gabrielaltay commited on
Commit
9f06912
1 Parent(s): 409b6da

upload hub_repos/bioid/README.md to hub from bigbio repo

Browse files
Files changed (1) hide show
  1. README.md +46 -0
README.md ADDED
@@ -0,0 +1,46 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ---
2
+ language:
3
+ - en
4
+ bigbio_language:
5
+ - English
6
+ license: other
7
+ bigbio_license_shortname: UNKNOWN
8
+ multilinguality: monolingual
9
+ pretty_name: Bio-ID
10
+ homepage: https://biocreative.bioinformatics.udel.edu/tasks/biocreative-vi/track-1/
11
+ bigbio_pubmed: true
12
+ bigbio_public: true
13
+ bigbio_tasks:
14
+ - NAMED_ENTITY_RECOGNITION
15
+ - NAMED_ENTITY_DISAMBIGUATION
16
+ ---
17
+
18
+
19
+ # Dataset Card for Bio-ID
20
+
21
+ ## Dataset Description
22
+
23
+ - **Homepage:** https://biocreative.bioinformatics.udel.edu/tasks/biocreative-vi/track-1/
24
+ - **Pubmed:** True
25
+ - **Public:** True
26
+ - **Tasks:** NER,NED
27
+
28
+
29
+ The Bio-ID track focuses on entity tagging and ID assignment to selected bioentity types.
30
+ The task is to annotate text from figure legends with the entity types and IDs for taxon (organism), gene, protein, miRNA, small molecules,
31
+ cellular components, cell types and cell lines, tissues and organs. The track draws on SourceData annotated figure
32
+ legends (by panel), in BioC format, and the corresponding full text articles (also BioC format) provided for context.
33
+
34
+
35
+ ## Citation Information
36
+
37
+ ```
38
+ @inproceedings{arighi2017bio,
39
+ title={Bio-ID track overview},
40
+ author={Arighi, Cecilia and Hirschman, Lynette and Lemberger, Thomas and Bayer, Samuel and Liechti, Robin and Comeau, Donald and Wu, Cathy},
41
+ booktitle={Proc. BioCreative Workshop},
42
+ volume={482},
43
+ pages={376},
44
+ year={2017}
45
+ }
46
+ ```