Geneformer / examples /extract_and_plot_cell_embeddings.ipynb

Commit History

Add option to output embs as tensor
624349c

Christina Theodoris commited on

Fixed error with perturbing individual genes and updated ways to specify cell_states_to_model (#146)
9169bfd

ctheodoris davidjwen commited on

Rename heatmap legend to be correct label
badcca6

Christina Theodoris commited on

Add function to extract and plot cell embeddings
d154fee

Christina Theodoris commited on