FIVE-MGI commited on
Commit
5f49d20
1 Parent(s): f968cda

Upload 24 files

Browse files
Files changed (25) hide show
  1. .gitattributes +3 -0
  2. SNIM20 InceptionV3 (FigS8 b)/FIVE_metadata.json +319 -0
  3. SNIM20 InceptionV3 (FigS8 b)/KSM/keras_metadata.pb +3 -0
  4. SNIM20 InceptionV3 (FigS8 b)/KSM/saved_model.pb +3 -0
  5. SNIM20 InceptionV3 (FigS8 b)/KSM/variables/variables.data-00000-of-00001 +3 -0
  6. SNIM20 InceptionV3 (FigS8 b)/KSM/variables/variables.index +0 -0
  7. SNIM20 InceptionV3 (FigS8 b)/acc_0.6145 IncepV3 CNN.onnx +3 -0
  8. SNIM20 InceptionV3 (FigS8 b)/acc_0.6145 IncepV3 CNN.pb +3 -0
  9. SNIM20 InceptionV3 (FigS8 b)/acc_0.6145 IncepV3 CNNs_7 kn_4 flt_25 iRt_1.25 ds__787, 243, 215, 204, 39_ nE_26,256 bSz_64 bNm_0 i_6.txt +0 -0
  10. SNIM20 NASNetMobile (FigS8 c)/FIVE_metadata.json +319 -0
  11. SNIM20 NASNetMobile (FigS8 c)/KSM/keras_metadata.pb +3 -0
  12. SNIM20 NASNetMobile (FigS8 c)/KSM/saved_model.pb +3 -0
  13. SNIM20 NASNetMobile (FigS8 c)/KSM/variables/variables.data-00000-of-00001 +3 -0
  14. SNIM20 NASNetMobile (FigS8 c)/KSM/variables/variables.index +0 -0
  15. SNIM20 NASNetMobile (FigS8 c)/acc_0.5983 NasNetM CNN.onnx +3 -0
  16. SNIM20 NASNetMobile (FigS8 c)/acc_0.5983 NasNetM CNN.pb +3 -0
  17. SNIM20 NASNetMobile (FigS8 c)/acc_0.5983 NasNetM CNNs_6 kn_4 flt_21 iRt_1.25 ds__196, 181, 41_ nE_26,256 bSz_64 bNm_0 i_41.txt +0 -0
  18. SNIM20 XceptionV1 (FigS8 d)/FIVE_metadata.json +319 -0
  19. SNIM20 XceptionV1 (FigS8 d)/KSM/keras_metadata.pb +3 -0
  20. SNIM20 XceptionV1 (FigS8 d)/KSM/saved_model.pb +3 -0
  21. SNIM20 XceptionV1 (FigS8 d)/KSM/variables/variables.data-00000-of-00001 +3 -0
  22. SNIM20 XceptionV1 (FigS8 d)/KSM/variables/variables.index +0 -0
  23. SNIM20 XceptionV1 (FigS8 d)/acc_0.6086 Xcption CNN.onnx +3 -0
  24. SNIM20 XceptionV1 (FigS8 d)/acc_0.6086 Xcption CNN.pb +3 -0
  25. SNIM20 XceptionV1 (FigS8 d)/acc_0.6086 Xcption CNNs_6 kn_2 flt_32 iRt_1.75 ds__592, 200, 156, 64, 40_ nE_26,256 bSz_64 bNm_0 i_42.txt +0 -0
.gitattributes CHANGED
@@ -43,3 +43,6 @@ SCIM12[[:space:]](Fig[[:space:]]S9[[:space:]]b)/KSM/variables/variables.data-000
43
  SCIM12[[:space:]](Fig7,[[:space:]]Fig[[:space:]]S9[[:space:]]a)/KSM/variables/variables.data-00000-of-00001 filter=lfs diff=lfs merge=lfs -text
44
  SNIM14[[:space:]](Fig5d)/KSM/variables/variables.data-00000-of-00001 filter=lfs diff=lfs merge=lfs -text
45
  SNIM3[[:space:]](Fig5c)/KSM/variables/variables.data-00000-of-00001 filter=lfs diff=lfs merge=lfs -text
 
 
 
 
43
  SCIM12[[:space:]](Fig7,[[:space:]]Fig[[:space:]]S9[[:space:]]a)/KSM/variables/variables.data-00000-of-00001 filter=lfs diff=lfs merge=lfs -text
44
  SNIM14[[:space:]](Fig5d)/KSM/variables/variables.data-00000-of-00001 filter=lfs diff=lfs merge=lfs -text
45
  SNIM3[[:space:]](Fig5c)/KSM/variables/variables.data-00000-of-00001 filter=lfs diff=lfs merge=lfs -text
46
+ SNIM20[[:space:]]InceptionV3[[:space:]](FigS8[[:space:]]b)/KSM/variables/variables.data-00000-of-00001 filter=lfs diff=lfs merge=lfs -text
47
+ SNIM20[[:space:]]NASNetMobile[[:space:]](FigS8[[:space:]]c)/KSM/variables/variables.data-00000-of-00001 filter=lfs diff=lfs merge=lfs -text
48
