Bohdan Ivashchenko commited on
Commit
92e007d
1 Parent(s): 063933c

delete non inference artifacts

Browse files
latest DELETED
@@ -1 +0,0 @@
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- global_step680
 
 
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zero_to_fp32.py DELETED
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1
- #!/usr/bin/env python
2
- '''Copyright The Microsoft DeepSpeed Team'''
3
-
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- # This script extracts fp32 consolidated weights from a zero 2 and 3 DeepSpeed checkpoints. It gets
5
- # copied into the top level checkpoint dir, so the user can easily do the conversion at any point in
6
- # the future. Once extracted, the weights don't require DeepSpeed and can be used in any
7
- # application.
8
- #
9
- # example: python zero_to_fp32.py . pytorch_model.bin
10
-
11
- import argparse
12
- import torch
13
- import glob
14
- import math
15
- import os
16
- import re
17
- from collections import OrderedDict
18
-
19
- # while this script doesn't use deepspeed to recover data, since the checkpoints are pickled with
20
- # DeepSpeed data structures it has to be available in the current python environment.
21
- from deepspeed.utils import logger
22
- from deepspeed.checkpoint.constants import (DS_VERSION,
23
- OPTIMIZER_STATE_DICT,
24
- SINGLE_PARTITION_OF_FP32_GROUPS,
25
- FP32_FLAT_GROUPS,
26
- ZERO_STAGE,
27
- PARTITION_COUNT,
28
- PARAM_SHAPES,
29
- BUFFER_NAMES)
30
-
31
- debug = 0
32
-
33
- # load to cpu
34
- device = torch.device('cpu')
35
-
36
-
37
- def atoi(text):
38
- return int(text) if text.isdigit() else text
39
-
40
-
41
- def natural_keys(text):
42
- '''
43
- alist.sort(key=natural_keys) sorts in human order
44
- http://nedbatchelder.com/blog/200712/human_sorting.html
45
- (See Toothy's implementation in the comments)
46
- '''
47
- return [atoi(c) for c in re.split(r'(\d+)', text)]
48
-
49
-
50
- def get_model_state_file(checkpoint_dir, zero_stage):
51
- if not os.path.isdir(checkpoint_dir):
52
- raise FileNotFoundError(f"Directory '{checkpoint_dir}' doesn't exist")
53
-
54
- # there should be only one file
55
- if zero_stage == 2:
56
- file = os.path.join(checkpoint_dir, "mp_rank_00_model_states.pt")
57
- elif zero_stage == 3:
58
- file = os.path.join(checkpoint_dir, "zero_pp_rank_0_mp_rank_00_model_states.pt")
59
-
60
- if not os.path.exists(file):
61
- raise FileNotFoundError(f"can't find model states file at '{file}'")
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-
63
- return file
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-
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-
66
- def get_optim_files(checkpoint_dir):
67
- # XXX: need to test that this simple glob rule works for multi-node setup too
68
- optim_files = sorted(glob.glob(os.path.join(checkpoint_dir,
69
- "*_optim_states.pt")),
70
- key=natural_keys)
71
-
72
- if len(optim_files) == 0:
73
- raise FileNotFoundError(
74
- f"can't find '*_optim_states.pt' files in directory '{checkpoint_dir}'")
75
-
76
- return optim_files
77
-
78
-
79
- def parse_model_state(file):
80
- state_dict = torch.load(file, map_location=device)
81
-
82
- if BUFFER_NAMES not in state_dict:
83
- raise ValueError(f"{file} is not a model state checkpoint")
84
- buffer_names = state_dict[BUFFER_NAMES]
85
- if debug:
86
- print("Found buffers:", buffer_names)
87
-
88
- # recover just the buffers while restoring them to fp32 if they were saved in fp16
89
- buffers = {
90
- k: v.float()
91
- for k,
92
- v in state_dict["module"].items() if k in buffer_names
93
- }
94
- param_shapes = state_dict[PARAM_SHAPES]
95
-
96
- ds_version = state_dict.get(DS_VERSION, None)
97
-
98
- return buffers, param_shapes, ds_version
99
-
100
-
101
- def parse_optim_states(files, ds_checkpoint_dir):
102
-
103
- total_files = len(files)
104
- state_dicts = []
105
- for f in files:
106
- state_dicts.append(torch.load(f, map_location=device))
107
-
108
- if not ZERO_STAGE in state_dicts[0][OPTIMIZER_STATE_DICT]:
109
- raise ValueError(f"{files[0]} is not a zero checkpoint")
110
- zero_stage = state_dicts[0][OPTIMIZER_STATE_DICT][ZERO_STAGE]
111
- world_size = state_dicts[0][OPTIMIZER_STATE_DICT][PARTITION_COUNT]
112
-
113
- # For ZeRO-2 each param group can have different partition_count as data parallelism for expert
114
- # parameters can be different from data parallelism for non-expert parameters. So we can just
115
- # use the max of the partition_count to get the dp world_size.
