PMCID
string | Sentences
string | ner
list |
|---|---|---|
PMC9429973
|
Notably, similar Ab levels were observed in those infected with Omicron and in non-infected pts, reflecting the genetic drift of this variant.
|
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PMC11001582
|
c,d, Representative confocal images of immunofluorescence staining showing absence of colocalization between the astrocytic markers S100β (c) or GFAP (d) (yellow) and HA-tag (red) in (GR)400 mouse brain cortex (c) and lumbar spinal cord ventral horn (d) at 6 months of age, n = 5 mice per genotype.
|
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PMC10204952
|
The experimental data were analyzed by one-way ANOVA for each individual type of cell culture media series and two-way ANOVA followed by Tukey’s post-hoc test on three types of cell culture media series.
|
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] |
PMC11397654
|
The formation of a self-inclusion complex (i.e., intramolecular host–guest conjugate), rather than intermolecular polymerisation, was confirmed by NMR spectroscopy and trapped ion mobility spectrometry−mass spectrometry (TIMS–MS).
|
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PMC11750712
|
Lymph node ddPCR AUTO4 copy number ranged from 111 to 171,700 VCN per μg DNA.
|
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] |
PMC11551844
|
Gold nanoparticles (AuNPs) exhibit different physical properties compared to small molecules, bulk materials and other nanoparticles.
|
[
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"O",
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PMC11478724
|
This was done to identify possible miRNA targets on VDAC1 and STAT3.
|
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]
}
] |
PMC10652261
|
HRMS (m/z): [M + H] calcd for C24H25ClN4S: 437.1561.
|
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PMC8345486
|
Spheroid disintegration under the influence of cisplatin was mainly observed in the A2780 line and its sublines.
|
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PMC10745221
|
These results indicate that no observable changes in protein arginine methylation accompany the reversion from the methionine-addicted and metastatic phenotype of the parent cells.
|
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] |
PMC9429973
|
40% were male 60% female, the median age was 61 yrs. (
|
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PMC11098378
|
After cultures reached an OD600 of 0.4–0.5, protein expression was induced with 0.2 mM IPTG overnight at 18°C.
|
[
{
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"O",
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] |
PMC11678841
|
In this in vitro study, we assessed for the first time the potential of α-TOH and the vitamin E metabolite GA in modulating the epithelial immune response to C. albicans infection.
|
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PMC11694346
|
These advantages include tunable optical properties, fast response times, high sensitivity (even at micromolar concentrations), cost-effectiveness and straightforward operational procedures.
|
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PMC8751435
|
Briefly, cells were seeded in 96‐well plates at a density of 1 × 10 cells/well and treated with different concentrations of CME (0, 1, 10, 100, 200, 400, 600, 800, and 1000 μg/ml) for 24, 48, or 72 h, and cells were observed by using microscope before addition of CCK‐8.
|
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PMC11637820
|
Interestingly, our study revealed gram-positive bacteria to be more sensitive to CAP than gram-negative microbes.
|
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"O",
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] |
PMC10669966
|
Antigens were detected with SuperSignal™ West Pico PLUS chemiluminescent substrate (Cat.
|
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PMC11718274
|
Meanwhile, exposure of A-431 cancer cells to Y2O3NPs also significantly elevated the expression level of apoptotic p53 and mitochondrial ND3 genes compared to the elevations induced by doxorubicin treatment as depicted in Table 5.
|
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"in",
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"5",
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]
}
] |
PMC8409415
|
The identity of each cell line was confirmed by DNA fingerprinting using short tandem repeat profiling., ,
|
[
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"O",
"O",
"O",
"O",
"O",
"O",
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}
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PMC10965680
|
In conclusion, for the first time, a comparative analysis of the Xiangdong black goat genome with those of other goat populations in China revealed genetic diversity, population genetic structure, and selection signals related to environmental adaptation-specific traits.
|
[
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"traits",
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]
}
] |
PMC11489351
|
EIPA, 5-(N-ethyl-N-isopropyl) amiloride; NH4Cl, ammonium chloride; pHi, intracellular pH. In addition to these pronounced pH-dependent changes in glycolytic enzyme expression, our RNA-Seq analysis also revealed pHi-dependent transcription of several enzymes regulating pyruvate fate (Fig. 5B).
|
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PMC9429973
|
Integrative analysis revealed 118 proteins that were differentially expressed and/or precipitated by GATA1-IP, of which 49 were enriched in malignant and 69 proteins in normal erythroblasts (q<0.5).
|
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"O",
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"O",
"O",
"O",
"O"
],
"tokens": [
"Integrative",
"analysis",
"revealed",
"118",
"proteins",
"that",
"were",
"differentially",
"expressed",
"and/or",
"precipitated",
"by",
"GATA1-IP",
",",
"of",
"which",
"49",
"were",
"enriched",
"in",
"malignant",
"and",
"69",
"proteins",
"in",
"normal",
"erythroblasts",
"(",
"q<0.5",
")",
"."
]
}
] |
PMC11792090
|
Blood samples were collected 8 days post infusion.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Blood",
"samples",
"were",
"collected",
"8",
"days",
"post",
"infusion",
"."
