|
|
|
--- |
|
language: |
|
- en |
|
bigbio_language: |
|
- English |
|
license: other |
|
multilinguality: monolingual |
|
bigbio_license_shortname: GENIA_PROJECT_LICENSE |
|
pretty_name: GENIA Term Corpus |
|
homepage: http://www.geniaproject.org/genia-corpus/term-corpus |
|
bigbio_pubmed: True |
|
bigbio_public: True |
|
bigbio_tasks: |
|
- NAMED_ENTITY_RECOGNITION |
|
--- |
|
|
|
|
|
# Dataset Card for GENIA Term Corpus |
|
|
|
## Dataset Description |
|
|
|
- **Homepage:** http://www.geniaproject.org/genia-corpus/term-corpus |
|
- **Pubmed:** True |
|
- **Public:** True |
|
- **Tasks:** NER |
|
|
|
|
|
The identification of linguistic expressions referring to entities of interest in molecular biology such as proteins, |
|
genes and cells is a fundamental task in biomolecular text mining. The GENIA technical term annotation covers the |
|
identification of physical biological entities as well as other important terms. The corpus annotation covers the full |
|
1,999 abstracts of the primary GENIA corpus. |
|
|
|
|
|
|
|
## Citation Information |
|
|
|
``` |
|
@inproceedings{10.5555/1289189.1289260, |
|
author = {Ohta, Tomoko and Tateisi, Yuka and Kim, Jin-Dong}, |
|
title = {The GENIA Corpus: An Annotated Research Abstract Corpus in Molecular Biology Domain}, |
|
year = {2002}, |
|
publisher = {Morgan Kaufmann Publishers Inc.}, |
|
address = {San Francisco, CA, USA}, |
|
booktitle = {Proceedings of the Second International Conference on Human Language Technology Research}, |
|
pages = {82–86}, |
|
numpages = {5}, |
|
location = {San Diego, California}, |
|
series = {HLT '02} |
|
} |
|
|
|
@article{Kim2003GENIAC, |
|
title={GENIA corpus - a semantically annotated corpus for bio-textmining}, |
|
author={Jin-Dong Kim and Tomoko Ohta and Yuka Tateisi and Junichi Tsujii}, |
|
journal={Bioinformatics}, |
|
year={2003}, |
|
volume={19 Suppl 1}, |
|
pages={ |
|
i180-2 |
|
} |
|
} |
|
|
|
@inproceedings{10.5555/1567594.1567610, |
|
author = {Kim, Jin-Dong and Ohta, Tomoko and Tsuruoka, Yoshimasa and Tateisi, Yuka and Collier, Nigel}, |
|
title = {Introduction to the Bio-Entity Recognition Task at JNLPBA}, |
|
year = {2004}, |
|
publisher = {Association for Computational Linguistics}, |
|
address = {USA}, |
|
booktitle = {Proceedings of the International Joint Workshop on Natural Language Processing in Biomedicine and Its |
|
Applications}, |
|
pages = {70–75}, |
|
numpages = {6}, |
|
location = {Geneva, Switzerland}, |
|
series = {JNLPBA '04} |
|
} |
|
|
|
``` |
|
|