116
-
117
- if type(world_size) is list:
118
- world_size = max(world_size)
119
-
120
- if world_size != total_files:
121
- raise ValueError(
122
- f"Expected {world_size} of '*_optim_states.pt' under '{ds_checkpoint_dir}' but found {total_files} files. "
123
- "Possibly due to an overwrite of an old checkpoint, or a checkpoint didn't get saved by one or more processes."
124
- )
125
-
126
- # the groups are named differently in each stage
127
- if zero_stage == 2:
128
- fp32_groups_key = SINGLE_PARTITION_OF_FP32_GROUPS
129
- elif zero_stage == 3:
130
- fp32_groups_key = FP32_FLAT_GROUPS
131
- else:
132
- raise ValueError(f"unknown zero stage {zero_stage}")
133
-
134
- if zero_stage == 2:
135
- fp32_flat_groups = [
136
- state_dicts[i][OPTIMIZER_STATE_DICT][fp32_groups_key]
137
- for i in range(len(state_dicts))
138
- ]
139
- elif zero_stage == 3:
140
- # if there is more than one param group, there will be multiple flattened tensors - one
141
- # flattened tensor per group - for simplicity merge them into a single tensor
142
- #
143
- # XXX: could make the script more memory efficient for when there are multiple groups - it
144
- # will require matching the sub-lists of param_shapes for each param group flattened tensor
145
-
146
- fp32_flat_groups = [
147
- torch.cat(state_dicts[i][OPTIMIZER_STATE_DICT][fp32_groups_key],
148
- 0) for i in range(len(state_dicts))
149
- ]
150
-
151
- return zero_stage, world_size, fp32_flat_groups
152
-
153
-
154
- def _get_fp32_state_dict_from_zero_checkpoint(ds_checkpoint_dir):
155
- """
156
- Returns fp32 state_dict reconstructed from ds checkpoint
157
-
158
- Args:
159
- - ``ds_checkpoint_dir``: path to the deepspeed checkpoint folder (where the optimizer files are)
160
-
161
- """
162
- print(f"Processing zero checkpoint '{ds_checkpoint_dir}'")
163
-
164
- optim_files = get_optim_files(ds_checkpoint_dir)
165
- zero_stage, world_size, fp32_flat_groups = parse_optim_states(optim_files, ds_checkpoint_dir)
166
- print(
167
- f"Detected checkpoint of type zero stage {zero_stage}, world_size: {world_size}")
168
-
169
- model_file = get_model_state_file(ds_checkpoint_dir, zero_stage)
170
- buffers, param_shapes, ds_version = parse_model_state(model_file)
171
- print(f'Parsing checkpoint created by deepspeed=={ds_version}')
172
-
173
- if zero_stage == 2:
174
- return _get_fp32_state_dict_from_zero2_checkpoint(world_size,
175
- param_shapes,
176
- fp32_flat_groups,
177
- buffers)
178
- elif zero_stage == 3:
179
- return _get_fp32_state_dict_from_zero3_checkpoint(world_size,
180
- param_shapes,
181
- fp32_flat_groups,
182
- buffers)
183
-
184
-
185
- def _get_fp32_state_dict_from_zero2_checkpoint(world_size,
186
- param_shapes,
187
- fp32_flat_groups,
188
- buffers):
189
-
190
- # Reconstruction protocol:
191
- #
192
- # XXX: document this
193
-
194
- if debug:
195
- for i in range(world_size):
196
- for j in range(len(fp32_flat_groups[0])):
197
- print(
198
- f"{FP32_FLAT_GROUPS}[{i}][{j}].shape={fp32_flat_groups[i][j].shape}")
199
-
200
- # XXX: memory usage doubles here (zero2)
201
- num_param_groups = len(fp32_flat_groups[0])
202
- merged_single_partition_of_fp32_groups = []
203
- for i in range(num_param_groups):
204
- merged_partitions = [sd[i] for sd in fp32_flat_groups]
205
- full_single_fp32_vector = torch.cat(merged_partitions, 0)
206
- merged_single_partition_of_fp32_groups.append(full_single_fp32_vector)
207
- avail_numel = sum([
208
- full_single_fp32_vector.numel()
209
- for full_single_fp32_vector in merged_single_partition_of_fp32_groups
210
- ])
211
-
212
- if debug:
213
- wanted_params = sum([len(shapes) for shapes in param_shapes])
214
- wanted_numel = sum(
215
- [sum(shape.numel() for shape in shapes.values()) for shapes in param_shapes])
216
- # not asserting if there is a mismatch due to possible padding
217
- print(f"Have {avail_numel} numels to process.")
