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| "id2label": { |
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| "1": "B-ChemicalEntity", |
| "2": "B-DiseaseOrPhenotypicFeature", |
| "3": "B-GeneOrGeneProduct", |
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| "8": "I-DiseaseOrPhenotypicFeature", |
| "9": "I-GeneOrGeneProduct", |
| "10": "I-OrganismTaxon", |
| "11": "I-SequenceVariant", |
| "12": "O" |
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| "I-DiseaseOrPhenotypicFeature": 8, |
| "I-GeneOrGeneProduct": 9, |
| "I-OrganismTaxon": 10, |
| "I-SequenceVariant": 11, |
| "O": 12 |
| }, |
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| "max_position_embeddings": 512, |
| "model_type": "bert", |
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| "num_hidden_layers": 12, |
| "pad_token_id": 0, |
| "position_embedding_type": "absolute", |
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| "model_name": "microsoft/BiomedNLP-PubMedBERT-base-uncased-abstract", |
| "output_dir": "output/ner_agent_detection", |
| "test_data": "data/train/ner_data/BioRED/processed/test_biored_sent_annotated.json", |
| "time_created": "2025-11-09", |
| "train_data": "data/train/ner_data/BioRED/processed/train_biored_sent_annotated.json", |
| "use_cached_dataset": true, |
| "val_data": "data/train/ner_data/BioRED/processed/val_biored_sent_annotated.json", |
| "version": "1.1" |
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| } |
|
|
