BioNet / edge /CTD_chem_gene_ixn_types.tsv
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# The Comparative Toxicogenomics Database (CTD) - http://ctdbase.org/
# Copyright 2002-2012 MDI Biological Laboratory. All rights reserved.
# Copyright 2012-2016 MDI Biological Laboratory & NC State University. All rights reserved.
#
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# These terms include:
#
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# must cite CTD.
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# More information: http://ctdbase.org/downloads/
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# Report created: Fri Jul 06 11:10:38 EDT 2012
#
# Fields:
# TypeName Code Description ParentCode
#
abundance abu The abundance of a chemical (if chemical synthesis is not known).
activity act An elemental function of a molecule.
binding b A molecular interaction.
cotreatment w Involving the use of two or more chemicals simultaneously.
expression exp The expression of a gene product.
folding fol The bending and positioning of a molecule to achieve conformational integrity.
localization loc Part of the cell where a molecule resides.
metabolic processing met The biochemical alteration of a molecule's structure (does not include changes in expression, stability, folding, localization, splicing, or transport).
acetylation ace The addition of an acetyl group. met
acylation acy The addition of an acyl group. met
alkylation alk The addition of an alkyl group. met
amination ami The addition of an amine group. met
carbamoylation car The addition of a carbamoyl group. met
carboxylation cox The addition of a carboxyl group. met
chemical synthesis csy A biochemical event resulting in a new chemical product. met
degradation deg Catabolism or breakdown. met
cleavage clv The processing or splitting of a molecule, not necessarily leading to the destruction of the molecule. deg
hydrolysis hyd The splitting of a molecule via the specific use of water. clv
ethylation eth The addition of an ethyl group. met
glutathionylation glt The addition of a glutathione group. met
glycation gyc The non-enzymatic addition of a sugar. met
glycosylation gly The addition of a sugar group. met
glucuronidation glc The addition of a sugar group to form a glucuronide, typically part of an inactivating or detoxifying reaction. gly
N-linked glycosylation ngl The addition of a sugar group to an amide nitrogen. gly
O-linked glycosylation ogl The addition of a sugar group to a hydroxyl group. gly
hydroxylation hdx The addition of a hydroxy group. met
lipidation lip The addition of a lipid group. met
farnesylation far The addition of a farnesyl group. lip
geranoylation ger The addition of a geranoyl group. lip
myristoylation myr The addition of a myristoyl group. lip
palmitoylation pal The addition of a palmitoyl group. lip
prenylation pre The addition of a prenyl group. lip
methylation myl The addition of a methyl group. met
nitrosation nit The addition of a nitroso or nitrosyl group. met
nucleotidylation nuc The addition of a nucleotidyl group. met
oxidation oxd The loss of electrons. met
phosphorylation pho The addition of a phosphate group. met
reduction red The gain of electrons. met
ribosylation rib The addition of a ribosyl group. met
ADP-ribosylation arb The addition of a ADP-ribosyl group. rib
sulfation sul The addition of a sulfate group. met
sumoylation sum The addition of a SUMO group. met
ubiquitination ubq The addition of an ubiquitin group. met
mutagenesis mut The genetic alteration of a gene product.
reaction rxn Any general biochemical or molecular event.
response to substance rec Resistance or sensitivity to a substance.
splicing spl The removal of introns to generate mRNA.
stability sta Overall molecular integrity.
transport trt The movement of a molecule into or out of a cell.
secretion sec The movement of a molecule out of a cell (by less specific means than export). trt
export ext The movement of a molecule out of a cell (by more specific means than secretion). sec
uptake upt The movement of a molecule into a cell (by less specific means than import). trt
import imt The movement of a molecule into a cell (by more specific means than uptake). upt