metadata

language:
  - en
bigbio_language:
  - English
license: unknown
multilinguality: monolingual
bigbio_license_shortname: UNKNOWN
pretty_name: Verspoor 2013
homepage: NA
bigbio_pubmed: true
bigbio_public: true
bigbio_tasks:
  - NAMED_ENTITY_RECOGNITION
  - RELATION_EXTRACTION

Dataset Card for Verspoor 2013

Dataset Description

Homepage: NA
Pubmed: True
Public: True
Tasks: NER,RE

This dataset contains annotations for a small corpus of full text journal publications on the subject of inherited colorectal cancer. It is suitable for Named Entity Recognition and Relation Extraction tasks. It uses the Variome Annotation Schema, a schema that aims to capture the core concepts and relations relevant to cataloguing and interpreting human genetic variation and its relationship to disease, as described in the published literature. The schema was inspired by the needs of the database curators of the International Society for Gastrointestinal Hereditary Tumours (InSiGHT) database, but is intended to have application to genetic variation information in a range of diseases.

Citation Information

@article{verspoor2013annotating,
  title        = {Annotating the biomedical literature for the human variome},
  author       = {
    Verspoor, Karin and Jimeno Yepes, Antonio and Cavedon, Lawrence and
    McIntosh, Tara and Herten-Crabb, Asha and Thomas, Zo{"e} and Plazzer,
    John-Paul
  },
  year         = 2013,
  journal      = {Database},
  publisher    = {Oxford Academic},
  volume       = 2013
}