]
}
] |
PMC11535726
|
In addition, the comparison of the nucleotides between the sequences of K.bulbosapicalis and K.dujuanhuensis showed differences of 9% (47/512 bp) across ITS, 1% (8/812 bp) across LSU and 0.1% (2/1003 bp) across SSU, excluding gaps.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"In",
"addition",
",",
"the",
"comparison",
"of",
"the",
"nucleotides",
"between",
"the",
"sequences",
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"%",
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"47/512",
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"across",
"ITS",
",",
"1",
"%",
"(",
"8/812",
"bp",
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"across",
"LSU",
"and",
"0.1",
"%",
"(",
"2/1003",
"bp",
")",
"across",
"SSU",
",",
"excluding",
"gaps",
"."
]
}
] |
PMC11779876
|
Comprehensive clonality profiling will therefore be mandatory for effective allocation of these complex cellular therapies.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Comprehensive",
"clonality",
"profiling",
"will",
"therefore",
"be",
"mandatory",
"for",
"effective",
"allocation",
"of",
"these",
"complex",
"cellular",
"therapies",
"."
]
}
] |
PMC11755624
|
Its overexpression suppresses the activity of PI3K/AKT/mTOR in TNF-stimulated keratinocytes, which was associated with suppressed inflammation .
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Its",
"overexpression",
"suppresses",
"the",
"activity",
"of",
"PI3K/AKT/mTOR",
"in",
"TNF-stimulated",
"keratinocytes",
",",
"which",
"was",
"associated",
"with",
"suppressed",
"inflammation",
"."
]
}
] |
PMC11216402
|
The median CV AUROC is 0.925.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"The",
"median",
"CV",
"AUROC",
"is",
"0.925",
"."
]
}
] |
PMC11291697
|
In fact, altered glycine and D-serine levels have been related to the development of kindling epileptogenesis in mice .
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"In",
"fact",
",",
"altered",
"glycine",
"and",
"D-serine",
"levels",
"have",
"been",
"related",
"to",
"the",
"development",
"of",
"kindling",
"epileptogenesis",
"in",
"mice",
"."
]
}
] |
PMC11763111
|
E The mean value of average radiance in each group of mice was monitored using bioluminescence in order to compare the therapeutic efficacy of 4KO-LLT1 CAR-T with that of other CAR-T cells.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"E",
"The",
"mean",
"value",
"of",
"average",
"radiance",
"in",
"each",
"group",
"of",
"mice",
"was",
"monitored",
"using",
"bioluminescence",
"in",
"order",
"to",
"compare",
"the",
"therapeutic",
"efficacy",
"of",
"4KO-LLT1",
"CAR-T",
"with",
"that",
"of",
"other",
"CAR-T",
"cells",
"."
]
}
] |
PMC8357004
|
Other modifications include histone deacetylation affect local compaction of chromatin structure leads to TSGs silencing.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Other",
"modifications",
"include",
"histone",
"deacetylation",
"affect",
"local",
"compaction",
"of",
"chromatin",
"structure",
"leads",
"to",
"TSGs",
"silencing",
"."
]
}
] |
PMC11011837
|
By digging into the molecular phenotype of these cell lines, we aim to identify potential variations among them, possibly allowing for the classification and stratification of the different cell lines at the metabolic level, unraveling differences, or similarities, in the same genetic subgroup.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"By",
"digging",
"into",
"the",
"molecular",
"phenotype",
"of",
"these",
"cell",
"lines",
",",
"we",
"aim",
"to",
"identify",
"potential",
"variations",
"among",
"them",
",",
"possibly",
"allowing",
"for",
"the",
"classification",
"and",
"stratification",
"of",
"the",
"different",
"cell",
"lines",
"at",
"the",
"metabolic",
"level",
",",
"unraveling",
"differences",
",",
"or",
"similarities",
",",
"in",
"the",
"same",
"genetic",
"subgroup",
"."
]
}
] |
PMC11795610
|
It has been shown that myricetin significantly reduces the secretion of pro-inflammatory cytokines, such as IL-1β and IL-10, and has inhibitory effect on inflammation induced by LPS.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"It",
"has",
"been",
"shown",
"that",
"myricetin",
"significantly",
"reduces",
"the",
"secretion",
"of",
"pro-inflammatory",
"cytokines",
",",
"such",
"as",
"IL-1β",
"and",
"IL-10",
",",
"and",
"has",
"inhibitory",
"effect",
"on",
"inflammation",
"induced",
"by",
"LPS",
"."
]
}
] |
PMC11711663
|
Clinical data were extracted from the MD Anderson Cancer Center’s custom electronic medical record system.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Clinical",
"data",
"were",
"extracted",
"from",
"the",
"MD",
"Anderson",
"Cancer",
"Center",
"’s",
"custom",
"electronic",
"medical",
"record",
"system",
"."
]
}
] |
PMC11538390
|
Allele frequency was estimated using birthplace data of 306,678 FinnGen study participants.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Allele",
"frequency",
"was",
"estimated",
"using",
"birthplace",
"data",
"of",
"306,678",
"FinnGen",
"study",
"participants",
"."
]
}
] |
PMC11566417
|
The inoculum was aliquoted into four wells of a 96-well plate at 200 µL/well for a concentration of 5000 CFU/well.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"The",
"inoculum",
"was",
"aliquoted",
"into",
"four",
"wells",
"of",
"a",
"96-well",
"plate",
"at",
"200",
"µL/well",
"for",
"a",
"concentration",
"of",
"5000",
"CFU/well",
"."