+ SNIM20[[:space:]]XceptionV1[[:space:]](FigS8[[:space:]]d)/KSM/variables/variables.data-00000-of-00001 filter=lfs diff=lfs merge=lfs -text
SNIM20 InceptionV3 (FigS8 b)/FIVE_metadata.json ADDED
@@ -0,0 +1,319 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "ModelName": "acc_0.6145 IncepV3 CNNs_7 kn_4 flt_25 iRt_1.25 ds__787, 243, 215, 204, 39_ nE_26,256 bSz_64 bNm_0 i_6",
3
+ "ModelPath": "S:\\Raft\\FIV827\\002 SF Sort\\M FIVE 0912\\acc_0.6145 IncepV3 CNNs_7 kn_4 flt_25 iRt_1.25 ds__787, 243, 215, 204, 39_ nE_26,256 bSz_64 bNm_0 i_6",
4
+ "ModelType": "cat",
5
+ "ModelDate": "2023-09-12 08:55:12.436109",
6
+ "ThresholdDefault": 0.7,
7
+ "TrainingSize": 10152,
8
+ "ColumnsIncluded": "",
9
+ "OutputMapping": {},
10
+ "AdditionalNote": "",
11
+ "ModelParams": "",
12
+ "PreferredInputShape": "",
13
+ "InputChannelNames": [],
14
+ "WillModelRescale": false,
15
+ "WillModelResize": false,
16
+ "ResizeByCropTrue_ZoomFalse": true,
17
+ "Index2ClassInfo": {
18
+ "0": {
19
+ "Index": 0,
20
+ "Name": "0 Empty",
21
+ "TrainingCount": 519,
22
+ "RGB": [
23
+ 153,
24
+ 149,
25
+ 206
26
+ ],
27
+ "Comment": "",
28
+ "Ignore": false,
29
+ "ThresholdMultiplier": 1,
30
+ "ScalerMin": 0,
31
+ "ScalerMax": 1
32
+ },
33
+ "1": {
34
+ "Index": 1,
35
+ "Name": "0 Neurites No Cell",
36
+ "TrainingCount": 435,
37
+ "RGB": [
38
+ 159,
39
+ 150,
40
+ 50
41
+ ],
42
+ "Comment": "",
43
+ "Ignore": false,
44
+ "ThresholdMultiplier": 1,
45
+ "ScalerMin": 0,
46
+ "ScalerMax": 1
47
+ },
48
+ "2": {
49
+ "Index": 2,
50
+ "Name": "1 Cell Disconnected Neurite",
51
+ "TrainingCount": 64,
52
+ "RGB": [
53
+ 64,
54
+ 138,
55
+ 71
56
+ ],
57
+ "Comment": "",
58
+ "Ignore": false,
59
+ "ThresholdMultiplier": 1,
60
+ "ScalerMin": 0,
61
+ "ScalerMax": 1
62
+ },
63
+ "3": {
64
+ "Index": 3,
65
+ "Name": "1 Cell Tub No Neurite",
66
+ "TrainingCount": 1734,
67
+ "RGB": [
68
+ 143,
69
+ 85,
70
+ 66
71
+ ],
72
+ "Comment": "",
73
+ "Ignore": false,
74
+ "ThresholdMultiplier": 1,
75
+ "ScalerMin": 0,
76
+ "ScalerMax": 1
77
+ },
78
+ "4": {
79
+ "Index": 4,
80
+ "Name": "1 Dead (no tubulin)",
81
+ "TrainingCount": 275,
82
+ "RGB": [
83
+ 42,
84
+ 12,
85
+ 242
86
+ ],
87
+ "Comment": "",
88
+ "Ignore": false,
89
+ "ThresholdMultiplier": 1,
90
+ "ScalerMin": 0,
91
+ "ScalerMax": 1
92
+ },
93
+ "5": {
94
+ "Index": 5,
95
+ "Name": "1 Neuron",
96
+ "TrainingCount": 1646,
97
+ "RGB": [
98
+ 158,
99
+ 84,
100
+ 76
101
+ ],
102
+ "Comment": "",
103
+ "Ignore": false,
104
+ "ThresholdMultiplier": 1,
105
+ "ScalerMin": 0,
106
+ "ScalerMax": 1
107
+ },
108
+ "6": {
109
+ "Index": 6,
110
+ "Name": "1 Neuron And Disconnected",
111
+ "TrainingCount": 64,
112
+ "RGB": [
113
+ 232,
114
+ 45,
115
+ 254
116
+ ],
117
+ "Comment": "",
118
+ "Ignore": false,
119
+ "ThresholdMultiplier": 1,
120
+ "ScalerMin": 0,
121
+ "ScalerMax": 1
122
+ },
123
+ "7": {
124
+ "Index": 7,
125
+ "Name": "1 Neuron Bulbs",
126
+ "TrainingCount": 8,
127
+ "RGB": [
128
+ 64,
129
+ 141,
130
+ 5
131
+ ],
132
+ "Comment": "",
133
+ "Ignore": false,
134
+ "ThresholdMultiplier": 1,
135
+ "ScalerMin": 0,
136
+ "ScalerMax": 1
137
+ },
138
+ "8": {
139
+ "Index": 8,
140
+ "Name": "1 Neuron On Edge",
141
+ "TrainingCount": 22,
142
+ "RGB": [
143
+ 105,
144
+ 117,
145
+ 107
146
+ ],
147
+ "Comment": "",
148
+ "Ignore": false,