218
- print(f"Need {wanted_numel} numels in {wanted_params} params.")
219
-
220
- state_dict = OrderedDict()
221
-
222
- # buffers
223
- state_dict.update(buffers)
224
- if debug:
225
- print(f"added {len(buffers)} buffers")
226
-
227
- # params
228
- # XXX: for huge models that can't fit into the host's RAM we will have to recode this to support
229
- # out-of-core computing solution
230
- total_numel = 0
231
- total_params = 0
232
- for shapes, full_single_fp32_vector in zip(param_shapes, merged_single_partition_of_fp32_groups):
233
- offset = 0
234
- avail_numel = full_single_fp32_vector.numel()
235
- for name, shape in shapes.items():
236
-
237
- unpartitioned_numel = shape.numel()
238
- total_numel += unpartitioned_numel
239
- total_params += 1
240
-
241
- if debug:
242
- print(
243
- f"{name} full shape: {shape} unpartitioned numel {unpartitioned_numel} "
244
- )
245
- state_dict[name] = full_single_fp32_vector.narrow(
246
- 0,
247
- offset,
248
- unpartitioned_numel).view(shape)
249
- offset += unpartitioned_numel
250
-
251
- # Z2 started to align to 2*world_size to improve nccl performance. Therefore both offset and
252
- # avail_numel can differ by anywhere between 0..2*world_size. Due to two unrelated complex
253
- # paddings performed in the code it's almost impossible to predict the exact numbers w/o the
254
- # live optimizer object, so we are checking that the numbers are within the right range
255
- align_to = 2 * world_size
256
-
257
- def zero2_align(x):
258
- return align_to * math.ceil(x / align_to)
259
-
260
- if debug:
261
- print(f"original offset={offset}, avail_numel={avail_numel}")
262
-
263
- offset = zero2_align(offset)
264
- avail_numel = zero2_align(avail_numel)
265
-
266
- if debug:
267
- print(f"aligned offset={offset}, avail_numel={avail_numel}")
268
-
269
- # Sanity check
270
- if offset != avail_numel:
271
- raise ValueError(
272
- f"consumed {offset} numels out of {avail_numel} - something is wrong")
273
-
274
- print(
275
- f"Reconstructed fp32 state dict with {total_params} params {total_numel} elements"
276
- )
277
-
278
- return state_dict
279
-
280
-
281
- def zero3_partitioned_param_info(unpartitioned_numel, world_size):
282
- remainder = unpartitioned_numel % world_size
283
- padding_numel = (world_size - remainder) if remainder else 0
284
- partitioned_numel = math.ceil(unpartitioned_numel / world_size)
285
- return partitioned_numel, padding_numel
286
-
287
-
288
- def _get_fp32_state_dict_from_zero3_checkpoint(world_size,
289
- param_shapes,
290
- fp32_flat_groups,
291
- buffers):
292
-
293
- # Reconstruction protocol: For zero3 we need to zip the partitions together at boundary of each
294
- # param, re-consolidating each param, while dealing with padding if any
295
-
296
- avail_numel = fp32_flat_groups[0].numel() * world_size
297
- # merge list of dicts, preserving order
298
- param_shapes = {k: v for d in param_shapes for k, v in d.items()}
299
-
300
- if debug:
301
- for i in range(world_size):
302
- print(f"{FP32_FLAT_GROUPS}[{i}].shape={fp32_flat_groups[i].shape}")
303
-
304
- wanted_params = len(param_shapes)
305
- wanted_numel = sum(shape.numel() for shape in param_shapes.values())
306
- # not asserting if there is a mismatch due to possible padding
307
- print(f"Have {avail_numel} numels to process.")