]
}
] |
PMC9429973
|
Forced SETD2 re-expression was obtained by nucleofection: 10 HMC-1.2 cells were resuspended in 85μl of cell line Nucleofector Solution V and 2μg of a SETD2 (GFP-tagged) construct were added.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"B-CellLine",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Forced",
"SETD2",
"re-expression",
"was",
"obtained",
"by",
"nucleofection",
":",
"10",
"HMC-1.2",
"cells",
"were",
"resuspended",
"in",
"85μl",
"of",
"cell",
"line",
"Nucleofector",
"Solution",
"V",
"and",
"2μg",
"of",
"a",
"SETD2",
"(",
"GFP-tagged",
")",
"construct",
"were",
"added",
"."
]
}
] |
PMC11055443
|
Thus, inhibition of metalloproteases by TIMPs inhibits the access and attachment of bacteria to the Caco-2 cells.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"B-CellLine",
"O",
"O"
],
"tokens": [
"Thus",
",",
"inhibition",
"of",
"metalloproteases",
"by",
"TIMPs",
"inhibits",
"the",
"access",
"and",
"attachment",
"of",
"bacteria",
"to",
"the",
"Caco-2",
"cells",
"."
]
}
] |
PMC11672617
|
The biological activity of the synthesized compounds was evaluated using four cell lines: Jurkat, K562, A549, and HEK293.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"The",
"biological",
"activity",
"of",
"the",
"synthesized",
"compounds",
"was",
"evaluated",
"using",
"four",
"cell",
"lines",
":",
"Jurkat",
",",
"K562",
",",
"A549",
",",
"and",
"HEK293",
"."
]
}
] |
PMC11621493
|
After the incubation, cells were washed two times with 1 ml PBS, and cellular lipids were extracted directly from the 6-well plates using 1 ml hexane/isopropanol (v/v, 3:2) for 10 min, followed by 0.5 ml hexane/isopropanol (v/v, 3:2) for 5 min and 0.5 ml 100% isopropanol for 5 min.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"After",
"the",
"incubation",
",",
"cells",
"were",
"washed",
"two",
"times",
"with",
"1",
"ml",
"PBS",
",",
"and",
"cellular",
"lipids",
"were",
"extracted",
"directly",
"from",
"the",
"6-well",
"plates",
"using",
"1",
"ml",
"hexane/isopropanol",
"(",
"v/v",
",",
"3:2",
")",
"for",
"10",
"min",
",",
"followed",
"by",
"0.5",
"ml",
"hexane/isopropanol",
"(",
"v/v",
",",
"3:2",
")",
"for",
"5",
"min",
"and",
"0.5",
"ml",
"100",
"%",
"isopropanol",
"for",
"5",
"min",
"."
]
}
] |
PMC7185206
|
Additional flow diagrams in Supplemental Figure 8.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Additional",
"flow",
"diagrams",
"in",
"Supplemental",
"Figure",
"8",
"."
]
}
] |
PMC7185206
|
To determine whether PD-L1 protein levels are commensurate with CD274 (PD-L1) mRNA expression in human tumors, we queried The Cancer Genome Atlas (TCGA) for normalized reverse phase protein array (RPPA) PD-L1 protein levels and for normalized CD274 RNA-seq transcript sequences per million mapped fragments (FPKM) and calculated a PD-L1 protein-to-mRNA ratio for each sample.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"To",
"determine",
"whether",
"PD-L1",
"protein",
"levels",
"are",
"commensurate",
"with",
"CD274",
"(",
"PD-L1",
")",
"mRNA",
"expression",
"in",
"human",
"tumors",
",",
"we",
"queried",
"The",
"Cancer",
"Genome",
"Atlas",
"(",
"TCGA",
")",
"for",
"normalized",
"reverse",
"phase",
"protein",
"array",
"(",
"RPPA",
")",
"PD-L1",
"protein",
"levels",
"and",
"for",
"normalized",
"CD274",
"RNA-seq",
"transcript",
"sequences",
"per",
"million",
"mapped",
"fragments",
"(",
"FPKM",
")",
"and",
"calculated",
"a",
"PD-L1",
"protein-to-mRNA",
"ratio",
"for",
"each",
"sample",
"."
]
}
] |
PMC9429973
|
Summary/Conclusion: Esomeprazole 40mg twice daily resulted in a significant reduction in liver iron content when compared to placebo in a heterogeneous group of patients with non-transfusion-dependent hereditary anemias with mild-to-moderate iron overload.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Summary/Conclusion",
":",
"Esomeprazole",
"40",
"mg",
"twice",
"daily",
"resulted",
"in",
"a",
"significant",
"reduction",
"in",
"liver",
"iron",
"content",
"when",
"compared",
"to",
"placebo",
"in",
"a",
"heterogeneous",
"group",
"of",
"patients",
"with",
"non-transfusion-dependent",
"hereditary",
"anemias",
"with",
"mild-to-moderate",
"iron",
"overload",
"."
]
}
] |
PMC11345828
|
Incubation of sample and beads was performed as suggested at 4 °C overnight (16 h) in the dark, incubation with Biotinylated Detection Antibody was performed for 1 h at room temperature with shaking in the dark.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Incubation",
"of",
"sample",
"and",
"beads",
"was",
"performed",
"as",
"suggested",
"at",
"4",
"°",
"C",
"overnight",
"(",
"16",
"h",
")",
"in",
"the",
"dark",
",",
"incubation",
"with",
"Biotinylated",
"Detection",
"Antibody",
"was",
"performed",
"for",
"1",
"h",
"at",
"room",
"temperature",
"with",
"shaking",
"in",
"the",
"dark",
"."
