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ctheodoris
/
Geneformer
like
171
Fill-Mask
Transformers
PyTorch
Safetensors
ctheodoris/Genecorpus-30M
bert
Inference Endpoints
License:
apache-2.0
Model card
Files
Files and versions
Community
374
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b07f4b1
Geneformer
/
geneformer
13 contributors
History:
95 commits
ctheodoris
save pval
b07f4b1
16 days ago
__init__.py
899 Bytes
move dicts to init
18 days ago
classifier.py
60.7 kB
move dicts to init
18 days ago
classifier_utils.py
16.7 kB
save pval
16 days ago
collator_for_classification.py
29.9 kB
move dicts to init
18 days ago
emb_extractor.py
31.5 kB
move dicts to init
18 days ago
evaluation_utils.py
9.75 kB
move dicts to init
18 days ago
gene_median_dictionary.pkl
pickle
Detected Pickle imports (2)
"numpy.dtype"
,
"numpy.core.multiarray.scalar"
How to fix it?
941 kB
Add Geneformer tokenizer and updated model card
almost 2 years ago
gene_name_id_dict.pkl
pickle
1.12 MB
LFS
Upload gene_name_id_dict.pkl (#14)
about 1 year ago
in_silico_perturber.py
39.2 kB
add typing list import
16 days ago
in_silico_perturber_stats.py
44.1 kB
move dicts to init
18 days ago
perturber_utils.py
26.8 kB
move dicts to init
18 days ago
pretrainer.py
37.1 kB
move dicts to init
18 days ago
token_dictionary.pkl
pickle
Detected Pickle imports (2)
"numpy.dtype"
,
"numpy.core.multiarray.scalar"
How to fix it?
788 kB
Update token_dictionary.pkl
over 1 year ago
tokenizer.py
16.4 kB
move dicts to init
18 days ago