149
+ "ThresholdMultiplier": 1,
150
+ "ScalerMin": 0,
151
+ "ScalerMax": 1
152
+ },
153
+ "9": {
154
+ "Index": 9,
155
+ "Name": "1 Neuron Poor Focus",
156
+ "TrainingCount": 43,
157
+ "RGB": [
158
+ 202,
159
+ 21,
160
+ 120
161
+ ],
162
+ "Comment": "",
163
+ "Ignore": false,
164
+ "ThresholdMultiplier": 1,
165
+ "ScalerMin": 0,
166
+ "ScalerMax": 1
167
+ },
168
+ "10": {
169
+ "Index": 10,
170
+ "Name": "1 Neuron Very Short",
171
+ "TrainingCount": 325,
172
+ "RGB": [
173
+ 28,
174
+ 213,
175
+ 176
176
+ ],
177
+ "Comment": "",
178
+ "Ignore": false,
179
+ "ThresholdMultiplier": 1,
180
+ "ScalerMin": 0,
181
+ "ScalerMax": 1
182
+ },
183
+ "11": {
184
+ "Index": 11,
185
+ "Name": "2 Nuc 1 Neuron",
186
+ "TrainingCount": 172,
187
+ "RGB": [
188
+ 76,
189
+ 172,
190
+ 105
191
+ ],
192
+ "Comment": "",
193
+ "Ignore": false,
194
+ "ThresholdMultiplier": 1,
195
+ "ScalerMin": 0,
196
+ "ScalerMax": 1
197
+ },
198
+ "12": {
199
+ "Index": 12,
200
+ "Name": "2 Nuc 1 Soma",
201
+ "TrainingCount": 84,
202
+ "RGB": [
203
+ 243,
204
+ 0,
205
+ 10
206
+ ],
207
+ "Comment": "",
208
+ "Ignore": false,
209
+ "ThresholdMultiplier": 1,
210
+ "ScalerMin": 0,
211
+ "ScalerMax": 1
212
+ },
213
+ "13": {
214
+ "Index": 13,
215
+ "Name": "2 Nuc 2 Neurons",
216
+ "TrainingCount": 402,
217
+ "RGB": [
218
+ 160,
219
+ 104,
220
+ 93
221
+ ],
222
+ "Comment": "",
223
+ "Ignore": false,
224
+ "ThresholdMultiplier": 1,
225
+ "ScalerMin": 0,
226
+ "ScalerMax": 1
227
+ },
228
+ "14": {
229
+ "Index": 14,
230
+ "Name": "2 Nuc Dead",
231
+ "TrainingCount": 49,
232
+ "RGB": [
233
+ 117,
234
+ 212,
235
+ 79
236
+ ],
237
+ "Comment": "",
238
+ "Ignore": false,
239
+ "ThresholdMultiplier": 1,
240
+ "ScalerMin": 0,
241
+ "ScalerMax": 1
242
+ },
243
+ "15": {
244
+ "Index": 15,
245
+ "Name": "2 Nuc Tub No Neurite",
246
+ "TrainingCount": 197,
247
+ "RGB": [
248
+ 65,
249
+ 134,
250
+ 219
251
+ ],
252
+ "Comment": "",
253
+ "Ignore": false,
254
+ "ThresholdMultiplier": 1,
255
+ "ScalerMin": 0,
256
+ "ScalerMax": 1
257
+ },
258
+ "16": {
259
+ "Index": 16,
260
+ "Name": "3 Nuclei",
261
+ "TrainingCount": 511,
262
+ "RGB": [
263
+ 70,
264
+ 97,
265
+ 38
266
+ ],
267
+ "Comment": "",
268
+ "Ignore": false,
269
+ "ThresholdMultiplier": 1,
270
+ "ScalerMin": 0,
271
+ "ScalerMax": 1
272
+ },
273
+ "17": {
274
+ "Index": 17,
275
+ "Name": "4 Nuclei",
276
+ "TrainingCount": 249,
277
+ "RGB": [
278
+ 243,
279
+ 7,
280
+ 57
281
+ ],
282
+ "Comment": "",
283
+ "Ignore": false,
284
+ "ThresholdMultiplier": 1,
285
+ "ScalerMin": 0,
286
+ "ScalerMax": 1
287
+ },
288
+ "18": {
289
+ "Index": 18,
290
+ "Name": "5+ Nuclei",
291
+ "TrainingCount": 3011,
292
+ "RGB": [
293
+ 86,
294
+ 92,
295
+ 191
296
+ ],
297
+ "Comment": "",
298
+ "Ignore": false,
299
+ "ThresholdMultiplier": 1,
300
+ "ScalerMin": 0,
301
+ "ScalerMax": 1
302
+ },
303
+ "19": {
304
+ "Index": 19,
305
+ "Name": "6 Out of Focus",
306
+ "TrainingCount": 342,
307
+ "RGB": [
308
+ 56,
309
+ 71,
310
+ 3
311
+ ],
312
+ "Comment": "",
313
+ "Ignore": false,
314
+ "ThresholdMultiplier": 1,
315
+ "ScalerMin": 0,
316
+ "ScalerMax": 1
317
+ }
318
+ }
319
+ }
SNIM20 InceptionV3 (FigS8 b)/KSM/keras_metadata.pb ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:47871f909a97330b912f0583717777fd6fee428b3afe11d46fae51df92422609
