Spaces:
Running
on
CPU Upgrade
Running
on
CPU Upgrade
chore: update
Browse files
app.py
CHANGED
@@ -1,5 +1,6 @@
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import
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import shutil
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from pathlib import Path
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from time import time
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from typing import List, Tuple, Union
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@@ -7,33 +8,35 @@ from typing import List, Tuple, Union
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import gradio as gr
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import numpy as np
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import pandas as pd
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from
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from
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from sklearn.model_selection import train_test_split
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from concrete.ml.common.serialization.loaders import load
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from concrete.ml.deployment import FHEModelClient, FHEModelDev, FHEModelServer
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from concrete.ml.sklearn import XGBClassifier as ConcreteXGBoostClassifier
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import subprocess
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from preprocessing import ( # pylint: disable=wrong-import-position, no-name-in-module
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map_prediction,
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pretty_print,
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)
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from symptoms_categories import SYMPTOMS_LIST
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# This repository's directory
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REPO_DIR = Path(__file__).parent
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print(f"{REPO_DIR=}")
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# subprocess.Popen(["uvicorn", "server:app"], cwd=REPO_DIR)
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# time.sleep(3)
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def load_data():
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# Load data
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df_train = pd.read_csv("./data/Training_preprocessed.csv")
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@@ -61,75 +64,8 @@ def load_model(X_train, y_train):
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return classifier, circuit
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def key_gen():
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# Key serialization
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user_id = np.random.randint(0, 2**32)
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client = FHEModelClient(path_dir=path_to_model, key_dir=f".fhe_keys/{user_id}")
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client.load()
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# The client first need to create the private and evaluation keys.
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client.generate_private_and_evaluation_keys()
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# Get the serialized evaluation keys
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serialized_evaluation_keys = client.get_serialized_evaluation_keys()
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assert isinstance(serialized_evaluation_keys, bytes)
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np.save(f".fhe_keys/{user_id}/eval_key.npy", serialized_evaluation_keys)
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serialized_evaluation_keys_shorten = list(serialized_evaluation_keys)[:200]
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serialized_evaluation_keys_shorten_hex = "".join(
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f"{i:02x}" for i in serialized_evaluation_keys_shorten
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)
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# Evaluation keys can be quite large files but only have to be shared once with the server.
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# Check the size of the evaluation keys (in MB)
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return [
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serialized_evaluation_keys_shorten_hex,
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user_id,
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f"{len(serialized_evaluation_keys) / (10**6):.2f} MB",
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]
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def encode_quantize_encrypt(user_symptoms, user_id):
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# check if the key has been generated
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client = FHEModelClient(path_dir=path_to_model, key_dir=f".fhe_keys/{user_id}")
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client.load()
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user_symptoms = np.fromstring(user_symptoms[2:-2], dtype=int, sep=".").reshape(1, -1)
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quant_user_symptoms = client.model.quantize_input(user_symptoms)
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encrypted_quantized_user_symptoms = client.quantize_encrypt_serialize(user_symptoms)
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# print(client.model.predict(vect_x, fhe="simulate"), client.model.predict(vect_x, fhe="execute"))
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# pred_s = client.model.fhe_circuit.simulate(quant_vect)
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# pred_fhe = client.model.fhe_circuit.encrypt_run_decrypt(quant_vect) #
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# non alpha -> \X1124, base64 ou en exa
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# Compute size
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np.save(f".fhe_keys/{user_id}/encrypted_quant_vect.npy", encrypted_quantized_user_symptoms)
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encrypted_quantized_encoding_shorten = list(encrypted_quantized_user_symptoms)[:200]
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encrypted_quantized_encoding_shorten_hex = "".join(
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f"{i:02x}" for i in encrypted_quantized_encoding_shorten
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)
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return user_symptoms, quant_user_symptoms, encrypted_quantized_encoding_shorten_hex
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def decrypt_prediction(encrypted_quantized_vect, user_id):
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fhe_api = FHEModelClient(path_dir=path_to_model, key_dir=f".fhe_keys/{user_id}")
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fhe_api.load()
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fhe_api.generate_private_and_evaluation_keys(force=False)
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predictions = fhe_api.deserialize_decrypt_dequantize(encrypted_quantized_vect)
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return predictions
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def get_user_vect_symptoms_from_checkboxgroup(*user_symptoms) -> np.array:
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symptoms_vector = {key: 0 for key in
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for symptom_box in user_symptoms:
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for pretty_symptom in symptom_box:
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@@ -148,7 +84,7 @@ def get_user_vect_symptoms_from_checkboxgroup(*user_symptoms) -> np.array:
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return user_symptoms_vect
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def
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user_symptom_vector = df_test[df_test["prognosis"] == disease].iloc[0].values
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return pretty_print(columns_with_1)
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def
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)
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if not any(lst for lst in selected_symptoms if lst) and (
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selected_default_disease is None
