metadata

base_model: dmis-lab/biobert-v1.1
tags:
  - generated_from_trainer
datasets:
  - conll2002
metrics:
  - precision
  - recall
  - f1
  - accuracy
model-index:
  - name: biobert-base-case-ner
    results:
      - task:
          name: Token Classification
          type: token-classification
        dataset:
          name: conll2002
          type: conll2002
          config: es
          split: validation
          args: es
        metrics:
          - name: Precision
            type: precision
            value: 0.7494539100043687
          - name: Recall
            type: recall
            value: 0.7883731617647058
          - name: F1
            type: f1
            value: 0.7684210526315789
          - name: Accuracy
            type: accuracy
            value: 0.9629927984937011

biobert-base-case-ner

This model is a fine-tuned version of dmis-lab/biobert-v1.1 on the conll2002 dataset. It achieves the following results on the evaluation set:

Loss: 0.2531
Precision: 0.7495
Recall: 0.7884
F1: 0.7684
Accuracy: 0.9630

Model description

More information needed

Intended uses & limitations

More information needed

Training and evaluation data

More information needed

Training procedure

Training hyperparameters

The following hyperparameters were used during training:

learning_rate: 2e-05
train_batch_size: 8
eval_batch_size: 8
seed: 42
optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
lr_scheduler_type: linear
num_epochs: 10

Training results

Training Loss	Epoch	Step	Validation Loss	Precision	Recall	F1	Accuracy
0.1214	1.0	1041	0.1681	0.6611	0.6997	0.6798	0.9523
0.0814	2.0	2082	0.1652	0.6692	0.7270	0.6969	0.9540
0.0531	3.0	3123	0.1628	0.7291	0.7682	0.7481	0.9624
0.0357	4.0	4164	0.1799	0.7427	0.7721	0.7571	0.9620
0.0277	5.0	5205	0.1963	0.7530	0.7824	0.7674	0.9627
0.0168	6.0	6246	0.2115	0.7333	0.7771	0.7546	0.9615
0.0136	7.0	7287	0.2311	0.7376	0.7769	0.7567	0.9613
0.0106	8.0	8328	0.2450	0.7552	0.7861	0.7703	0.9626
0.0062	9.0	9369	0.2572	0.7589	0.7877	0.7730	0.9622
0.0061	10.0	10410	0.2531	0.7495	0.7884	0.7684	0.9630

Framework versions

Transformers 4.41.1
Pytorch 2.3.0+cu121
Datasets 2.19.2
Tokenizers 0.19.1