]
}
] |
PMC11348300
|
To better account for tumor heterogeneity, larger tumors were divided into sections before imaging, and the resulting signals were averaged during analysis.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"To",
"better",
"account",
"for",
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",",
"larger",
"tumors",
"were",
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"before",
"imaging",
",",
"and",
"the",
"resulting",
"signals",
"were",
"averaged",
"during",
"analysis",
"."
]
}
] |
PMC11627060
|
This reduction in surface charge may be attributed to alterations in the secondary structure of the NPs, leading to decreased surface charges during NP assembly.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"surface",
"charges",
"during",
"NP",
"assembly",
"."
]
}
] |
PMC6684588
|
Plasmids were stably transfected in Chinese hamster ovary (CHO) DUKX cells and used to express ACE-083 (FST291-Fc) and FST315-Fc.
|
[
{
"tags": [
"O",
"O",
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"O",
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"I-CellLine",
"I-CellLine",
"O",
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"O",
"B-CellLine",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"tokens": [
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"ACE-083",
"(",
"FST291-Fc",
")",
"and",
"FST315-Fc",
"."
]
}
] |
PMC11594588
|
G protein-coupled receptors (GPCRs) are the most numerous and highly diverse group of membrane proteins responsible for transmitting and mediating external signals and stimuli across the lipid bilayer to effector sites located within the cell .
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
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"protein-coupled",
"receptors",
"(",
"GPCRs",
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"are",
"the",
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"diverse",
"group",
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"and",
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"external",
"signals",
"and",
"stimuli",
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"the",
"lipid",
"bilayer",
"to",
"effector",
"sites",
"located",
"within",
"the",
"cell",
"."
]
}
] |
PMC11746948
|
The samples were then subjected to methanol-chloroform-H2O precipitation, as described above, and resuspended in 30 µL lysis buffer, warmed to 37 °C for 10 min, and briefly (∼5 s) sonicated and treated with 90 µL lysis buffer with 0.2% Triton X-100 and 1.33 mM mPEG-Mal (5 kDa; Sigma) for a final concentration of 1 mM mPEG-Mal.
|
[
{
"tags": [
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
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"O",
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"O",
"O",
"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
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"O",
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"O",
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"concentration",
"of",
"1",
"mM",
"mPEG-Mal",
"."
]
}
] |
PMC11723947
|
Unless otherwise stated, Th1 culture medium also contained 10 ng/mL rmIL-12 (R&D Systems) and 10 μg/mL anti-IL-4 antibody (11B11, BioXcell), and Th17 culture medium contained 10 ng/mL rmIL-1β (R&D Systems), 20 ng/mL rmIL-6 (R&D Sytems), 1 ng/mL rhTGF-β 1 and 10 μg/mL anti-IL-4 and anti-IFN-γ (XMG1.2, BioXcell) antibodies.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"20",
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"rmIL-6",
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"R&D",
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"and",
"anti-IFN-γ",
"(",
"XMG1.2",
",",
"BioXcell",
")",
"antibodies",
"."
]
}
] |
PMC10850553
|
The tag count of C5AR1 from acquired data sets is shown.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"The",
"tag",
"count",
"of",
"C5AR1",
"from",
"acquired",
"data",
"sets",
"is",
"shown",
"."
]
}
] |
PMC11750712
|
In phase 1 dose escalation, four dose levels were explored: cohort 1 (n = 3 patients) received 25 × 10 AUTO4 T cells; cohort 2 (n = 2 patients) received 75 × 10 AUTO4 T cells; cohort 3 (n = 1 patient) received 225 × 10 AUTO4 T cells; and cohort 4 (n = 4 patients) received 450 × 10 AUTO4 T cells.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"In",
"phase",
"1",
"dose",
"escalation",
",",
"four",
"dose",
"levels",
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"cohort",
"1",
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"n",
"=",
"3",
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"received",
"25",
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"AUTO4",
"T",
"cells",
";",
"cohort",
"2",
"(",
"n",
"=",
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"patients",
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"received",
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"AUTO4",
"T",
"cells",
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"cohort",
"3",
"(",
"n",
"=",
"1",
"patient",
")",
"received",
"225",
"×",
"10",
"AUTO4",
"T",
"cells",
";",
"and",
"cohort",
"4",
"(",
"n",
"=",
"4",
"patients",
")",
"received",
"450",
"×",
"10",
"AUTO4",
"T",
"cells",
"."
]
}
] |
PMC9261184
|
However, methane emissions over this voyage were 60% higher than those assumed by Roman-White et al., which can be attributed to the difference in the assumed methane slip.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"However",
",",
"methane",
"emissions",
"over",
"this",
"voyage",
"were",
"60",
"%",
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"assumed",
"by",
"Roman-White",
"et",
"al.",
",",
"which",
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"attributed",
"to",
"the",
"difference",
"in",
"the",
"assumed",
"methane",
"slip",
"."
]
}
] |
PMC10440586
|
Only 30% of patients with gliomas survive at five years after diagnosis, and this number drops to 6.8% for glioblastoma (GBM) .
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Only",
"30",
"%",
"of",
"patients",
"with",
"gliomas",
"survive",
"at",
"five",
"years",
"after",
"diagnosis",
",",
"and",
"this",
"number",
"drops",
"to",
"6.8",
"%",
"for",
"glioblastoma",
"(",
"GBM",
")",
"."
