mstz commited on
Commit
8fcdf22
1 Parent(s): 69ee9e0

Update yeast.py

Browse files
Files changed (1) hide show
  1. yeast.py +14 -11
yeast.py CHANGED
@@ -48,7 +48,7 @@ features_types_per_config = {
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  "gvh": datasets.Value("float64"),
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  "alm": datasets.Value("float64"),
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  "mit": datasets.Value("float64"),
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- "erl": datasets.Value("float64"),
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  "pox": datasets.Value("float64"),
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  "vac": datasets.Value("float64"),
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  "nuc": datasets.Value("float64"),
@@ -59,7 +59,7 @@ features_types_per_config = {
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  "gvh": datasets.Value("float64"),
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  "alm": datasets.Value("float64"),
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  "mit": datasets.Value("float64"),
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- "erl": datasets.Value("float64"),
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  "pox": datasets.Value("float64"),
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  "vac": datasets.Value("float64"),
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  "nuc": datasets.Value("float64"),
@@ -70,7 +70,7 @@ features_types_per_config = {
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  "gvh": datasets.Value("float64"),
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  "alm": datasets.Value("float64"),
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  "mit": datasets.Value("float64"),
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- "erl": datasets.Value("float64"),
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  "pox": datasets.Value("float64"),
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  "vac": datasets.Value("float64"),
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  "nuc": datasets.Value("float64"),
@@ -81,7 +81,7 @@ features_types_per_config = {
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  "gvh": datasets.Value("float64"),
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  "alm": datasets.Value("float64"),
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  "mit": datasets.Value("float64"),
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- "erl": datasets.Value("float64"),
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  "pox": datasets.Value("float64"),
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  "vac": datasets.Value("float64"),
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  "nuc": datasets.Value("float64"),
@@ -92,7 +92,7 @@ features_types_per_config = {
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  "gvh": datasets.Value("float64"),
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  "alm": datasets.Value("float64"),
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  "mit": datasets.Value("float64"),
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- "erl": datasets.Value("float64"),
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  "pox": datasets.Value("float64"),
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  "vac": datasets.Value("float64"),
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  "nuc": datasets.Value("float64"),
@@ -103,7 +103,7 @@ features_types_per_config = {
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  "gvh": datasets.Value("float64"),
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  "alm": datasets.Value("float64"),
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  "mit": datasets.Value("float64"),
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- "erl": datasets.Value("float64"),
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  "pox": datasets.Value("float64"),
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  "vac": datasets.Value("float64"),
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  "nuc": datasets.Value("float64"),
@@ -114,7 +114,7 @@ features_types_per_config = {
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  "gvh": datasets.Value("float64"),
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  "alm": datasets.Value("float64"),
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  "mit": datasets.Value("float64"),
117
- "erl": datasets.Value("float64"),
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  "pox": datasets.Value("float64"),
119
  "vac": datasets.Value("float64"),
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  "nuc": datasets.Value("float64"),
@@ -125,7 +125,7 @@ features_types_per_config = {
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  "gvh": datasets.Value("float64"),
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  "alm": datasets.Value("float64"),
127
  "mit": datasets.Value("float64"),
128
- "erl": datasets.Value("float64"),
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  "pox": datasets.Value("float64"),
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  "vac": datasets.Value("float64"),
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  "nuc": datasets.Value("float64"),
@@ -136,7 +136,7 @@ features_types_per_config = {
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  "gvh": datasets.Value("float64"),
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  "alm": datasets.Value("float64"),
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  "mit": datasets.Value("float64"),
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- "erl": datasets.Value("float64"),
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  "pox": datasets.Value("float64"),
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  "vac": datasets.Value("float64"),
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  "nuc": datasets.Value("float64"),
@@ -147,7 +147,7 @@ features_types_per_config = {
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  "gvh": datasets.Value("float64"),
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  "alm": datasets.Value("float64"),
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  "mit": datasets.Value("float64"),
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- "erl": datasets.Value("float64"),
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  "pox": datasets.Value("float64"),
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  "vac": datasets.Value("float64"),
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  "nuc": datasets.Value("float64"),
@@ -158,7 +158,7 @@ features_types_per_config = {
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  "gvh": datasets.Value("float64"),
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  "alm": datasets.Value("float64"),
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  "mit": datasets.Value("float64"),
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- "erl": datasets.Value("float64"),
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  "pox": datasets.Value("float64"),
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  "vac": datasets.Value("float64"),
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  "nuc": datasets.Value("float64"),
@@ -221,6 +221,9 @@ class Yeast(datasets.GeneratorBasedBuilder):
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  encoding_function = partial(self.encode, feature)
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  data.loc[:, feature] = data[feature].apply(encoding_function)
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  if self.config.name == "yeast_0":
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  data["class"] = data["class"].apply(lambda x: 1 if x == 0 else 0)
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  elif self.config.name == "yeast_1":
 