3
+ size 1038816
SNIM20 InceptionV3 (FigS8 b)/KSM/saved_model.pb ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:8a8840bbe1b15ff51ff930738579c78e316a26c71b705ec5ffd22a2b32b3e22b
3
+ size 5956575
SNIM20 InceptionV3 (FigS8 b)/KSM/variables/variables.data-00000-of-00001 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:70471f83163f07f278546dae23cd206a310d8f6bf43c4ab76f76dfa2bfce021d
3
+ size 110443063
SNIM20 InceptionV3 (FigS8 b)/KSM/variables/variables.index ADDED
Binary file (27.2 kB). View file
 
SNIM20 InceptionV3 (FigS8 b)/acc_0.6145 IncepV3 CNN.onnx ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6b79a934ad0c760fc07c04eb7d5c90a09d6ab603a623bff5afce0fe73f5f20c4
3
+ size 94797158
SNIM20 InceptionV3 (FigS8 b)/acc_0.6145 IncepV3 CNN.pb ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:16472a0a5b9b30715fe3cc3570b8e88b4685fda98e295914fe6f70bbc5568113
3
+ size 95132882
SNIM20 InceptionV3 (FigS8 b)/acc_0.6145 IncepV3 CNNs_7 kn_4 flt_25 iRt_1.25 ds__787, 243, 215, 204, 39_ nE_26,256 bSz_64 bNm_0 i_6.txt ADDED
File without changes
SNIM20 NASNetMobile (FigS8 c)/FIVE_metadata.json ADDED
@@ -0,0 +1,319 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "ModelName": "acc_0.5983 NasNetM CNNs_6 kn_4 flt_21 iRt_1.25 ds__196, 181, 41_ nE_26,256 bSz_64 bNm_0 i_41",
3
+ "ModelPath": "S:\\Raft\\FIV827\\002 SF Sort\\M FIVE 0913\\acc_0.5983 NasNetM CNNs_6 kn_4 flt_21 iRt_1.25 ds__196, 181, 41_ nE_26,256 bSz_64 bNm_0 i_41",
4
+ "ModelType": "cat",
5
+ "ModelDate": "2023-09-14 16:03:34.157838",
6
+ "ThresholdDefault": 0.7,
7
+ "TrainingSize": 10152,
8
+ "ColumnsIncluded": "",
9
+ "OutputMapping": {},
10
+ "AdditionalNote": "",
11
+ "ModelParams": "",
12
+ "PreferredInputShape": "",
13
+ "InputChannelNames": [],
14
+ "WillModelRescale": false,
15
+ "WillModelResize": false,
16
+ "ResizeByCropTrue_ZoomFalse": true,
17
+ "Index2ClassInfo": {
18
+ "0": {
19
+ "Index": 0,
20
+ "Name": "0 Empty",
21
+ "TrainingCount": 519,
22
+ "RGB": [
23
+ 95,
24
+ 70,
25
+ 166
26
+ ],
27
+ "Comment": "",
28
+ "Ignore": false,
29
+ "ThresholdMultiplier": 1,
30
+ "ScalerMin": 0,
31
+ "ScalerMax": 1
32
+ },
33
+ "1": {
34
+ "Index": 1,
35
+ "Name": "0 Neurites No Cell",
36
+ "TrainingCount": 435,
37
+ "RGB": [
38
+ 23,
39
+ 102,
40
+ 145
41
+ ],
42
+ "Comment": "",
43
+ "Ignore": false,
44
+ "ThresholdMultiplier": 1,
45
+ "ScalerMin": 0,
46
+ "ScalerMax": 1
47
+ },
48
+ "2": {
49
+ "Index": 2,
50
+ "Name": "1 Cell Disconnected Neurite",
51
+ "TrainingCount": 64,
52
+ "RGB": [
53
+ 13,
54
+ 156,
55
+ 248
56
+ ],
57
+ "Comment": "",
58
+ "Ignore": false,
59
+ "ThresholdMultiplier": 1,
60
+ "ScalerMin": 0,
61
+ "ScalerMax": 1
62
+ },
63
+ "3": {
64
+ "Index": 3,
65
+ "Name": "1 Cell Tub No Neurite",
66
+ "TrainingCount": 1734,
67
+ "RGB": [
68
+ 219,
69
+ 15,
70
+ 103
71
+ ],
72
+ "Comment": "",
73
+ "Ignore": false,
74
+ "ThresholdMultiplier": 1,
75
+ "ScalerMin": 0,
76
+ "ScalerMax": 1
77
+ },
78
+ "4": {
79
+ "Index": 4,
80
+ "Name": "1 Dead (no tubulin)",
81
+ "TrainingCount": 275,
82
+ "RGB": [
83
+ 98,
84
+ 6,
85
+ 54
86
+ ],
87
+ "Comment": "",
88
+ "Ignore": false,
89
+ "ThresholdMultiplier": 1,
90
+ "ScalerMin": 0,
