| # from a base directory | |
| git clone https://<user_name>:<security_token>huggingface.co/RosettaCommons/MegaScale | |
| # needed to get splits | |
| cd data && git clone https://github.com/Kuhlman-Lab/ThermoMPNN.git | |
| # Run each numbered script in MegaScale/src/ in order (starting with this one) | |
| # | |
| # Tips: | |
| # 1) Make sure to set the working directory to the base directory (outside of the HF repo) | |
| # 2) While most of the scripts should work, I recommend running them interactively | |
| # 3) Some stages require more memory than others, all can be done with < 400GB of memory | |
| # but perhaps more more could reduce memory requirements | |
| # 4) | |