datasets_to_embs.py

from __future__ import annotations
from dataclasses import dataclass
from typing import Generator
import numpy as np
from sentence_transformers import SentenceTransformer
from tqdm import tqdm
import torch
import argparse
from pathlib import Path
from datasets import load_dataset

parser = argparse.ArgumentParser(description="Convert datasets to embeddings")
parser.add_argument(
    "-t",
    "--target",
    type=str,
    required=True,
    choices=["data", "chunked"],
    help="target dataset, data or chunked",
)

parser.add_argument(
    "-d",
    "--debug",
    action="store_true",
    help="debug mode, use small dataset",
)
# model_name
parser.add_argument(
    "-m",
    "--model_name",
    type=str,
    required=True,
    help="huggingface model name",
)
# input_prefix
parser.add_argument(
    "-i",
    "--input_prefix",
    type=str,
    required=False,
    default="",
    help="input prefix",
)
# max_seq_length
parser.add_argument(
    "-l",
    "--max_seq_length",
    type=int,
    required=False,
    default=512,
    help="max sequence length",
)
# output_name
parser.add_argument(
    "-o",
    "--output_name",
    type=str,
    required=True,
    help="output dir",
)
args = parser.parse_args()


@dataclass
class EmbConfig:
    model_name: str
    input_prefix: str
    max_seq_length: int


args = parser.parse_args()

target_local_ds = args.target

EMB_CONFIG = EmbConfig(
    model_name=args.model_name,
    input_prefix=args.input_prefix,
    max_seq_length=args.max_seq_length,
)
embs_dir = f"embs{'_debug' if args.debug else ''}"

output_embs_path = Path("/".join([embs_dir, args.output_name, target_local_ds]))
output_embs_path.mkdir(parents=True, exist_ok=True)

print("output path:", output_embs_path)

MODEL = SentenceTransformer(EMB_CONFIG.model_name)
MODEL.max_seq_length = EMB_CONFIG.max_seq_length


def to_embs(texts: list[str], group_size=1024) -> Generator[np.ndarray, None, None]:
    group = []
    for text in texts:
        group.append(text)
        if len(group) == group_size:
            embeddings = MODEL.encode(
                group,
                normalize_embeddings=True,
                show_progress_bar=False,
            )
            yield embeddings  # type: ignore
            group = []
    if len(group) > 0:
        embeddings = MODEL.encode(
            group, normalize_embeddings=True, show_progress_bar=False
        )
        yield embeddings  # type: ignore


def _to_data_text(
    data, prefix=EMB_CONFIG.input_prefix, max_len=int(EMB_CONFIG.max_seq_length * 1.5)
):
    return (prefix + data["title"] + "\n" + data["text"])[0:max_len]


def _to_chunk_text(
    data, prefix=EMB_CONFIG.input_prefix, max_len=int(EMB_CONFIG.max_seq_length * 1.5)
):
    return (prefix + data["title"] + "\n" + data["overlap_text"] + data["text"])[
        :max_len
    ]


def ds_to_embs(
    ds,
    text_fn,
    group_size: int,
):
    texts = []
    total = len(ds)
    pbar = tqdm(total=total)
    # text は group_size 件ごとに処理する
    for i in range(0, total, group_size):
        texts = []
        for data in ds.select(range(i, min(i + group_size, total))):
            data: dict = data
            text = text_fn(data)
            texts.append(text)
        embs = []
        for group_embs in to_embs(texts):
            embs.append(group_embs)
            pbar.update(len(group_embs))
        embs = np.concatenate(embs)
        yield embs, i, pbar


if torch.cuda.is_available():
    print("use cuda")
    MODEL.to("cuda")
else:
    print("!! Warning: use cpu")

ds = load_dataset(args.target)["train"]  # type: ignore
to_text = _to_data_text if args.target == "data" else _to_chunk_text

if args.debug:
    print("debug mode")
    ds = ds.select(range(19998))  # type: ignore
    print("small dataset len:", len(ds))
    group_size = 10000
else:
    print("dataset len:", len(ds))
    group_size = 100_000

for embs, idx, pbar in ds_to_embs(ds, to_text, group_size=group_size):
    filename = f"{idx}.npz"
    filepath = output_embs_path / filename
    pbar.desc = f"saving...: {str(filepath)}"
    np.savez_compressed(filepath, embs=embs.astype(np.float16))
    pbar.desc = ""