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  "gvh": datasets.Value("float64"),
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  "alm": datasets.Value("float64"),
50
  "mit": datasets.Value("float64"),
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+ "erl": datasets.Value("bool"),
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  "pox": datasets.Value("float64"),
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  "vac": datasets.Value("float64"),
54
  "nuc": datasets.Value("float64"),
 
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  "gvh": datasets.Value("float64"),
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  "alm": datasets.Value("float64"),
61
  "mit": datasets.Value("float64"),
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+ "erl": datasets.Value("bool"),
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  "pox": datasets.Value("float64"),
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  "vac": datasets.Value("float64"),
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  "nuc": datasets.Value("float64"),
 
70
  "gvh": datasets.Value("float64"),
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  "alm": datasets.Value("float64"),
72
  "mit": datasets.Value("float64"),
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+ "erl": datasets.Value("bool"),
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  "pox": datasets.Value("float64"),
75
  "vac": datasets.Value("float64"),
76
  "nuc": datasets.Value("float64"),
 
81
  "gvh": datasets.Value("float64"),
82
  "alm": datasets.Value("float64"),
83
  "mit": datasets.Value("float64"),
84
+ "erl": datasets.Value("bool"),
85
  "pox": datasets.Value("float64"),
86
  "vac": datasets.Value("float64"),
87
  "nuc": datasets.Value("float64"),
 
92
  "gvh": datasets.Value("float64"),
93
  "alm": datasets.Value("float64"),
94
  "mit": datasets.Value("float64"),
95
+ "erl": datasets.Value("bool"),
96
  "pox": datasets.Value("float64"),
97
  "vac": datasets.Value("float64"),
98
  "nuc": datasets.Value("float64"),
 
103
  "gvh": datasets.Value("float64"),
104
  "alm": datasets.Value("float64"),
105
  "mit": datasets.Value("float64"),
106
+ "erl": datasets.Value("bool"),
107
  "pox": datasets.Value("float64"),
108
  "vac": datasets.Value("float64"),
109
  "nuc": datasets.Value("float64"),
 
114
  "gvh": datasets.Value("float64"),
115
  "alm": datasets.Value("float64"),
116
  "mit": datasets.Value("float64"),
117
+ "erl": datasets.Value("bool"),
118
  "pox": datasets.Value("float64"),
119
  "vac": datasets.Value("float64"),
120
  "nuc": datasets.Value("float64"),
 
125
  "gvh": datasets.Value("float64"),
126
  "alm": datasets.Value("float64"),
127
  "mit": datasets.Value("float64"),
128
+ "erl": datasets.Value("bool"),
129
  "pox": datasets.Value("float64"),
130
  "vac": datasets.Value("float64"),
131
  "nuc": datasets.Value("float64"),
 
136
  "gvh": datasets.Value("float64"),
137
  "alm": datasets.Value("float64"),
138
  "mit": datasets.Value("float64"),
139
+ "erl": datasets.Value("bool"),
140
  "pox": datasets.Value("float64"),
141
  "vac": datasets.Value("float64"),
142
  "nuc": datasets.Value("float64"),
 
147
  "gvh": datasets.Value("float64"),
148
  "alm": datasets.Value("float64"),
149
  "mit": datasets.Value("float64"),
150
+ "erl": datasets.Value("bool"),
151
  "pox": datasets.Value("float64"),
152
  "vac": datasets.Value("float64"),
153
  "nuc": datasets.Value("float64"),
 
158
  "gvh": datasets.Value("float64"),
159
  "alm": datasets.Value("float64"),
160
  "mit": datasets.Value("float64"),
161
+ "erl": datasets.Value("bool"),
162
  "pox": datasets.Value("float64"),
163
  "vac": datasets.Value("float64"),
164
  "nuc": datasets.Value("float64"),
 
221
  encoding_function = partial(self.encode, feature)
222
  data.loc[:, feature] = data[feature].apply(encoding_function)
223
 
224
+ data["erl"] = data["erl"].apply(lambda x: True if x == 1 else False)
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+ data = data.astype({"erl": "bool"})
226
+
227
  if self.config.name == "yeast_0":
228
  data["class"] = data["class"].apply(lambda x: 1 if x == 0 else 0)
229
  elif self.config.name == "yeast_1":