91
+ "ScalerMax": 1
92
+ },
93
+ "5": {
94
+ "Index": 5,
95
+ "Name": "1 Neuron",
96
+ "TrainingCount": 1646,
97
+ "RGB": [
98
+ 212,
99
+ 55,
100
+ 62
101
+ ],
102
+ "Comment": "",
103
+ "Ignore": false,
104
+ "ThresholdMultiplier": 1,
105
+ "ScalerMin": 0,
106
+ "ScalerMax": 1
107
+ },
108
+ "6": {
109
+ "Index": 6,
110
+ "Name": "1 Neuron And Disconnected",
111
+ "TrainingCount": 64,
112
+ "RGB": [
113
+ 192,
114
+ 110,
115
+ 41
116
+ ],
117
+ "Comment": "",
118
+ "Ignore": false,
119
+ "ThresholdMultiplier": 1,
120
+ "ScalerMin": 0,
121
+ "ScalerMax": 1
122
+ },
123
+ "7": {
124
+ "Index": 7,
125
+ "Name": "1 Neuron Bulbs",
126
+ "TrainingCount": 8,
127
+ "RGB": [
128
+ 201,
129
+ 244,
130
+ 85
131
+ ],
132
+ "Comment": "",
133
+ "Ignore": false,
134
+ "ThresholdMultiplier": 1,
135
+ "ScalerMin": 0,
136
+ "ScalerMax": 1
137
+ },
138
+ "8": {
139
+ "Index": 8,
140
+ "Name": "1 Neuron On Edge",
141
+ "TrainingCount": 22,
142
+ "RGB": [
143
+ 16,
144
+ 2,
145
+ 167
146
+ ],
147
+ "Comment": "",
148
+ "Ignore": false,
149
+ "ThresholdMultiplier": 1,
150
+ "ScalerMin": 0,
151
+ "ScalerMax": 1
152
+ },
153
+ "9": {
154
+ "Index": 9,
155
+ "Name": "1 Neuron Poor Focus",
156
+ "TrainingCount": 43,
157
+ "RGB": [
158
+ 185,
159
+ 50,
160
+ 216
161
+ ],
162
+ "Comment": "",
163
+ "Ignore": false,
164
+ "ThresholdMultiplier": 1,
165
+ "ScalerMin": 0,
166
+ "ScalerMax": 1
167
+ },
168
+ "10": {
169
+ "Index": 10,
170
+ "Name": "1 Neuron Very Short",
171
+ "TrainingCount": 325,
172
+ "RGB": [
173
+ 142,
174
+ 66,
175
+ 10
176
+ ],
177
+ "Comment": "",
178
+ "Ignore": false,
179
+ "ThresholdMultiplier": 1,
180
+ "ScalerMin": 0,
181
+ "ScalerMax": 1
182
+ },
183
+ "11": {
184
+ "Index": 11,
185
+ "Name": "2 Nuc 1 Neuron",
186
+ "TrainingCount": 172,
187
+ "RGB": [
188
+ 182,
189
+ 43,
190
+ 202
191
+ ],
192
+ "Comment": "",
193
+ "Ignore": false,
194
+ "ThresholdMultiplier": 1,
195
+ "ScalerMin": 0,
196
+ "ScalerMax": 1
197
+ },
198
+ "12": {
199
+ "Index": 12,
200
+ "Name": "2 Nuc 1 Soma",
201
+ "TrainingCount": 84,
202
+ "RGB": [
203
+ 72,
204
+ 170,
205
+ 1
206
+ ],
207
+ "Comment": "",
208
+ "Ignore": false,
209
+ "ThresholdMultiplier": 1,
210
+ "ScalerMin": 0,
211
+ "ScalerMax": 1
212
+ },
213
+ "13": {
214
+ "Index": 13,
215
+ "Name": "2 Nuc 2 Neurons",
216
+ "TrainingCount": 402,
217
+ "RGB": [
218
+ 26,
219
+ 197,
220
+ 24
221
+ ],
222
+ "Comment": "",
223
+ "Ignore": false,
224
+ "ThresholdMultiplier": 1,
225
+ "ScalerMin": 0,
226
+ "ScalerMax": 1
227
+ },
228
+ "14": {
229
+ "Index": 14,
230
+ "Name": "2 Nuc Dead",
231
+ "TrainingCount": 49,
232
+ "RGB": [
233
+ 133,
234
+ 90,
235
+ 89
236
+ ],
237
+ "Comment": "",
238
+ "Ignore": false,
239
+ "ThresholdMultiplier": 1,
240
+ "ScalerMin": 0,
241
+ "ScalerMax": 1
242
+ },
243
+ "15": {
244
+ "Index": 15,
245
+ "Name": "2 Nuc Tub No Neurite",
246
+ "TrainingCount": 197,
247
+ "RGB": [
248
+ 74,
249
+ 29,
250
+ 206
251
+ ],
252
+ "Comment": "",
253
+ "Ignore": false,
254
+ "ThresholdMultiplier": 1,
255
+ "ScalerMin": 0,
256
+ "ScalerMax": 1
257
+ },
258
+ "16": {
259
+ "Index": 16,
260
+ "Name": "3 Nuclei",
261
+ "TrainingCount": 511,
262
+ "RGB": [
263
+ 136,
264
+ 46,
265
+ 147
266
+ ],
267
+ "Comment": "",
268
