|
{ |
|
"_name_or_path": "models\\tomaarsen\\span-marker-bert-base-uncased-sourcedata\\checkpoint-final", |
|
"architectures": [ |
|
"SpanMarkerModel" |
|
], |
|
"encoder": { |
|
"_name_or_path": "bert-base-uncased", |
|
"add_cross_attention": false, |
|
"architectures": [ |
|
"BertForMaskedLM" |
|
], |
|
"attention_probs_dropout_prob": 0.1, |
|
"bad_words_ids": null, |
|
"begin_suppress_tokens": null, |
|
"bos_token_id": null, |
|
"chunk_size_feed_forward": 0, |
|
"classifier_dropout": null, |
|
"cross_attention_hidden_size": null, |
|
"decoder_start_token_id": null, |
|
"diversity_penalty": 0.0, |
|
"do_sample": false, |
|
"early_stopping": false, |
|
"encoder_no_repeat_ngram_size": 0, |
|
"eos_token_id": null, |
|
"exponential_decay_length_penalty": null, |
|
"finetuning_task": null, |
|
"forced_bos_token_id": null, |
|
"forced_eos_token_id": null, |
|
"gradient_checkpointing": false, |
|
"hidden_act": "gelu", |
|
"hidden_dropout_prob": 0.1, |
|
"hidden_size": 768, |
|
"id2label": { |
|
"0": "O", |
|
"1": "B-SMALL_MOLECULE", |
|
"2": "I-SMALL_MOLECULE", |
|
"3": "B-GENEPROD", |
|
"4": "I-GENEPROD", |
|
"5": "B-SUBCELLULAR", |
|
"6": "I-SUBCELLULAR", |
|
"7": "B-CELL_TYPE", |
|
"8": "I-CELL_TYPE", |
|
"9": "B-TISSUE", |
|
"10": "I-TISSUE", |
|
"11": "B-ORGANISM", |
|
"12": "I-ORGANISM", |
|
"13": "B-EXP_ASSAY", |
|
"14": "I-EXP_ASSAY", |
|
"15": "B-DISEASE", |
|
"16": "I-DISEASE", |
|
"17": "B-CELL_LINE", |
|
"18": "I-CELL_LINE" |
|
}, |
|
"initializer_range": 0.02, |
|
"intermediate_size": 3072, |
|
"is_decoder": false, |
|
"is_encoder_decoder": false, |
|
"label2id": { |
|
"B-CELL_LINE": 17, |
|
"B-CELL_TYPE": 7, |
|
"B-DISEASE": 15, |
|
"B-EXP_ASSAY": 13, |
|
"B-GENEPROD": 3, |
|
"B-ORGANISM": 11, |
|
"B-SMALL_MOLECULE": 1, |
|
"B-SUBCELLULAR": 5, |
|
"B-TISSUE": 9, |
|
"I-CELL_LINE": 18, |
|
"I-CELL_TYPE": 8, |
|
"I-DISEASE": 16, |
|
"I-EXP_ASSAY": 14, |
|
"I-GENEPROD": 4, |
|
"I-ORGANISM": 12, |
|
"I-SMALL_MOLECULE": 2, |
|
"I-SUBCELLULAR": 6, |
|
"I-TISSUE": 10, |
|
"O": 0 |
|
}, |
|
"layer_norm_eps": 1e-12, |
|
"length_penalty": 1.0, |
|
"max_length": 20, |
|
"max_position_embeddings": 512, |
|
"min_length": 0, |
|
"model_type": "bert", |
|
"no_repeat_ngram_size": 0, |
|
"num_attention_heads": 12, |
|
"num_beam_groups": 1, |
|
"num_beams": 1, |
|
"num_hidden_layers": 12, |
|
"num_return_sequences": 1, |
|
"output_attentions": false, |
|
"output_hidden_states": false, |
|
"output_scores": false, |
|
"pad_token_id": 0, |
|
"position_embedding_type": "absolute", |
|
"prefix": null, |
|
"problem_type": null, |
|
"pruned_heads": {}, |
|
"remove_invalid_values": false, |
|
"repetition_penalty": 1.0, |
|
"return_dict": true, |
|
"return_dict_in_generate": false, |
|
"sep_token_id": null, |
|
"suppress_tokens": null, |
|
"task_specific_params": null, |
|
"temperature": 1.0, |
|
"tf_legacy_loss": false, |
|
"tie_encoder_decoder": false, |
|
"tie_word_embeddings": true, |
|
"tokenizer_class": null, |
|
"top_k": 50, |
|
"top_p": 1.0, |
|
"torch_dtype": null, |
|
"torchscript": false, |
|
"transformers_version": "4.33.0", |
|
"type_vocab_size": 2, |
|
"typical_p": 1.0, |
|
"use_bfloat16": false, |
|
"use_cache": true, |
|
"vocab_size": 30524 |
|
}, |
|
"entity_max_length": 8, |
|
"id2label": { |
|
"0": "O", |
|
"1": "CELL_LINE", |
|
"2": "CELL_TYPE", |
|
"3": "DISEASE", |
|
"4": "EXP_ASSAY", |
|
"5": "GENEPROD", |
|
"6": "ORGANISM", |
|
"7": "SMALL_MOLECULE", |
|
"8": "SUBCELLULAR", |
|
"9": "TISSUE" |
|
}, |
|
"id2reduced_id": { |
|
"0": 0, |
|
"1": 7, |
|
"2": 7, |
|
"3": 5, |
|
"4": 5, |
|
"5": 8, |
|
"6": 8, |
|
"7": 2, |
|
"8": 2, |
|
"9": 9, |
|
"10": 9, |
|
"11": 6, |
|
"12": 6, |
|
"13": 4, |
|
"14": 4, |
|
"15": 3, |
|
"16": 3, |
|
"17": 1, |
|
"18": 1 |
|
}, |
|
"label2id": { |
|
"CELL_LINE": 1, |
|
"CELL_TYPE": 2, |
|
"DISEASE": 3, |
|
"EXP_ASSAY": 4, |
|
"GENEPROD": 5, |
|
"O": 0, |
|
"ORGANISM": 6, |
|
"SMALL_MOLECULE": 7, |
|
"SUBCELLULAR": 8, |
|
"TISSUE": 9 |
|
}, |
|
"marker_max_length": 128, |
|
"max_next_context": null, |
|
"max_prev_context": null, |
|
"model_max_length": 256, |
|
"model_max_length_default": 512, |
|
"model_type": "span-marker", |
|
"span_marker_version": "1.3.1.dev", |
|
"torch_dtype": "float32", |
|
"trained_with_document_context": false, |
|
"transformers_version": "4.33.0", |
|
"vocab_size": 30524 |
|
} |
|
|