]
}
] |
PMC11525028
|
Scale bars: 50 μm (left), 25 μm (right).Data are presented as the mean ± SD.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Scale",
"bars",
":",
"50",
"μm",
"(",
"left",
")",
",",
"25",
"μm",
"(right).Data",
"are",
"presented",
"as",
"the",
"mean",
"±",
"SD",
"."
]
}
] |
PMC9105697
|
In 1 of the 2 patients with primary tumors, and 5 of the 13 samples with metastatic disease, breakpoint ctDNA was identified (Figure 2A).
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"In",
"1",
"of",
"the",
"2",
"patients",
"with",
"primary",
"tumors",
",",
"and",
"5",
"of",
"the",
"13",
"samples",
"with",
"metastatic",
"disease",
",",
"breakpoint",
"ctDNA",
"was",
"identified",
"(",
"Figure",
"2A",
")",
"."
]
}
] |
PMC11721587
|
However, unlike CC-Fu, CC-Fu could still phosphorylate its own activation loop as determined by the phospho-specific antibody pT158/S159 (fig. S1G) (26), as well as the coexpressed Cos2 and Sufu as indicated by their mobility shift (fig. S1H), suggesting that CC-Fu is catalytically active.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
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",",
"unlike",
"CC-Fu",
",",
"CC-Fu",
"could",
"still",
"phosphorylate",
"its",
"own",
"activation",
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"as",
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"by",
"the",
"phospho-specific",
"antibody",
"pT158/S159",
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"fig.",
"S1",
"G",
")",
"(",
"26",
")",
",",
"as",
"well",
"as",
"the",
"coexpressed",
"Cos2",
"and",
"Sufu",
"as",
"indicated",
"by",
"their",
"mobility",
"shift",
"(",
"fig.",
"S1H",
")",
",",
"suggesting",
"that",
"CC-Fu",
"is",
"catalytically",
"active",
"."
]
}
] |
PMC9429973
|
2018;17:1973).
|
[
{
"tags": [
"O",
"O",
"O"
],
"tokens": [
"2018;17:1973",
")",
"."
]
}
] |
PMC5363531
|
Single and combined treatments were performed for 72 hours, sequential administrations at 72 (dasatinib pretreatment) + 72 hours (PEM incubation).
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Single",
"and",
"combined",
"treatments",
"were",
"performed",
"for",
"72",
"hours",
",",
"sequential",
"administrations",
"at",
"72",
"(",
"dasatinib",
"pretreatment",
")",
"+",
"72",
"hours",
"(",
"PEM",
"incubation",
")",
"."
]
}
] |
PMC9512971
|
The length of the double-blind period (up to 14 days) was chosen because of the typical clinical course .
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"The",
"length",
"of",
"the",
"double-blind",
"period",
"(",
"up",
"to",
"14",
"days",
")",
"was",
"chosen",
"because",
"of",
"the",
"typical",
"clinical",
"course",
"."
]
}
] |
PMC9429973
|
Results: A total of 215 patients were recruited.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Results",
":",
"A",
"total",
"of",
"215",
"patients",
"were",
"recruited",
"."
]
}
] |
PMC10719213
|
The effect of cladribine on cell proliferation in Jurkat with 12 days (n = 5) and 16 days in culture (n = 5). (
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"B-CellLine",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"The",
"effect",
"of",
"cladribine",
"on",
"cell",
"proliferation",
"in",
"Jurkat",
"with",
"12",
"days",
"(",
"n",
"=",
"5",
")",
"and",
"16",
"days",
"in",
"culture",
"(",
"n",
"=",
"5",
")",
".",
"("
]
}
] |
PMC11661040
|
Osteosarcoma, the most common primary bone malignancy, is a type of tumor originating from undifferentiated bone fibrous tissue, usually occurring in the distal femur and proximal tibia(Ritter et al. 2010).
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Osteosarcoma",
",",
"the",
"most",
"common",
"primary",
"bone",
"malignancy",
",",
"is",
"a",
"type",
"of",
"tumor",
"originating",
"from",
"undifferentiated",
"bone",
"fibrous",
"tissue",
",",
"usually",
"occurring",
"in",
"the",
"distal",
"femur",
"and",
"proximal",
"tibia(Ritter",
"et",
"al.",
"2010",
")",
"."
]
}
] |
PMC11755519
|
The cargo they carry, such as RNA, DNA, proteins, metabolites, or lipids can affect the properties of target cells.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"The",
"cargo",
"they",
"carry",
",",
"such",
"as",
"RNA",
",",
"DNA",
",",
"proteins",
",",
"metabolites",
",",
"or",
"lipids",
"can",
"affect",
"the",
"properties",
"of",
"target",
"cells",
"."
]
}
] |
PMC11747885
|
Compounds 41, 42, and 46 were excluded from this experiment because of their inherent cytotoxicity to HEK293 cells.
|
[
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"O",
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]
}
] |
PMC6114978
|
No angiosarcomas or chondrosarcomas were noted to exhibit loss of the Hippo kinases, but the sample sizes of these sarcomas were small.
|
[
{
"tags": [
"O",
"O",
"O",
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"O",
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"O",
"O",
"O",
"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
"O",
"O",
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"sample",
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"of",
"these",
"sarcomas",
"were",
"small",
"."
