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  1. .gitattributes +34 -0
  2. README.md +105 -3
  3. images/warwick_stem_00771.tif +3 -0
  4. images/warwick_stem_00859.tif +0 -0
  5. images/warwick_stem_01325.tif +3 -0
  6. images/warwick_stem_01344.tif +3 -0
  7. images/warwick_stem_01825.tif +3 -0
  8. images/warwick_stem_02350.tif +3 -0
  9. images/warwick_stem_02906.tif +3 -0
  10. images/warwick_stem_04052.tif +3 -0
  11. images/warwick_stem_04189.tif +3 -0
  12. images/warwick_stem_05178.tif +0 -0
  13. images/warwick_stem_05179.tif +0 -0
  14. images/warwick_stem_05182.tif +0 -0
  15. images/warwick_stem_05275.tif +3 -0
  16. images/warwick_stem_05341.tif +3 -0
  17. images/warwick_stem_05866.tif +3 -0
  18. images/warwick_stem_08058.tif +3 -0
  19. images/warwick_stem_08163.tif +3 -0
  20. images/warwick_stem_08191.tif +0 -0
  21. images/warwick_stem_08458.tif +3 -0
  22. images/warwick_stem_08460.tif +0 -0
  23. images/warwick_stem_08499.tif +0 -0
  24. images/warwick_stem_08984.tif +0 -0
  25. images/warwick_stem_09495.tif +3 -0
  26. images/warwick_stem_10536.tif +0 -0
  27. images/warwick_stem_10614.tif +0 -0
  28. images/warwick_stem_10692.tif +0 -0
  29. images/warwick_stem_10920.tif +3 -0
  30. images/warwick_stem_11208.tif +3 -0
  31. images/warwick_stem_11673.tif +3 -0
  32. images/warwick_stem_13063.tif +0 -0
  33. images/warwick_stem_13147.tif +0 -0
  34. images/warwick_stem_13429.tif +0 -0
  35. images/warwick_stem_13906.tif +3 -0
  36. images/warwick_stem_14464.tif +3 -0
  37. images/warwick_stem_16029.tif +3 -0
  38. images/warwick_stem_16095.tif +3 -0
  39. images/warwick_stem_16444.tif +3 -0
  40. images/warwick_stem_17376.tif +3 -0
  41. images/warwick_stem_17548.tif +3 -0
  42. images/warwick_stem_18008.tif +3 -0
  43. images/warwick_stem_18154.tif +3 -0
  44. images/warwick_stem_18165.tif +3 -0
  45. images/warwick_stem_18288.tif +3 -0
  46. images/warwick_stem_18383.tif +3 -0
  47. images/warwick_stem_19266.tif +3 -0
  48. images/warwick_stem_19361.tif +3 -0
  49. images/warwick_stem_19443.tif +3 -0
  50. images/warwick_stem_19500.tif +3 -0
.gitattributes CHANGED
@@ -58,3 +58,37 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
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  # Video files - compressed
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  *.mp4 filter=lfs diff=lfs merge=lfs -text
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  *.webm filter=lfs diff=lfs merge=lfs -text
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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  # Video files - compressed
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  *.mp4 filter=lfs diff=lfs merge=lfs -text
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  *.webm filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_13906.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_01344.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_08458.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_18383.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_17548.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_09495.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_11208.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_02350.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_08163.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_04189.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_18288.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_04052.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_02906.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_18154.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_14464.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_11673.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_01825.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_01325.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_19500.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_19443.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_16029.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_00771.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_17376.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_05275.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_19266.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_10920.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_05341.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_19361.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_05866.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_18008.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_16095.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_08058.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_18165.tif filter=lfs diff=lfs merge=lfs -text
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+ images/warwick_stem_16444.tif filter=lfs diff=lfs merge=lfs -text
README.md CHANGED
@@ -1,3 +1,105 @@
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- ---
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- license: cc-by-4.0
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- ---
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ ---
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+ license: cc-by-4.0
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+ task_categories:
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+ - image-to-image
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+ - unconditional-image-generation
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+ tags:
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+ - microscopy
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+ - electron-microscopy
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+ - STEM
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+ - materials-science
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+ size_categories:
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+ - 10K<n<100K
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+ configs:
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+ - config_name: default
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+ data_files:
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+ - split: train
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+ path:
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+ - metadata.csv
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+ dataset_info:
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+ features:
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+ - name: file_name
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+ dtype: image
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+ - name: original_filename
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+ dtype: string
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+ - name: width
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+ dtype: int32
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+ - name: height
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+ dtype: int32
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+ - name: dtype
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+ dtype: string
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+ - name: min_value
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+ dtype: float32
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+ - name: max_value
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+ dtype: float32
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+ - name: mean_value
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+ dtype: float32
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+ - name: std_value
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+ dtype: float32
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+ ---
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+
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+ # Warwick STEM Dataset
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+
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+ A collection of 19,769 experimental scanning transmission electron microscopy (STEM) images from the University of Warwick, spanning hundreds of diverse materials projects collected between 2010 and 2018.
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+
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+ ## Dataset Description
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+
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+ This dataset contains experimental STEM images originally published as part of the [Warwick Electron Microscopy Datasets](https://github.com/Jeffrey-Ede/datasets) by Jeffrey Ede. The images cover a wide range of materials and imaging conditions, making them useful for self-supervised pre-training of microscopy foundation models.
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+
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+ ## Dataset Structure
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+
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+ ```
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+ warwick_stem_dataset/
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+ ├── README.md
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+ ├── metadata.csv
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+ └── images/
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+ ├── warwick_stem_00000.tif
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+ ├── warwick_stem_00001.tif
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+ └── ... (19,769 images)
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+ ```
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+
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+ ### Metadata Fields
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+
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+ | Field | Type | Description |
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+ |-------|------|-------------|
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+ | `file_name` | string | Relative path to the TIFF image |
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+ | `original_filename` | string | Original filename from the Warwick dataset |
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+ | `width` | int | Image width in pixels |
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+ | `height` | int | Image height in pixels |
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+ | `dtype` | string | Pixel data type (float32) |
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+ | `min_value` | float | Minimum pixel intensity |
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+ | `max_value` | float | Maximum pixel intensity |
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+ | `mean_value` | float | Mean pixel intensity |
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+ | `std_value` | float | Standard deviation of pixel intensity |
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+
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+ ### Image Properties
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+
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+ - **Format:** 32-bit float TIFF
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+ - **Resolutions:** Mixed, predominantly 2048x2048 (47%), 1024x1024 (34%), and 512x512 (9%), with various other sizes
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+ - **Modality:** STEM (various detector configurations)
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+ - **Instruments:** Multiple instruments across the University of Warwick (2010-2018)
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+
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+ ### Resolution Distribution
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+
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+ | Resolution | Count | Percentage |
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+ |------------|-------|------------|
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+ | 2048x2048 | 7,950 | 40% |
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+ | 1024x1024 | 6,716 | 34% |
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+ | 512x512 | 3,082 | 16% |
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+ | Other | 2,021 | 10% |
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+
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+ ## Usage
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+
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+ ```python
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+ from datasets import load_dataset
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+
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+ ds = load_dataset("path/to/warwick_stem_dataset")
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+ ```
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+
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+ ## Source
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+
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+ Original data from [Jeffrey-Ede/datasets](https://github.com/Jeffrey-Ede/datasets) on GitHub. Please cite the original work if you use this dataset.
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+
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+ ## License
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+
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+ CC-BY-4.0
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