Categorical list of databases on the Molecular Biology Database List

## Anatomy

* Atlas of Primate Brain
* Human Anatomy Database
* GGED/DMDA
* Zebrafish Developmental Anatomy

## DNA and cDNA sequences

* AMmtDB
* Berkeley Fly Database
* DDBJ
* EMBL Nucleotide Sequence Database
* GenBank
* GSDB
* PEDB
* UniGene
* Vertebrate MitBASE

## DNA sequence motifs

* Ares Lab Intron Site
* EPD
* ooTFD
* PLACE
* PlantCARE
* TRANSFAC/COMPEL
* TRRD

## Gene expression

* ARRAYdb
* ASDB
* Flyview
* GXD/MGD
* Kidney and Ducted-Gland Gene Expression Databases
* The Mouse Atlas and Gene Expression Database Project
* Nematode Expression Pattern DataBase
* Tooth Database

## Genome overview

* ACeDB
* AtDB
* CyanoBase
* ECD/ECDC
* EMGLib
* FlyBase
* GOBASE
* HIV Sequence Database
* MitBASE
* MITOMAP
* RsGDB
* SGD
* TIGR Microbial Database

## Maps

* DRESH
* G3-RH
* GB4-RH
* GDB
* GenAtlas
* GeneMap'98
* HuGeMap
* IXDB
* Radiation Hybrid Database
* Virgil

## Mutations

* 16SMD
* 23SMD
* The Ad5E1A Database
* The Androgen Receptor Gene Mutations Database
* APC Gene Database
* Asthma and Allergy Gene Database
* Atlas of Genetics and Cytogenetics in Oncology and Haematology
* BTKbase
* Database of Germline p53 Mutations
* GRAP
* Haemophilia B Database
* HAMSTeR
* HGBASE
* HGMD
* HIV RT and Protease Sequence Database
* Human MitBASE
* Human PAX2 Sequence Variant Database
* The Human PAX6 Mutation Database
* The Human Type I and Type III Collagen Mutation Database
* HvrBase
* IARC Database of p53 Gene Mutations
* KinMutBase
* KMeyeDB
* LDLR Database
* Marfan Database
* MmtDB
* A Mutation Spectra Database
* NCL Mutation Database
* OMIM
* p53 Databases
* p53 Gene Mutation
* PAHdb
* PMD
* RB1base
* The SV40 T Antigen Database
* VHL Database
* WT1 Database
* ZFIN

## Other

* AAindex
* CarbBank
* CUTG
* DrugDB
* The Homeobox Page
* INFOGENE
* The Mendel Database
* MPDB
* MTB
* NCBI/GenBank Taxonomy Database
* PubMed
* Tree of Life
* Vector DB
* Xenopus Molecular Marker Resource

## Pathways and regulation

* EcoCyc
* EpoDB
* FlyNets/GIF-DB
* KEGG
* Klotho
* MitBASE Pilot
* MPW
* RegulonDB
* UM-BBD

## Protein curation

* Endogenous GPCR List
* ENZYME
* ESTHER
* GenProtEC
* GPCRDB
* Histone Sequence Database
* IMGT
* InBase
* Kabat Database
* KEYnet
* LGIC
* LIGAND
* Membrane Protein Database
* MEROPS
* MHCPEP
* MITOP
* NRR
* ORDB
* Peptaibol Database
* PKR
* PPMdb
* Prolysis
* PROMISE
* REBASE
* RESID
* Wnt Database

## Protein sequence motifs

* Blocks Database
* HIV Molecular Immunology Database
* HSSP
* O-GLYCBASE
* Pfam
* PhosphoBase
* PIR-ALN
* PRINTS
* ProClass
* ProDom
* PROSITE
* SBASE
* SMART
* TransTerm

## Protein sequences

* AARSDB
* The Homeodomain Resource
* HUGE
* MIPS
* mitoDat
* PIR
* SWISS-PROT/TrEMBL

## Proteomics overview

* SWISS-2DPAGE
* TMIG-2DPAGE
* YPD

## RNA sequences

* 5S rRNA Data Bank
* Collection of mRNA-like Non-coding RNAs
* Database on The Structure of Large Ribosomal Subunit RNA
* Database on The Structure of Small Ribosomal Subunit RNA
* The Guide RNA Database
* PLMItRNA
* RDP
* The RNA Modification Database
* Small RNA Database
* tmRDB
* The tmRNA Website
* tRNA Sequences
* U-insertion/deletion Edited Sequence Database
* UTRdb
* The Viroid and Viroid-like RNA Database
* Yeast snoRNA Database

## Structure

* BioImage
* BMRB
* CATH
* CSD
* Database of Macromolecular Movements
* DPInteract
* DRC
* FSSP/Dali
* HIC-Up
* ISSD
* LPFC
* MMDB
* NDB
* PDB
* PRESAGE
* Protein Motions Database
* ProTherm
* The Ribonuclease P Database
* SCOP
* SRPDB

## Transgenics

* Cre Transgenic Database
* TBASE

## External Links

* Molecular Biology Database List - Database Category List - Nucleic Acids Research - Oxford Journals