Datasets:
Dr. Jorge Abreu Vicente
commited on
Commit
•
1320a6a
1
Parent(s):
43ccb0d
BC5CDR-chem-IOB is working
Browse files
BLURB.py
CHANGED
@@ -100,7 +100,7 @@ class Blurb(datasets.GeneratorBasedBuilder):
|
|
100 |
|
101 |
BUILDER_CONFIGS = [
|
102 |
BlurbConfig(name='BC5CDR-chem-IOB', task='ner', label_classes=['O', 'B-Chemical', 'I-Chemical'],
|
103 |
-
data_url = "https://github.com/cambridgeltl/MTL-Bioinformatics-2016/
|
104 |
description='BC5-CHEM',
|
105 |
citation=CITATION_BC5_CHEM)
|
106 |
]
|
@@ -143,8 +143,7 @@ class Blurb(datasets.GeneratorBasedBuilder):
|
|
143 |
logger.info("⏳ Generating examples from = %s", filepath)
|
144 |
|
145 |
if self.config.task == 'ner':
|
146 |
-
|
147 |
-
|
148 |
|
149 |
def _ner_split_generator(self, downloaded_files):
|
150 |
return [
|
@@ -156,7 +155,6 @@ class Blurb(datasets.GeneratorBasedBuilder):
|
|
156 |
gen_kwargs={"filepath": downloaded_files["test"]}),
|
157 |
]
|
158 |
|
159 |
-
|
160 |
def _ner_example_generator(self, filepath):
|
161 |
with open(filepath, encoding="utf-8") as f:
|
162 |
guid = 0
|
|
|
100 |
|
101 |
BUILDER_CONFIGS = [
|
102 |
BlurbConfig(name='BC5CDR-chem-IOB', task='ner', label_classes=['O', 'B-Chemical', 'I-Chemical'],
|
103 |
+
data_url = "https://github.com/cambridgeltl/MTL-Bioinformatics-2016/raw/master/data/",
|
104 |
description='BC5-CHEM',
|
105 |
citation=CITATION_BC5_CHEM)
|
106 |
]
|
|
|
143 |
logger.info("⏳ Generating examples from = %s", filepath)
|
144 |
|
145 |
if self.config.task == 'ner':
|
146 |
+
return self._ner_example_generator(filepath)
|
|
|
147 |
|
148 |
def _ner_split_generator(self, downloaded_files):
|
149 |
return [
|
|
|
155 |
gen_kwargs={"filepath": downloaded_files["test"]}),
|
156 |
]
|
157 |
|
|
|
158 |
def _ner_example_generator(self, filepath):
|
159 |
with open(filepath, encoding="utf-8") as f:
|
160 |
guid = 0
|