|
|
|
--- |
|
language: |
|
- en |
|
bigbio_language: |
|
- English |
|
license: cc-by-3.0 |
|
multilinguality: monolingual |
|
bigbio_license_shortname: CC_BY_3p0 |
|
pretty_name: OSIRIS |
|
homepage: https://sites.google.com/site/laurafurlongweb/databases-and-tools/corpora/ |
|
bigbio_pubmed: True |
|
bigbio_public: True |
|
bigbio_tasks: |
|
- NAMED_ENTITY_RECOGNITION |
|
- NAMED_ENTITY_DISAMBIGUATION |
|
--- |
|
|
|
|
|
# Dataset Card for OSIRIS |
|
|
|
## Dataset Description |
|
|
|
- **Homepage:** https://sites.google.com/site/laurafurlongweb/databases-and-tools/corpora/ |
|
- **Pubmed:** True |
|
- **Public:** True |
|
- **Tasks:** NER,NED |
|
|
|
|
|
The OSIRIS corpus is a set of MEDLINE abstracts manually annotated |
|
with human variation mentions. The corpus is distributed under the terms |
|
of the Creative Commons Attribution License |
|
Creative Commons Attribution 3.0 Unported License, |
|
which permits unrestricted use, distribution, and reproduction in any medium, |
|
provided the original work is properly cited (Furlong et al, BMC Bioinformatics 2008, 9:84). |
|
|
|
|
|
|
|
## Citation Information |
|
|
|
``` |
|
@ARTICLE{Furlong2008, |
|
author = {Laura I Furlong and Holger Dach and Martin Hofmann-Apitius and Ferran Sanz}, |
|
title = {OSIRISv1.2: a named entity recognition system for sequence variants |
|
of genes in biomedical literature.}, |
|
journal = {BMC Bioinformatics}, |
|
year = {2008}, |
|
volume = {9}, |
|
pages = {84}, |
|
doi = {10.1186/1471-2105-9-84}, |
|
pii = {1471-2105-9-84}, |
|
pmid = {18251998}, |
|
timestamp = {2013.01.15}, |
|
url = {http://dx.doi.org/10.1186/1471-2105-9-84} |
|
} |
|
|
|
``` |
|
|