308
- print(f"Need {wanted_numel} numels in {wanted_params} params.")
309
-
310
- state_dict = OrderedDict()
311
-
312
- # buffers
313
- state_dict.update(buffers)
314
- if debug:
315
- print(f"added {len(buffers)} buffers")
316
-
317
- # params
318
- # XXX: for huge models that can't fit into the host's RAM we will have to recode this to support
319
- # out-of-core computing solution
320
- offset = 0
321
- total_numel = 0
322
- total_params = 0
323
- for name, shape in param_shapes.items():
324
-
325
- unpartitioned_numel = shape.numel()
326
- total_numel += unpartitioned_numel
327
- total_params += 1
328
-
329
- partitioned_numel, partitioned_padding_numel = zero3_partitioned_param_info(unpartitioned_numel, world_size)
330
-
331
- if debug:
332
- print(
333
- f"{total_params} {name} full shape: {shape} partition0 numel={partitioned_numel} partitioned_padding_numel={partitioned_padding_numel}"
334
- )
335
-
336
- # XXX: memory usage doubles here
337
- state_dict[name] = torch.cat(
338
- tuple(fp32_flat_groups[i].narrow(0,
339
- offset,
340
- partitioned_numel)
341
- for i in range(world_size)),
342
- 0).narrow(0,
343
- 0,
344
- unpartitioned_numel).view(shape)
345
- offset += partitioned_numel
346
-
347
- offset *= world_size
348
-
349
- # Sanity check
350
- if offset != avail_numel:
351
- raise ValueError(
352
- f"consumed {offset} numels out of {avail_numel} - something is wrong")
353
-
354
- print(
355
- f"Reconstructed fp32 state dict with {total_params} params {total_numel} elements"
356
- )
357
-
358
- return state_dict
359
-
360
-
361
- def get_fp32_state_dict_from_zero_checkpoint(checkpoint_dir, tag=None):
362
- """
363
- Convert ZeRO 2 or 3 checkpoint into a single fp32 consolidated state_dict that can be loaded with
364
- ``load_state_dict()`` and used for training without DeepSpeed or shared with others, for example
365
- via a model hub.
366
-
367
- Args:
368
- - ``checkpoint_dir``: path to the desired checkpoint folder
369
- - ``tag``: checkpoint tag used as a unique identifier for checkpoint. If not provided will attempt to load tag in 'latest' file. e.g., ``global_step14``
370
-
371
- Returns:
372
- - pytorch ``state_dict``
373
-
374
- Note: this approach may not work if your application doesn't have sufficient free CPU memory and
375
- you may need to use the offline approach using the ``zero_to_fp32.py`` script that is saved with
376
- the checkpoint.
377
-
378
- A typical usage might be ::
379
-
380
- from deepspeed.utils.zero_to_fp32 import get_fp32_state_dict_from_zero_checkpoint
381
- # do the training and checkpoint saving
382
- state_dict = get_fp32_state_dict_from_zero_checkpoint(checkpoint_dir) # already on cpu
383
- model = model.cpu() # move to cpu
384
- model.load_state_dict(state_dict)
385
- # submit to model hub or save the model to share with others
386
-
387
- In this example the ``model`` will no longer be usable in the deepspeed context of the same
388
- application. i.e. you will need to re-initialize the deepspeed engine, since
389
- ``model.load_state_dict(state_dict)`` will remove all the deepspeed magic from it.
390
-
391
- If you want it all done for you, use ``load_state_dict_from_zero_checkpoint`` instead.