]
}
] |
PMC6024716
|
Additionally, the role of OAZ1 in polyamine metabolism has been well studied , making it a promising target to explore the connection between OAZ1 inhibition and the level of different polyamines.
|
[
{
"tags": [
"O",
"O",
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"O",
"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
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"between",
"OAZ1",
"inhibition",
"and",
"the",
"level",
"of",
"different",
"polyamines",
"."
]
}
] |
PMC9436459
|
The other seven type D-I MDAAs with the diene moiety at C-6 of A ring have trans–trans and cis–trans configurations, as exemplified by 98–99 and 100–104, respectively.
|
[
{
"tags": [
"O",
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"O",
"O",
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"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"98–99",
"and",
"100–104",
",",
"respectively",
"."
]
}
] |
PMC7171147
|
N = 2.
|
[
{
"tags": [
"O",
"O",
"O",
"O"
],
"tokens": [
"N",
"=",
"2",
"."
]
}
] |
PMC11703896
|
Using RMSF simulation analysis, rapamycin was found to be more stable in ALK, EGFR and MET than other receptors.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"rapamycin",
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"ALK",
",",
"EGFR",
"and",
"MET",
"than",
"other",
"receptors",
"."
]
}
] |
PMC11295144
|
To test whether the observed potentiation of NL2 effects by GABAARs may be a consequence of increased expression of NL2, we have transfected the HA-tagged NL2 cDNA into the control, α4β3δ-GABAAR- or α2β2γ2-GABAAR-expressing HEK293 cells and carried out ELISA using an HA tag-specific antibody (Supplementary Figure S3).
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"O",
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"tag-specific",
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"Supplementary",
"Figure",
"S3",
")",
"."
]
}
] |
PMC5311252
|
The oncomotif-miRNA signature was defined by selecting all genes with a false discovery rate<1.0 E-05 and an absolute log2 fold-change >1.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
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"oncomotif-miRNA",
"signature",
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"by",
"selecting",
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"rate<1.0",
"E-05",
"and",
"an",
"absolute",
"log2",
"fold-change",
">",
"1",
"."
]
}
] |
PMC11746942
|
p values are indicated for each comparison.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"p",
"values",
"are",
"indicated",
"for",
"each",
"comparison",
"."
]
}
] |
PMC9587866
|
These responses can effectively be dealt by using nanotechnological delivery methods to avert the side effects and further improve the effectiveness of the compounds (Patra et al., 2018).
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
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"can",
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"compounds",
"(",
"Patra",
"et",
"al.",
",",
"2018",
")",
"."
]
}
] |
PMC5839394
|
SKBR3 cells were plated in 96 well plates at a density of 5 × 10/well, allowed to growth overnight and incubated for 24 h with different AgNPs-EPSs concentrations.
|
[
{
"tags": [
"B-CellLine",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"SKBR3",
"cells",
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"overnight",
"and",
"incubated",
"for",
"24",
"h",
"with",
"different",
"AgNPs-EPSs",
"concentrations",
"."
]
}
] |
PMC11194678
|
On the other hand, although the RNA-binding-deficient STAU1 HKΔRBD4 mutant possessed the LLPS ability, its failure to recruit and enrich target RNA resulted in a negligible impact on mTOR signaling and autophagy pathway, suggesting that both the LLPS and RNA-binding properties of STAU1 are required for its function in regulating RNA translation.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
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"possessed",
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"ability",
",",
"its",
"failure",
"to",
"recruit",
"and",
"enrich",
"target",
"RNA",
"resulted",
"in",
"a",
"negligible",
"impact",
"on",
"mTOR",
"signaling",
"and",
"autophagy",
"pathway",
",",
"suggesting",
"that",
"both",
"the",
"LLPS",
"and",
"RNA-binding",
"properties",
"of",
"STAU1",
"are",
"required",
"for",
"its",
"function",
"in",
"regulating",
"RNA",
"translation",
"."
]
}
] |
PMC5034105
|
Moreover, vector-free JEV transmission due to persistence of virus in tonsils and virus shedding in oronasal secretions of pigs has recently been reported.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Moreover",
",",
"vector-free",
"JEV",
"transmission",
"due",
"to",
"persistence",
"of",
"virus",
"in",
"tonsils",
"and",
"virus",
"shedding",
"in",
"oronasal",
"secretions",
"of",
"pigs",
"has",
"recently",
"been",
"reported",
"."
]
}
] |
PMC11635087
|
Notably, many algal cells become inactive at temperatures below 37℃, which is the optimal temperature for cultured mammalian cells, but schyzon cells remain active at this temperature, making it useful for synthetic biology research.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
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"algal",
"cells",
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"cells",
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"active",
"at",
"this",
"temperature",
",",
"making",
"it",
"useful",
"for",
"synthetic",
"biology",
"research",
"."
]
}
] |
PMC10976516
|
Lung cancer therapy relies on the tumor stage at the time of diagnosis (Table 1, types of treatment for various stages).
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Lung",
"cancer",
"therapy",
"relies",
"on",
"the",
"tumor",
"stage",
"at",
"the",
"time",
"of",
"diagnosis",
"(",
"Table",
"1",
",",
"types",
"of",
"treatment",
"for",
"various",
"stages",
")",
"."
]
}
] |
PMC9964635
|
The protein c-kit tyrosine kinase is expected to interact strongly with cancer-targeted therapeutics.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"The",
"protein",
"c-kit",
"tyrosine",
"kinase",
"is",
"expected",
"to",
"interact",
"strongly",
"with",
"cancer-targeted",
"therapeutics",
"."
