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SciRIFF / README.md
David Wadden
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metadata
dataset_info:
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configs:
  - config_name: '16384'
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      - split: train
        path: 16384/train-*
      - split: validation
        path: 16384/validation-*
      - split: test
        path: 16384/test-*
  - config_name: '4096'
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      - split: validation
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      - split: test
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    data_files:
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      - split: validation
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license: odc-by
language:
  - en
tags:
  - chemistry
  - biomedicine
  - clinical medicine
  - artificial intelligence
  - materials science
size_categories:
  - 100K<n<1M

SciRIFF

The SciRIFF dataset includes 137K instruction-following demonstrations for 54 scientific literature understanding tasks. The tasks cover five essential scientific literature categories and span five domains.

License

SciRIFF is licensed under ODC-By.

Task provenance

SciRIFF was created by repurposing existing scientific literature understanding datasets. Below we provide information on the source data for each SciRIFF task, including license information on individual datasets where available.

SciRIFF Name Paper Link License Website / Download Link
acl_arc_intent_classification ACL ARC - https://github.com/allenai/scicite/
anat_em_ner AnatEM CC BY https://nactem.ac.uk/anatomytagger/#AnatEM
annotated_materials_syntheses_events Materials Science Procedural Text Corpus MIT https://github.com/olivettigroup/annotated-materials-syntheses
bc7_litcovid_topic_classification BioCreative VII LitCOVID - https://biocreative.bioinformatics.udel.edu/tasks/biocreative-vii/track-5/
bioasq_{factoid,general,list,yesno}_qa BioASQ CC BY http://bioasq.org/
biored_ner BioRED - https://ftp.ncbi.nlm.nih.gov/pub/lu/BioRED/
cdr_ner BioCreative V CDR - https://biocreative.bioinformatics.udel.edu/tasks/biocreative-v/track-3-cdr/
chemdner_ner CHEMDNER - https://biocreative.bioinformatics.udel.edu/resources/biocreative-iv/chemdner-corpus/
chemprot_{ner,re} BioCreative VI ChemProt - https://biocreative.bioinformatics.udel.edu/news/corpora/chemprot-corpus-biocreative-vi/
chemsum_single_document_summarization ChemSum - https://github.com/griff4692/calibrating-summaries
chemtables_te ChemTables GPL 3.0 https://huggingface.co/datasets/fbaigt/schema-to-json
chia_ner Chia CC BY https://github.com/WengLab-InformaticsResearch/CHIA
covid_deepset_qa COVID-QA Apache 2.0 https://github.com/deepset-ai/COVID-QA
covidfact_entailment CovidFact - https://github.com/asaakyan/covidfact
craftchem_ner CRAFT-Chem - https://huggingface.co/datasets/ghadeermobasher/CRAFT-Chem
data_reco_mcq_{mc,sc} DataFinder Apache 2.0 https://github.com/viswavi/datafinder/tree/main
ddi_ner DDI CC BY https://github.com/isegura/DDICorpus
discomat_te DISCoMaT CC BY-SA https://github.com/M3RG-IITD/DiSCoMaT
drug_combo_extraction_re Drug Combinations - https://github.com/allenai/drug-combo-extraction
evidence_inference Evidence inference MIT https://evidence-inference.ebm-nlp.com/
genia_ner JNLPBA CC BY https://github.com/spyysalo/jnlpba
gnormplus_ner GNormPlus - https://www.ncbi.nlm.nih.gov/research/bionlp/Tools/gnormplus/
healthver_entailment HealthVer nan https://github.com/sarrouti/healthver
linnaeus_ner LINNAEUS CC BY https://sourceforge.net/projects/linnaeus/
medmentions_ner MedMentions CC 0 https://github.com/chanzuckerberg/MedMentions
mltables_te AxCell Apache 2.0 https://github.com/paperswithcode/axcell
mslr2022_cochrane_multidoc_summarization Cochrane Apache 2.0 https://github.com/allenai/mslr-shared-task
mslr2022_ms2_multidoc_summarization MS^2 Apache 2.0 https://github.com/allenai/mslr-shared-task
multicite_intent_classification MultiCite CC BY-NC https://github.com/allenai/multicite
multixscience_multidoc_summarization Multi-XScience MIT https://github.com/yaolu/Multi-XScience
mup_single_document_summarization MUP Apache 2.0 https://github.com/allenai/mup
ncbi_ner NCBI Disease CC 0 https://www.ncbi.nlm.nih.gov/CBBresearch/Dogan/DISEASE/
nlmchem_ner NLM-Chem CC 0 https://ftp.ncbi.nlm.nih.gov/pub/lu/BC7-NLM-Chem-track/
nlmgene_ner NLM-Gene CC 0 https://ftp.ncbi.nlm.nih.gov/pub/lu/NLMGene/
pico_ner EBM-NLP PICO - https://github.com/bepnye/EBM-NLP
pubmedqa_qa PubMedQA MIT https://github.com/pubmedqa/pubmedqa
qasa_abstractive_qa QASA MIT https://github.com/lgresearch/QASA
qasper_{abstractive,extractive}_qa Qasper CC BY https://allenai.org/data/qasper
scicite_classification SciCite - https://allenai.org/data/scicite
scientific_lay_summarisation_
{elife,plos}_single_doc_summ
Lay Summarisation - https://github.com/TGoldsack1/Corpora_for_Lay_Summarisation
scientific_papers_summarization_
single_doc_{arxiv,pubmed}
Scientific Papers - https://huggingface.co/datasets/armanc/scientific_papers
scierc_{ner,re} SciERC - http://nlp.cs.washington.edu/sciIE/
scifact_entailment SciFact CC BY-NC https://allenai.org/data/scifact
scireviewgen_multidoc_summarization SciReviewGen CC BY-NC https://github.com/tetsu9923/SciReviewGen
scitldr_aic SciTLDR Apache 2.0 https://github.com/allenai/scitldr