MultiClinNER-CZ / README.md

richardjonker2000

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metadata

tags:
  - named-entity-recognition
  - clinical-nlp
  - multiclinner
  - multi-head-crf
  - token-classification
language:
  - cz
license: apache-2.0

MultiClinNER CZ Models

Clinical NER models for CZ, trained with Multi-Head CRF architecture.

Best Model

Model: ufal-C64-H3-E60-Arandom-%0.1-P0.5-42
Best F1: 0.6998
Branch: main

Usage

# Load the best model (main branch)
from transformers import AutoTokenizer, AutoModelForTokenClassification

model = AutoModelForTokenClassification.from_pretrained("IEETA/MultiClinNER-CZ")
tokenizer = AutoTokenizer.from_pretrained("IEETA/MultiClinNER-CZ")

# Load a specific model variant
model = AutoModelForTokenClassification.from_pretrained("IEETA/MultiClinNER-CZ", revision="BRANCH_NAME")

All Models (20 variants)

Branch	Model	Best?
`main`	`ufal-C64-H3-E60-Arandom-%0.1-P0.5-42`	Yes
`ufal-C64-H1-E60-Arandom-pct0.25-P0.5-123`	`ufal-C64-H1-E60-Arandom-%0.25-P0.5-123`
`ufal-C64-H1-E60-Arandom-pct0.25-P0.5-42`	`ufal-C64-H1-E60-Arandom-%0.25-P0.5-42`
`ufal-C64-H1-E60-Arandom-pct0.25-P0.5-456`	`ufal-C64-H1-E60-Arandom-%0.25-P0.5-456`
`ufal-C64-H1-E60-Arandom-pct0.25-P0.5-999`	`ufal-C64-H1-E60-Arandom-%0.25-P0.5-999`
`ufal-C64-H3-E60-Anone-pct0.2-P0.5-123`	`ufal-C64-H3-E60-Anone-%0.2-P0.5-123`
`ufal-C64-H3-E60-Anone-pct0.2-P0.5-42`	`ufal-C64-H3-E60-Anone-%0.2-P0.5-42`
`ufal-C64-H3-E60-Anone-pct0.2-P0.5-456`	`ufal-C64-H3-E60-Anone-%0.2-P0.5-456`
`ufal-C64-H3-E60-Anone-pct0.2-P0.5-999`	`ufal-C64-H3-E60-Anone-%0.2-P0.5-999`
`ufal-C64-H3-E60-Arandom-pct0.1-P0.5-123`	`ufal-C64-H3-E60-Arandom-%0.1-P0.5-123`
`ufal-C64-H3-E60-Arandom-pct0.1-P0.5-456`	`ufal-C64-H3-E60-Arandom-%0.1-P0.5-456`
`ufal-C64-H3-E60-Arandom-pct0.1-P0.5-999`	`ufal-C64-H3-E60-Arandom-%0.1-P0.5-999`
`ufal-C64-H3-E60-Arandom-pct0.25-P0.2-123`	`ufal-C64-H3-E60-Arandom-%0.25-P0.2-123`
`ufal-C64-H3-E60-Arandom-pct0.25-P0.2-42`	`ufal-C64-H3-E60-Arandom-%0.25-P0.2-42`
`ufal-C64-H3-E60-Arandom-pct0.25-P0.2-456`	`ufal-C64-H3-E60-Arandom-%0.25-P0.2-456`
`ufal-C64-H3-E60-Arandom-pct0.25-P0.2-999`	`ufal-C64-H3-E60-Arandom-%0.25-P0.2-999`
`ufal-C64-H3-E60-Aukn-pct0.1-P0.5-123`	`ufal-C64-H3-E60-Aukn-%0.1-P0.5-123`
`ufal-C64-H3-E60-Aukn-pct0.1-P0.5-42`	`ufal-C64-H3-E60-Aukn-%0.1-P0.5-42`
`ufal-C64-H3-E60-Aukn-pct0.1-P0.5-456`	`ufal-C64-H3-E60-Aukn-%0.1-P0.5-456`
`ufal-C64-H3-E60-Aukn-pct0.1-P0.5-999`	`ufal-C64-H3-E60-Aukn-%0.1-P0.5-999`