]
}
] |
PMC11767793
|
Polyethyleneimine (PEI), also a polycation, is highly water soluble and is routinely used in gene transfection/delivery applications .
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Polyethyleneimine",
"(",
"PEI",
")",
",",
"also",
"a",
"polycation",
",",
"is",
"highly",
"water",
"soluble",
"and",
"is",
"routinely",
"used",
"in",
"gene",
"transfection/delivery",
"applications",
"."
]
}
] |
PMC7723249
|
No difference in IL-8 production between CCHFV- and HAZV-infection was observed.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"No",
"difference",
"in",
"IL-8",
"production",
"between",
"CCHFV-",
"and",
"HAZV-infection",
"was",
"observed",
"."
]
}
] |
PMC10993311
|
T2 = 20-26 weeks.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"T2",
"=",
"20",
"-",
"26",
"weeks",
"."
]
}
] |
PMC2118063
|
PE–Cy7 and A647-conjugated isotype-matched mAbs were used as controls.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"PE",
"–",
"Cy7",
"and",
"A647-conjugated",
"isotype-matched",
"mAbs",
"were",
"used",
"as",
"controls",
"."
]
}
] |
PMC10926885
|
By bypassing immunological checkpoints, which activate immune cells and cause them to attack cancer cells, several immunotherapy treatments for cancer are made possible.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"By",
"bypassing",
"immunological",
"checkpoints",
",",
"which",
"activate",
"immune",
"cells",
"and",
"cause",
"them",
"to",
"attack",
"cancer",
"cells",
",",
"several",
"immunotherapy",
"treatments",
"for",
"cancer",
"are",
"made",
"possible",
"."
]
}
] |
PMC11754784
|
Cancer cells were stained with CellTrace™ Far Red dye and M1 macrophages were stained with CellTrace™ CFSE for optical differentiation.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Cancer",
"cells",
"were",
"stained",
"with",
"CellTrace",
"™",
"Far",
"Red",
"dye",
"and",
"M1",
"macrophages",
"were",
"stained",
"with",
"CellTrace",
"™",
"CFSE",
"for",
"optical",
"differentiation",
"."
]
}
] |
PMC3035438
|
These results indicate that the purified chimeric IgG is highly specific to the target antigen but exhibits less reactivity in the initial culture supernatants due to interference by the excess of coexisting chicken IgM. Figure 3.Selection of antigen-specific chimeric IgG. (A) Primary screen of anti-apoferritin mAbs selected with the ADLib system from the chimera CX13 derived library.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
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"results",
"indicate",
"that",
"the",
"purified",
"chimeric",
"IgG",
"is",
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"to",
"the",
"target",
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"but",
"exhibits",
"less",
"reactivity",
"in",
"the",
"initial",
"culture",
"supernatants",
"due",
"to",
"interference",
"by",
"the",
"excess",
"of",
"coexisting",
"chicken",
"IgM.",
"Figure",
"3.Selection",
"of",
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"chimeric",
"IgG.",
"(",
"A",
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"Primary",
"screen",
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"selected",
"with",
"the",
"ADLib",
"system",
"from",
"the",
"chimera",
"CX13",
"derived",
"library",
"."
]
}
] |
PMC11267830
|
Moreover, detailed histological analyses of liver and spleen samples confirmed reduced infiltration of RBM39-suppressed J.gamma1 cells in these organs (Fig. 5h).
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Moreover",
",",
"detailed",
"histological",
"analyses",
"of",
"liver",
"and",
"spleen",
"samples",
"confirmed",
"reduced",
"infiltration",
"of",
"RBM39-suppressed",
"J.gamma1",
"cells",
"in",
"these",
"organs",
"(",
"Fig.",
"5h",
")",
"."
]
}
] |
PMC11670407
|
However, the role of OTULIN in OS, especially in chemotherapy-resistant OS, has not been well investigated.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"However",
",",
"the",
"role",
"of",
"OTULIN",
"in",
"OS",
",",
"especially",
"in",
"chemotherapy-resistant",
"OS",
",",
"has",
"not",
"been",
"well",
"investigated",
"."
]
}
] |
PMC10142392
|
Accumulation at tumor sites depends on the camouflage, stability, blood circulation/retention, targeting ability of the nanoparticles, and other factors such as vascularization and angiogenesis .
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Accumulation",
"at",
"tumor",
"sites",
"depends",
"on",
"the",
"camouflage",
",",
"stability",
",",
"blood",
"circulation/retention",
",",
"targeting",
"ability",
"of",
"the",
"nanoparticles",
",",
"and",
"other",
"factors",
"such",
"as",
"vascularization",
"and",
"angiogenesis",
"."
]
}
] |
PMC8270637
|
Western blot was used to detect the expression of total NFATc1 protein and phosphorylated NFATc1 protein in T cells. (
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Western",
"blot",
"was",
"used",
"to",
"detect",
"the",
"expression",
"of",
"total",
"NFATc1",
"protein",
"and",
"phosphorylated",
"NFATc1",
"protein",
"in",
"T",
"cells",
".",
"("
]
}
] |
PMC11705067
|
Next, focusing on the functional analysis of the differentially expressed genes that are positively and negatively associated with both FDX1 and DLAT genes in ccRCC.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Next",
",",
"focusing",
"on",
"the",
"functional",
"analysis",
"of",
"the",
"differentially",
"expressed",
"genes",
"that",
"are",
"positively",
"and",
"negatively",
"associated",
"with",
"both",
"FDX1",
"and",
"DLAT",
"genes",
"in",
"ccRCC",
"."
