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sd-geneprod-roles-v2

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Dr. Jorge Abreu Vicente
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metadata
license: apache-2.0
tags:
  - generated_from_trainer
datasets:
  - source_data_nlp
metrics:
  - precision
  - recall
  - f1
model-index:
  - name: sd-geneprod-roles-v2
    results:
      - task:
          name: Token Classification
          type: token-classification
        dataset:
          name: source_data_nlp
          type: source_data_nlp
          args: GENEPROD_ROLES
        metrics:
          - name: Precision
            type: precision
            value: 0.9227577212638568
          - name: Recall
            type: recall
            value: 0.9288143683990692
          - name: F1
            type: f1
            value: 0.9257761389318425

sd-geneprod-roles-v2

This model is a fine-tuned version of michiyasunaga/BioLinkBERT-large on the source_data_nlp dataset. It achieves the following results on the evaluation set:

  • Loss: 0.0136
  • Accuracy Score: 0.9950
  • Precision: 0.9228
  • Recall: 0.9288
  • F1: 0.9258

Model description

More information needed

Intended uses & limitations

More information needed

Training and evaluation data

More information needed

Training procedure

Training hyperparameters

The following hyperparameters were used during training:

  • learning_rate: 5e-05
  • train_batch_size: 32
  • eval_batch_size: 256
  • seed: 42
  • optimizer: Adafactor
  • lr_scheduler_type: linear
  • num_epochs: 1.0

Training results

Training Loss Epoch Step Validation Loss Accuracy Score Precision Recall F1
0.014 1.0 1569 0.0136 0.9950 0.9228 0.9288 0.9258

Framework versions

  • Transformers 4.20.0
  • Pytorch 1.11.0a0+bfe5ad2
  • Datasets 1.17.0
  • Tokenizers 0.12.1