Upload 5 files

config.json

@@ -0,0 +1,30 @@
+{
+  "_name_or_path": "/sujin/Models/SaProt/SaProt_1.3B_AF2_start",
+  "architectures": [
+    "EsmForMaskedLM"
+  ],
+  "attention_probs_dropout_prob": 0.1,
+  "classifier_dropout": null,
+  "emb_layer_norm_before": false,
+  "esmfold_config": null,
+  "hidden_act": "gelu",
+  "hidden_dropout_prob": 0.1,
+  "hidden_size": 1280,
+  "initializer_range": 0.02,
+  "intermediate_size": 5120,
+  "is_folding_model": false,
+  "layer_norm_eps": 1e-05,
+  "mask_token_id": 4,
+  "max_position_embeddings": 1026,
+  "model_type": "esm",
+  "num_attention_heads": 20,
+  "num_hidden_layers": 66,
+  "pad_token_id": 1,
+  "position_embedding_type": "rotary",
+  "token_dropout": true,
+  "torch_dtype": "float32",
+  "transformers_version": "4.28.0",
+  "use_cache": true,
+  "vocab_list": null,
+  "vocab_size": 446
+}

pytorch_model.bin

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:66c3cc1257f4c048eba48639373b9071f959be3f8417f9b8ba56be986c0563d6
+size 5204098228

special_tokens_map.json

@@ -0,0 +1,7 @@
+{
+  "cls_token": "<cls>",
+  "eos_token": "<eos>",
+  "mask_token": "<mask>",
+  "pad_token": "<pad>",
+  "unk_token": "<unk>"
+}

tokenizer_config.json

@@ -0,0 +1,5 @@
+{
+  "clean_up_tokenization_spaces": true,
+  "model_max_length": 1000000000000000019884624838656,
+  "tokenizer_class": "EsmTokenizer"
+}

vocab.txt

@@ -0,0 +1,446 @@
+<cls>
+<pad>
+<eos>
+<unk>
+<mask>
+Ap
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+#p
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+#c
+##