+ "Ignore": false,
269
+ "ThresholdMultiplier": 1,
270
+ "ScalerMin": 0,
271
+ "ScalerMax": 1
272
+ },
273
+ "17": {
274
+ "Index": 17,
275
+ "Name": "4 Nuclei",
276
+ "TrainingCount": 249,
277
+ "RGB": [
278
+ 188,
279
+ 142,
280
+ 144
281
+ ],
282
+ "Comment": "",
283
+ "Ignore": false,
284
+ "ThresholdMultiplier": 1,
285
+ "ScalerMin": 0,
286
+ "ScalerMax": 1
287
+ },
288
+ "18": {
289
+ "Index": 18,
290
+ "Name": "5+ Nuclei",
291
+ "TrainingCount": 3011,
292
+ "RGB": [
293
+ 78,
294
+ 12,
295
+ 3
296
+ ],
297
+ "Comment": "",
298
+ "Ignore": false,
299
+ "ThresholdMultiplier": 1,
300
+ "ScalerMin": 0,
301
+ "ScalerMax": 1
302
+ },
303
+ "19": {
304
+ "Index": 19,
305
+ "Name": "6 Out of Focus",
306
+ "TrainingCount": 342,
307
+ "RGB": [
308
+ 225,
309
+ 153,
310
+ 163
311
+ ],
312
+ "Comment": "",
313
+ "Ignore": false,
314
+ "ThresholdMultiplier": 1,
315
+ "ScalerMin": 0,
316
+ "ScalerMax": 1
317
+ }
318
+ }
319
+ }
SNIM20 NASNetMobile (FigS8 c)/KSM/keras_metadata.pb ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:8b31d4622358ef01a1e3d18ed6168f028df47109838a6494c4b7896ead1b7e5a
3
+ size 2726926
SNIM20 NASNetMobile (FigS8 c)/KSM/saved_model.pb ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:7313f2d302ccf388c684ecd1bb07d390d8e406aa092c87defedf34447859d00e
3
+ size 16281567
SNIM20 NASNetMobile (FigS8 c)/KSM/variables/variables.data-00000-of-00001 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:0f4e7abc35b982a0d759b353e0e87658eb6fba942774f080779c04b7ea014960
3
+ size 20760821
SNIM20 NASNetMobile (FigS8 c)/KSM/variables/variables.index ADDED
Binary file (66.2 kB). View file
 
SNIM20 NASNetMobile (FigS8 c)/acc_0.5983 NasNetM CNN.onnx ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:33f45353ad380be6ff02ef30fd300b54b5c922647ea659457c825b08695a3c6e
3
+ size 18425868
SNIM20 NASNetMobile (FigS8 c)/acc_0.5983 NasNetM CNN.pb ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6c5cd8539148691443fabdd1c5ebacaf83584c8840f1ba43c0490ead5953ba66
3
+ size 18857416
SNIM20 NASNetMobile (FigS8 c)/acc_0.5983 NasNetM CNNs_6 kn_4 flt_21 iRt_1.25 ds__196, 181, 41_ nE_26,256 bSz_64 bNm_0 i_41.txt ADDED
File without changes
SNIM20 XceptionV1 (FigS8 d)/FIVE_metadata.json ADDED
@@ -0,0 +1,319 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "ModelName": "acc_0.6086 Xcption CNNs_6 kn_2 flt_32 iRt_1.75 ds__592, 200, 156, 64, 40_ nE_26,256 bSz_64 bNm_0 i_42",
3
+ "ModelPath": "S:\\Raft\\FIV827\\002 SF Sort\\M FIVE 0913\\acc_0.6086 Xcption CNNs_6 kn_2 flt_32 iRt_1.75 ds__592, 200, 156, 64, 40_ nE_26,256 bSz_64 bNm_0 i_42",
4
+ "ModelType": "cat",
5
+ "ModelDate": "2023-09-14 16:16:17.835623",
6
+ "ThresholdDefault": 0.7,
7
+ "TrainingSize": 10152,
8
+ "ColumnsIncluded": "",
9
+ "OutputMapping": {},
10
+ "AdditionalNote": "",
11
+ "ModelParams": "",
12
+ "PreferredInputShape": "",
13
+ "InputChannelNames": [],
14
+ "WillModelRescale": false,
15
+ "WillModelResize": false,
16
+ "ResizeByCropTrue_ZoomFalse": true,
17
+ "Index2ClassInfo": {
18
+ "0": {
19
+ "Index": 0,
20
+ "Name": "0 Empty",
21
+ "TrainingCount": 519,
22
+ "RGB": [
23
+ 67,
24
+ 151,
25
+ 143
26
+ ],
27
+ "Comment": "",
28
+ "Ignore": false,
29
+ "ThresholdMultiplier": 1,
30
+ "ScalerMin": 0,
31
