective_max_tube_radius_for_sampling": 0.12,
	"max_admissible_tube_radius_before_crowding": 0.12,
	"cycle_hole_radius_cap": 0.12,
	"cycle_hole_radius_fraction": 0.2,
	"requested_noise_ratio": 0.01,
	"realized_noise_ratio": 0.01,
	"max_admissible_noise_ratio_after_crowding": 0.01,
	"requested_crowding_r": 0.0,
	"realized_crowding_r": 0.0,
	"thickness_aware_min_required_clearance": 0.12,
	"thickness_clearance_noise_margin": 0.12,
	"minimum_realized_component_gap": Infinity
	},
	"graph_summary": {
	"num_nodes": 3,
	"num_edges": 3,
	"num_components": 1,
	"num_clean_points": 75,
	"topology_classes": [
	"single_cycle"
	]
	}
	}