ttlanhhh/mlma-biogpt
Browse files- README.md +65 -0
- config.json +51 -0
- merges.txt +0 -0
- model.safetensors +3 -0
- runs/Apr11_21-45-29_bunbo/events.out.tfevents.1712886331.bunbo.3542636.0 +3 -0
- runs/Apr11_21-45-29_bunbo/events.out.tfevents.1712887689.bunbo.3542636.1 +3 -0
- special_tokens_map.json +7 -0
- tokenizer_config.json +44 -0
- training_args.bin +3 -0
- vocab.json +0 -0
README.md
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---
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license: mit
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base_model: microsoft/biogpt
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tags:
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- generated_from_trainer
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model-index:
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- name: results
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results: []
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---
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<!-- This model card has been generated automatically according to the information the Trainer had access to. You
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should probably proofread and complete it, then remove this comment. -->
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# results
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This model is a fine-tuned version of [microsoft/biogpt](https://huggingface.co/microsoft/biogpt) on an unknown dataset.
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It achieves the following results on the evaluation set:
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- Loss: 0.1870
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- Overall Precision: 0.4821
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- Overall Recall: 0.5760
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- Overall F1: 0.5249
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- Overall Accuracy: 0.9506
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## Model description
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More information needed
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## Intended uses & limitations
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More information needed
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## Training and evaluation data
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More information needed
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## Training procedure
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### Training hyperparameters
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The following hyperparameters were used during training:
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- learning_rate: 2e-05
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- train_batch_size: 4
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- eval_batch_size: 4
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- seed: 42
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- optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
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- lr_scheduler_type: linear
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- num_epochs: 5
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### Training results
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| Training Loss | Epoch | Step | Validation Loss | Overall Precision | Overall Recall | Overall F1 | Overall Accuracy |
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|:-------------:|:-----:|:----:|:---------------:|:-----------------:|:--------------:|:----------:|:----------------:|
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| 0.2295 | 1.0 | 1358 | 0.1735 | 0.3341 | 0.3926 | 0.3610 | 0.9483 |
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| 0.1401 | 2.0 | 2716 | 0.1512 | 0.3905 | 0.5413 | 0.4537 | 0.9509 |
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| 0.0948 | 3.0 | 4074 | 0.1627 | 0.4667 | 0.5070 | 0.4860 | 0.9578 |
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| 0.0778 | 4.0 | 5432 | 0.1672 | 0.4831 | 0.5642 | 0.5205 | 0.9587 |
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| 0.0614 | 5.0 | 6790 | 0.1755 | 0.4967 | 0.5781 | 0.5344 | 0.9594 |
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### Framework versions
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- Transformers 4.39.3
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- Pytorch 1.12.1+cu113
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- Datasets 2.18.0
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- Tokenizers 0.15.2
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config.json
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{
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"_name_or_path": "microsoft/biogpt",
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"activation_dropout": 0.0,
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"activation_function": "gelu_new",
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"architectures": [
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"GPT2ForTokenClassification"
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],
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"attention_probs_dropout_prob": 0.1,
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"attn_pdrop": 0.1,
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"bos_token_id": 0,
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"embd_pdrop": 0.1,
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"eos_token_id": 2,
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"hidden_act": "gelu",
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"hidden_dropout_prob": 0.1,
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"id2label": {
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"0": "LABEL_0",
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"1": "LABEL_1",
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"2": "LABEL_2"
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},
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"initializer_range": 0.02,
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"intermediate_size": 4096,
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"label2id": {
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"LABEL_0": 0,
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"LABEL_1": 1,
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"LABEL_2": 2
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},
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"layer_norm_eps": 1e-12,
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"layer_norm_epsilon": 1e-05,
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"layerdrop": 0.0,
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"model_type": "gpt2",
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"n_embd": 1024,
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"n_head": 16,
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"n_inner": null,
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"n_layer": 24,
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"n_positions": 1024,
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"pad_token_id": 1,
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"reorder_and_upcast_attn": false,
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"resid_pdrop": 0.1,
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"scale_attn_by_inverse_layer_idx": false,
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"scale_attn_weights": true,
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"scale_embedding": true,
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"summary_activation": null,
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"summary_first_dropout": 0.1,
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"summary_proj_to_labels": true,
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"summary_type": "cls_index",
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"summary_use_proj": true,
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"torch_dtype": "float32",
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"transformers_version": "4.39.3",
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"use_cache": true,
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"vocab_size": 42384
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}
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merges.txt
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model.safetensors
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version https://git-lfs.github.com/spec/v1
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oid sha256:7af87b39077fcb050ec6cb9c1d4269bbac2dc3b897b5bd37b16ce392200e6675
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size 1387087524
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runs/Apr11_21-45-29_bunbo/events.out.tfevents.1712886331.bunbo.3542636.0
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version https://git-lfs.github.com/spec/v1
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oid sha256:2ad8e4b94170da720d2c3eb53f642c83c97c11ebd2de5da53f735d6b6ddaea84
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size 10692
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runs/Apr11_21-45-29_bunbo/events.out.tfevents.1712887689.bunbo.3542636.1
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version https://git-lfs.github.com/spec/v1
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size 1096
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special_tokens_map.json
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{
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"bos_token": "<s>",
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"eos_token": "</s>",
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"pad_token": "<pad>",
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"sep_token": "</s>",
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"unk_token": "<unk>"
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}
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tokenizer_config.json
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{
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"added_tokens_decoder": {
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"0": {
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"content": "<s>",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"1": {
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"content": "<pad>",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"2": {
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"content": "</s>",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"3": {
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"content": "<unk>",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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}
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},
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"bos_token": "<s>",
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"clean_up_tokenization_spaces": true,
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"eos_token": "</s>",
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"model_max_length": 1024,
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"pad_token": "<pad>",
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"sep_token": "</s>",
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"tokenizer_class": "BioGptTokenizer",
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"unk_token": "<unk>"
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}
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training_args.bin
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version https://git-lfs.github.com/spec/v1
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oid sha256:2a84b3b03989c5240752411afa66863e6afa0fa79439ae31c6524f3f71cb553c
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size 4463
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vocab.json
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