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README.md

@@ -24,6 +24,7 @@ This repository contains the final public training-data release used for CodonTr
 - `embeddings_v2/`: precomputed species conditioning embeddings used in training
 - `_work/final_representative_counts.json`: final released split sizes
 - `_work/split_report.json`: split audit report
+- `_work/mmseqs_manifest.json`: MMseqs version and clustering parameters
 - `_work/cluster_split.parquet`: cluster-level split assignments
 - `_work/seq_cluster.parquet`: MMseqs cluster assignments
 - `_work/seq_split.parquet`: split assignments before representative selection
@@ -84,3 +85,5 @@ The corresponding public model and code release is:
 ## Attribution
 
 This release redistributes processed training data and derived embeddings for reproducibility of the CodonTranslator experiments. See the audit files in `_work/` for construction details and final verification outputs.
+
+The raw MMseqs working database is not included because it is large, machine-specific intermediate state. The released `_work/` files are the reproducibility artifacts needed to audit and reconstruct the clustering and split decisions.