| ## File description for: Mesculenta_305_v6_PROseq_ISM_LOG2FC.txt.gz | |
| ## Intergenic enhancer regions based on Lozano et al. 2021 (https://pubmed.ncbi.nlm.nih.gov/34499719/) | |
| ## Genome version: Manihot esculenta reference genome v6.1 from Phytozome | |
| ## CHR: Chromosome | |
| ## POS: Physical position (bp) | |
| ## REF: Reference allele | |
| ## ALT: Alternative allele | |
| ## LOG2FC: Log fold change in Intergenic enhancer probability (log2(p_mutated_sequence / p_original_sequence)) | |
| ## File description for: Mesculenta_v6_GeneExpression_ISM_LOG2FC.txt.gz | |
| ## Gene expression prediction based on: Wilson et al. 2016 (https://pubmed.ncbi.nlm.nih.gov/28116755/) | |
| ## Genome version: Manihot esculenta reference genome v6 from Ensembl 56 | |
| ## CHR: Chromosome | |
| ## POS: Physical position (bp) | |
| ## REF: Reference allele | |
| ## ALT: Alternative allele | |
| ## GENE: Gene ID | |
| ## STRAND: Gene strand | |
| ## TISSUE: Tissue type (Acronyms detailed in Figure 1 of Wilson et al.) | |
| ## LOG2FC: Gene expression log fold change (log2(gene_exp_mutated_sequence / gene_exp_original_sequence)) |