yurakuratov
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docs: add finetuned models to readme
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README.md
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Source code and data: https://github.com/AIRI-Institute/GENA_LM
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Paper: https://www.biorxiv.org/content/10.1101/2023.06.12.
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## Examples
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Source code and data: https://github.com/AIRI-Institute/GENA_LM
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Paper: https://www.biorxiv.org/content/10.1101/2023.06.12.544594
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This repository also contains models that are finetuned on downstream tasks:
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- promoters prediction 300bp (branch [promoters_300_run_1](https://huggingface.co/AIRI-Institute/gena-lm-bert-large-t2t/tree/promoters_300_run_1))
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- promoters prediction 2000bp (branch [promoters_2000_run_1](https://huggingface.co/AIRI-Institute/gena-lm-bert-large-t2t/tree/promoters_2000_run_1))
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- splice sites prediction (branch [spliceai_run_1](https://huggingface.co/AIRI-Institute/gena-lm-bert-large-t2t/tree/spliceai_run_1))
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and models that are used in our [GENA-Web](https://dnalm.airi.net) web tool for genomic sequence annotation:
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- promoters prediction 2000bp (branch [gena_web_promoters_2000](https://huggingface.co/AIRI-Institute/gena-lm-bert-large-t2t/tree/gena_web_promoters_2000))
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## Examples
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