+ "ScalerMax": 1
32
+ },
33
+ "1": {
34
+ "Index": 1,
35
+ "Name": "0 Neurites No Cell",
36
+ "TrainingCount": 435,
37
+ "RGB": [
38
+ 145,
39
+ 1,
40
+ 9
41
+ ],
42
+ "Comment": "",
43
+ "Ignore": false,
44
+ "ThresholdMultiplier": 1,
45
+ "ScalerMin": 0,
46
+ "ScalerMax": 1
47
+ },
48
+ "2": {
49
+ "Index": 2,
50
+ "Name": "1 Cell Disconnected Neurite",
51
+ "TrainingCount": 64,
52
+ "RGB": [
53
+ 219,
54
+ 10,
55
+ 226
56
+ ],
57
+ "Comment": "",
58
+ "Ignore": false,
59
+ "ThresholdMultiplier": 1,
60
+ "ScalerMin": 0,
61
+ "ScalerMax": 1
62
+ },
63
+ "3": {
64
+ "Index": 3,
65
+ "Name": "1 Cell Tub No Neurite",
66
+ "TrainingCount": 1734,
67
+ "RGB": [
68
+ 113,
69
+ 170,
70
+ 156
71
+ ],
72
+ "Comment": "",
73
+ "Ignore": false,
74
+ "ThresholdMultiplier": 1,
75
+ "ScalerMin": 0,
76
+ "ScalerMax": 1
77
+ },
78
+ "4": {
79
+ "Index": 4,
80
+ "Name": "1 Dead (no tubulin)",
81
+ "TrainingCount": 275,
82
+ "RGB": [
83
+ 181,
84
+ 195,
85
+ 178
86
+ ],
87
+ "Comment": "",
88
+ "Ignore": false,
89
+ "ThresholdMultiplier": 1,
90
+ "ScalerMin": 0,
91
+ "ScalerMax": 1
92
+ },
93
+ "5": {
94
+ "Index": 5,
95
+ "Name": "1 Neuron",
96
+ "TrainingCount": 1646,
97
+ "RGB": [
98
+ 49,
99
+ 142,
100
+ 247
101
+ ],
102
+ "Comment": "",
103
+ "Ignore": false,
104
+ "ThresholdMultiplier": 1,
105
+ "ScalerMin": 0,
106
+ "ScalerMax": 1
107
+ },
108
+ "6": {
109
+ "Index": 6,
110
+ "Name": "1 Neuron And Disconnected",
111
+ "TrainingCount": 64,
112
+ "RGB": [
113
+ 162,
114
+ 135,
115
+ 16
116
+ ],
117
+ "Comment": "",
118
+ "Ignore": false,
119
+ "ThresholdMultiplier": 1,
120
+ "ScalerMin": 0,
121
+ "ScalerMax": 1
122
+ },
123
+ "7": {
124
+ "Index": 7,
125
+ "Name": "1 Neuron Bulbs",
126
+ "TrainingCount": 8,
127
+ "RGB": [
128
+ 19,
129
+ 209,
130
+ 184
131
+ ],
132
+ "Comment": "",
133
+ "Ignore": false,
134
+ "ThresholdMultiplier": 1,
135
+ "ScalerMin": 0,
136
+ "ScalerMax": 1
137
+ },
138
+ "8": {
139
+ "Index": 8,
140
+ "Name": "1 Neuron On Edge",
141
+ "TrainingCount": 22,
142
+ "RGB": [
143
+ 248,
144
+ 99,
145
+ 173
146
+ ],
147
+ "Comment": "",
148
+ "Ignore": false,
149
+ "ThresholdMultiplier": 1,
150
+ "ScalerMin": 0,
151
+ "ScalerMax": 1
152
+ },
153
+ "9": {
154
+ "Index": 9,
155
+ "Name": "1 Neuron Poor Focus",
156
+ "TrainingCount": 43,
157
+ "RGB": [
158
+ 103,
159
+ 81,
160
+ 108
161
+ ],
162
+ "Comment": "",
163
+ "Ignore": false,
164
+ "ThresholdMultiplier": 1,
165
+ "ScalerMin": 0,
166
+ "ScalerMax": 1
167
+ },
168
+ "10": {
169
+ "Index": 10,
170
+ "Name": "1 Neuron Very Short",
171
+ "TrainingCount": 325,
172
+ "RGB": [
173
+ 74,
174
+ 156,
175
+ 26
176
+ ],
177
+ "Comment": "",
178
+ "Ignore": false,
179
+ "ThresholdMultiplier": 1,
180
+ "ScalerMin": 0,
181
+ "ScalerMax": 1
182
+ },
183
+ "11": {
184
+ "Index": 11,
185
+ "Name": "2 Nuc 1 Neuron",
186
+ "TrainingCount": 172,
187
+ "RGB": [
188
+ 58,
189
+ 58,
190
+ 127
191
+ ],
192
+ "Comment": "",
193
+ "Ignore": false,
194
+ "ThresholdMultiplier": 1,
195
+ "ScalerMin": 0,
196
+ "ScalerMax": 1
197
+ },
198
+ "12": {
199
+ "Index": 12,
200
+ "Name": "2 Nuc 1 Soma",
201
+ "TrainingCount": 84,
202
+ "RGB": [
203
+ 113,
204
+ 176,
205
+ 119
206
+ ],
207
+ "Comment": "",
208
+ "Ignore": false,
209
