lgq12697
commited on
Commit
•
3a78399
1
Parent(s):
bb2fed0
update model
Browse files- config.json +50 -1
- model.safetensors +3 -0
- test_metrics.json +0 -1
config.json
CHANGED
@@ -1 +1,50 @@
|
|
1 |
-
{
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
{
|
2 |
+
"_name_or_path": "../model/finetune/PlantDna_Mamba_3mer/plant-multi-species-histone-modifications-H3K27ac",
|
3 |
+
"architectures": [
|
4 |
+
"MambaForSequenceClassification"
|
5 |
+
],
|
6 |
+
"bos_token_id": 0,
|
7 |
+
"conv_kernel": 4,
|
8 |
+
"d_inner": 1536,
|
9 |
+
"d_model": 768,
|
10 |
+
"eos_token_id": 0,
|
11 |
+
"expand": 2,
|
12 |
+
"fused_add_norm": true,
|
13 |
+
"hidden_act": "silu",
|
14 |
+
"hidden_size": 768,
|
15 |
+
"id2label": {
|
16 |
+
"0": "Not_modification",
|
17 |
+
"1": "modification"
|
18 |
+
},
|
19 |
+
"initializer_range": 0.1,
|
20 |
+
"intermediate_size": 1536,
|
21 |
+
"label2id": {
|
22 |
+
"Not_modification": 0,
|
23 |
+
"modification": 1
|
24 |
+
},
|
25 |
+
"layer_norm_epsilon": 1e-05,
|
26 |
+
"model_type": "mamba",
|
27 |
+
"n_layer": 24,
|
28 |
+
"num_hidden_layers": 24,
|
29 |
+
"pad_token_id": 0,
|
30 |
+
"pad_vocab_size_multiple": 8,
|
31 |
+
"problem_type": "single_label_classification",
|
32 |
+
"rescale_prenorm_residual": false,
|
33 |
+
"residual_in_fp32": true,
|
34 |
+
"rms_norm": true,
|
35 |
+
"ssm_cfg": {},
|
36 |
+
"state_size": 16,
|
37 |
+
"time_step_floor": 0.0001,
|
38 |
+
"time_step_init_scheme": "random",
|
39 |
+
"time_step_max": 0.1,
|
40 |
+
"time_step_min": 0.001,
|
41 |
+
"time_step_rank": 48,
|
42 |
+
"time_step_scale": 1.0,
|
43 |
+
"torch_dtype": "float32",
|
44 |
+
"transformers_version": "4.45.0.dev0",
|
45 |
+
"use_bias": false,
|
46 |
+
"use_cache": false,
|
47 |
+
"use_conv_bias": true,
|
48 |
+
"use_mambapy": false,
|
49 |
+
"vocab_size": 75
|
50 |
+
}
|
model.safetensors
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:03ed3417dde907009070f48caf03cff5e453b3f7ed6fa450538fa8435f46624d
|
3 |
+
size 362343960
|
test_metrics.json
DELETED
@@ -1 +0,0 @@
|
|
1 |
-
{'test_loss': 0.4393389821052551, 'test_accuracy': 0.79736328125, 'test_f1': 0.8010355738805255, 'test_precision': 0.7867771708419665, 'test_recall': 0.8158203125, 'test_matthews_correlation': 0.5951321785645645, 'test_runtime': 32.108, 'test_samples_per_second': 318.923, 'test_steps_per_second': 19.933}
|
|
|
|