392
-
393
- """
394
- if tag is None:
395
- latest_path = os.path.join(checkpoint_dir, 'latest')
396
- if os.path.isfile(latest_path):
397
- with open(latest_path, 'r') as fd:
398
- tag = fd.read().strip()
399
- else:
400
- raise ValueError(f"Unable to find 'latest' file at {latest_path}")
401
-
402
- ds_checkpoint_dir = os.path.join(checkpoint_dir, tag)
403
-
404
- if not os.path.isdir(ds_checkpoint_dir):
405
- raise FileNotFoundError(f"Directory '{ds_checkpoint_dir}' doesn't exist")
406
-
407
- return _get_fp32_state_dict_from_zero_checkpoint(ds_checkpoint_dir)
408
-
409
-
410
- def convert_zero_checkpoint_to_fp32_state_dict(checkpoint_dir, output_file, tag=None):
411
- """
412
- Convert ZeRO 2 or 3 checkpoint into a single fp32 consolidated ``state_dict`` file that can be
413
- loaded with ``torch.load(file)`` + ``load_state_dict()`` and used for training without DeepSpeed.
414
-
415
- Args:
416
- - ``checkpoint_dir``: path to the desired checkpoint folder. (one that contains the tag-folder, like ``global_step14``)
417
- - ``output_file``: path to the pytorch fp32 state_dict output file (e.g. path/pytorch_model.bin)
418
- - ``tag``: checkpoint tag used as a unique identifier for checkpoint. If not provided will attempt to load tag in the file named ``latest`` in the checkpoint folder, e.g., ``global_step14``
419
- """
420
-
421
- state_dict = get_fp32_state_dict_from_zero_checkpoint(checkpoint_dir, tag)
422
- print(f"Saving fp32 state dict to {output_file}")
423
- torch.save(state_dict, output_file)
424
-
425
-
426
- def load_state_dict_from_zero_checkpoint(model, checkpoint_dir, tag=None):
427
- """
428
- 1. Put the provided model to cpu
429
- 2. Convert ZeRO 2 or 3 checkpoint into a single fp32 consolidated ``state_dict``
430
- 3. Load it into the provided model
431
-
432
- Args:
433
- - ``model``: the model object to update
434
- - ``checkpoint_dir``: path to the desired checkpoint folder. (one that contains the tag-folder, like ``global_step14``)
435
- - ``tag``: checkpoint tag used as a unique identifier for checkpoint. If not provided will attempt to load tag in the file named ``latest`` in the checkpoint folder, e.g., ``global_step14``
436
-
437
- Returns:
438
- - ``model`: modified model
439
-
440
- Make sure you have plenty of CPU memory available before you call this function. If you don't
441
- have enough use the ``zero_to_fp32.py`` utility to do the conversion. You will find it
442
- conveniently placed for you in the checkpoint folder.
443
-
444
- A typical usage might be ::
445
-
446
- from deepspeed.utils.zero_to_fp32 import load_state_dict_from_zero_checkpoint
447
- model = load_state_dict_from_zero_checkpoint(trainer.model, checkpoint_dir)
448
- # submit to model hub or save the model to share with others
449
-
450
- Note, that once this was run, the ``model`` will no longer be usable in the deepspeed context
451
- of the same application. i.e. you will need to re-initialize the deepspeed engine, since
452
- ``model.load_state_dict(state_dict)`` will remove all the deepspeed magic from it.
453
-
454
- """
455
- logger.info(f"Extracting fp32 weights")
456
- state_dict = get_fp32_state_dict_from_zero_checkpoint(checkpoint_dir, tag)
457
-
458
- logger.info(f"Overwriting model with fp32 weights")
459
- model = model.cpu()
460
- model.load_state_dict(state_dict, strict=False)
461
-
462
- return model
463
-
464
-
465
- if __name__ == "__main__":
466
-
467
- parser = argparse.ArgumentParser()
468
- parser.add_argument(
469
- "checkpoint_dir",
470
- type=str,
471
- help="path to the desired checkpoint folder, e.g., path/checkpoint-12")
472
- parser.add_argument(
473
- "output_file",
474
- type=str,
475
- help=
476
- "path to the pytorch fp32 state_dict output file (e.g. path/checkpoint-12/pytorch_model.bin)"
477
- )
478
- parser.add_argument("-d", "--debug", action='store_true', help="enable debug")
479
- args = parser.parse_args()
480
-
481
- debug = args.debug
482
-
483
- convert_zero_checkpoint_to_fp32_state_dict(args.checkpoint_dir, args.output_file)