+ "ThresholdMultiplier": 1,
210
+ "ScalerMin": 0,
211
+ "ScalerMax": 1
212
+ },
213
+ "13": {
214
+ "Index": 13,
215
+ "Name": "2 Nuc 2 Neurons",
216
+ "TrainingCount": 402,
217
+ "RGB": [
218
+ 57,
219
+ 232,
220
+ 199
221
+ ],
222
+ "Comment": "",
223
+ "Ignore": false,
224
+ "ThresholdMultiplier": 1,
225
+ "ScalerMin": 0,
226
+ "ScalerMax": 1
227
+ },
228
+ "14": {
229
+ "Index": 14,
230
+ "Name": "2 Nuc Dead",
231
+ "TrainingCount": 49,
232
+ "RGB": [
233
+ 157,
234
+ 201,
235
+ 213
236
+ ],
237
+ "Comment": "",
238
+ "Ignore": false,
239
+ "ThresholdMultiplier": 1,
240
+ "ScalerMin": 0,
241
+ "ScalerMax": 1
242
+ },
243
+ "15": {
244
+ "Index": 15,
245
+ "Name": "2 Nuc Tub No Neurite",
246
+ "TrainingCount": 197,
247
+ "RGB": [
248
+ 204,
249
+ 94,
250
+ 123
251
+ ],
252
+ "Comment": "",
253
+ "Ignore": false,
254
+ "ThresholdMultiplier": 1,
255
+ "ScalerMin": 0,
256
+ "ScalerMax": 1
257
+ },
258
+ "16": {
259
+ "Index": 16,
260
+ "Name": "3 Nuclei",
261
+ "TrainingCount": 511,
262
+ "RGB": [
263
+ 108,
264
+ 252,
265
+ 206
266
+ ],
267
+ "Comment": "",
268
+ "Ignore": false,
269
+ "ThresholdMultiplier": 1,
270
+ "ScalerMin": 0,
271
+ "ScalerMax": 1
272
+ },
273
+ "17": {
274
+ "Index": 17,
275
+ "Name": "4 Nuclei",
276
+ "TrainingCount": 249,
277
+ "RGB": [
278
+ 158,
279
+ 56,
280
+ 91
281
+ ],
282
+ "Comment": "",
283
+ "Ignore": false,
284
+ "ThresholdMultiplier": 1,
285
+ "ScalerMin": 0,
286
+ "ScalerMax": 1
287
+ },
288
+ "18": {
289
+ "Index": 18,
290
+ "Name": "5+ Nuclei",
291
+ "TrainingCount": 3011,
292
+ "RGB": [
293
+ 232,
294
+ 177,
295
+ 144
296
+ ],
297
+ "Comment": "",
298
+ "Ignore": false,
299
+ "ThresholdMultiplier": 1,
300
+ "ScalerMin": 0,
301
+ "ScalerMax": 1
302
+ },
303
+ "19": {
304
+ "Index": 19,
305
+ "Name": "6 Out of Focus",
306
+ "TrainingCount": 342,
307
+ "RGB": [
308
+ 128,
309
+ 36,
310
+ 77
311
+ ],
312
+ "Comment": "",
313
+ "Ignore": false,
314
+ "ThresholdMultiplier": 1,
315
+ "ScalerMin": 0,
316
+ "ScalerMax": 1
317
+ }
318
+ }
319
+ }
SNIM20 XceptionV1 (FigS8 d)/KSM/keras_metadata.pb ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:9b8dca563e34ddc39b0ae5f17aba4129ace2bd41c462fc82e7fd0cf0b0ff267c
3
+ size 526782
SNIM20 XceptionV1 (FigS8 d)/KSM/saved_model.pb ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e9f4275e6761fb5100b959354a0a5b0ddfb5affd416ab11aa818a2f0382badb4
3
+ size 3382390
SNIM20 XceptionV1 (FigS8 d)/KSM/variables/variables.data-00000-of-00001 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:2aaf6b9b09bde10b761bf7b506e897b49aeadd03df8e967d9d81b57a4ef9d9c0
3
+ size 100139835
SNIM20 XceptionV1 (FigS8 d)/KSM/variables/variables.index ADDED
Binary file (19.3 kB). View file
 
SNIM20 XceptionV1 (FigS8 d)/acc_0.6086 Xcption CNN.onnx ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:32604bf701d95269f8a90445ce54da5e1540b273bbc87655760f6429f88c23e4
3
+ size 88925444
SNIM20 XceptionV1 (FigS8 d)/acc_0.6086 Xcption CNN.pb ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:75b6a24d9e250ee04a96dc14301957b824293e0fa4e9ed2a9099805551ae6258
3
+ size 89124102
SNIM20 XceptionV1 (FigS8 d)/acc_0.6086 Xcption CNNs_6 kn_2 flt_32 iRt_1.75 ds__592, 200, 156, 64, 40_ nE_26,256 bSz_64 bNm_0 i_42.txt ADDED
File without changes