]
}
] |
PMC11001582
|
n (independent biological replicates, one eye counted per fly) = 15 WT/+, 15 WT/Mp RNAi, 12 GR36/+, 10 GR36/Mp RNAi; two-way ANOVA, Bonferroni’s multiple comparison.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"n",
"(",
"independent",
"biological",
"replicates",
",",
"one",
"eye",
"counted",
"per",
"fly",
")",
"=",
"15",
"WT/+",
",",
"15",
"WT/Mp",
"RNAi",
",",
"12",
"GR36/+",
",",
"10",
"GR36/Mp",
"RNAi",
";",
"two-way",
"ANOVA",
",",
"Bonferroni",
"’s",
"multiple",
"comparison",
"."
]
}
] |
PMC3164356
|
Chromosomes were diluted and loaded onto the microfluidic chip so that around half of the 48 chambers were occupied by single chromosomes.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Chromosomes",
"were",
"diluted",
"and",
"loaded",
"onto",
"the",
"microfluidic",
"chip",
"so",
"that",
"around",
"half",
"of",
"the",
"48",
"chambers",
"were",
"occupied",
"by",
"single",
"chromosomes",
"."
]
}
] |
PMC11349530
|
Kynurenine has been demonstrated to promote the expression of the protective TGF-β, the differentiation of Treg cells, and the induction of IDO1 expression in dendritic cells (DCs) (89–91).
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Kynurenine",
"has",
"been",
"demonstrated",
"to",
"promote",
"the",
"expression",
"of",
"the",
"protective",
"TGF-β",
",",
"the",
"differentiation",
"of",
"Treg",
"cells",
",",
"and",
"the",
"induction",
"of",
"IDO1",
"expression",
"in",
"dendritic",
"cells",
"(",
"DCs",
")",
"(",
"89–91",
")",
"."
]
}
] |
PMC4360730
|
Terms from PRO can be used to annotate biosample treatments that use protein reagents.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Terms",
"from",
"PRO",
"can",
"be",
"used",
"to",
"annotate",
"biosample",
"treatments",
"that",
"use",
"protein",
"reagents",
"."
]
}
] |
PMC7762347
|
Despite the fact that humans and animals are in their everyday life exposed to complex cyanobacterial mixtures, the studies describing the combined effects of these toxins are scarce.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Despite",
"the",
"fact",
"that",
"humans",
"and",
"animals",
"are",
"in",
"their",
"everyday",
"life",
"exposed",
"to",
"complex",
"cyanobacterial",
"mixtures",
",",
"the",
"studies",
"describing",
"the",
"combined",
"effects",
"of",
"these",
"toxins",
"are",
"scarce",
"."
]
}
] |
PMC11673128
|
Cell suspension of 500.000 AS4 cells, previously exposed to ALKi, and 250.000 macrophages were co-cultured with anti-CD47 mAb at a concentration of 10 μg/mL and incubated in a serum-free IMDM within a 4-well Nunc™ Lab-Tek™ II Chamber Slide™ System (Thermofisher) for 1–2 hours, in a humidified 5% CO2 incubator at 37 °C.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"B-CellLine",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Cell",
"suspension",
"of",
"500.000",
"AS4",
"cells",
",",
"previously",
"exposed",
"to",
"ALKi",
",",
"and",
"250.000",
"macrophages",
"were",
"co-cultured",
"with",
"anti-CD47",
"mAb",
"at",
"a",
"concentration",
"of",
"10",
"μg/mL",
"and",
"incubated",
"in",
"a",
"serum-free",
"IMDM",
"within",
"a",
"4-well",
"Nunc",
"™",
"Lab-Tek",
"™",
"II",
"Chamber",
"Slide",
"™",
"System",
"(",
"Thermofisher",
")",
"for",
"1–2",
"hours",
",",
"in",
"a",
"humidified",
"5",
"%",
"CO2",
"incubator",
"at",
"37",
"°",
"C",
"."
]
}
] |
PMC11285179
|
Scale bar = 100 μm.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Scale",
"bar",
"=",
"100",
"μm",
"."
]
}
] |
PMC9429973
|
Methods: 32 blood samples were collected from 15 ERCC6L2 patients (some in multiple time points), and 6 healthy controls.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Methods",
":",
"32",
"blood",
"samples",
"were",
"collected",
"from",
"15",
"ERCC6L2",
"patients",
"(",
"some",
"in",
"multiple",
"time",
"points",
")",
",",
"and",
"6",
"healthy",
"controls",
"."
]
}
] |
PMC10154881
|
Mice were implanted subcutaneously with B16F10N4 melanoma and intratumorally treated saline (MOCK) or rMV‐SLAMblind (rMV) at day 4, day 5, day 6, day 8, and day 10.
|
[
{
"tags": [
"O",
"O",
"O",
"O",
"O",
"B-CellLine",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O",
"O"
],
"tokens": [
"Mice",
"were",
"implanted",
"subcutaneously",
"with",
"B16F10N4",
"melanoma",
"and",
"intratumorally",
"treated",
"saline",
"(",
"MOCK",
")",
"or",
"rMV‐SLAMblind",
"(",
"rMV",
")",
"at",
"day",
"4",
",",
"day",
"5",
",",
"day",
"6",
",",
"day",
"8",
",",
"and",
"day",
"10",
"."
]
}
] |
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