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or (selected_default_disease is not None and len(selected_default_disease) < 1)
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):
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return {
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error_box: gr.update(
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visible=True, value="Enter a default disease or select your own symptoms"
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),
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}
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# Case 1: The user has checked his own symptoms
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if any(lst for lst in selected_symptoms if lst):
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return {
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user_vector_textbox: get_user_vect_symptoms_from_checkboxgroup(*selected_symptoms),
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}
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# Case 2: The user has selected a default disease
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if selected_default_disease is not None and len(selected_default_disease) > 0:
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return {
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user_vector_textbox:
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),
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error_box: gr.update(visible=False),
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**{
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box: get_user_symptoms_from_default_disease(selected_default_disease)
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for box in check_boxes
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}
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def clear_all_btn():
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return {
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user_id_textbox: None,
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eval_key_textbox: None,
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user_vector_textbox: None,
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**{box: None for box in check_boxes},
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}
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if __name__ == "__main__":
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print("Starting demo ...")
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(df_train, X_train, X_test), (df_test, y_train, y_test) = load_data()
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# Load the model
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with open("ConcreteXGBoostClassifier.pkl", "r", encoding="utf-8") as file:
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)
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check_boxes.append(check_box)
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# User symptom vector
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with gr.Row():
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user_vector_textbox = gr.Textbox(
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interactive=False,
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max_lines=100,
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)
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error_box = gr.Textbox(label="Error", visible=False)
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with gr.Row():
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# Submit botton
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submit_button = gr.Button("Submit")
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# Clear botton
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with gr.Column():
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clear_button = gr.Button("Clear"
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# Click submit botton
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submit_button.click(
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fn=
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inputs=[box_default, *check_boxes],
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outputs=[user_vector_textbox,
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)
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gr.Markdown("# Step 2: Generate the keys")
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gr.Markdown("Client side")
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with gr.Row():
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# User ID
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interactive=False,
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)
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outputs=[
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user_id_textbox,
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user_vector_textbox,
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eval_key_textbox,
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eval_key_len_textbox,
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box_default,
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error_box,
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*check_boxes,
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],
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)
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gr.Markdown("# Step 3: Encode the message with the private key")
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gr.Markdown("Client side")
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with gr.Row():
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label="Encrypted vector:", max_lines=4, interactive=False
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)
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inputs=[user_vector_textbox, user_id_textbox],
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outputs=[vect_textbox, quant_vect_textbox, encrypted_vect_textbox],
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)
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gr.Markdown("# Step 4: Run the FHE evaluation")
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label="Encrypted vector:", max_lines=4, interactive=False
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)
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decrypt_target_botton.click(
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)
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demo.launch()
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import os
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import shutil
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import subprocess
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from pathlib import Path
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from time import time
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from typing import List, Tuple, Union
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import gradio as gr
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import numpy as np
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import pandas as pd
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from preprocessing import pretty_print
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from symptoms_categories import SYMPTOMS_LIST
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from concrete.ml.common.serialization.loaders import load
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from concrete.ml.deployment import FHEModelClient, FHEModelDev, FHEModelServer
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from concrete.ml.sklearn import XGBClassifier as ConcreteXGBoostClassifier
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INPUT_BROWSER_LIMIT = 635
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# This repository's main necessary folders
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REPO_DIR = Path(__file__).parent
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MODEL_PATH = REPO_DIR / "client_folder"
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KEYS_PATH = REPO_DIR / ".fhe_keys"
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CLIENT_PATH = MODEL_PATH / "client.zip"
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SERVER_PATH = MODEL_PATH / "server.zip"
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# subprocess.Popen(["uvicorn", "server:app"], cwd=REPO_DIR)
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# time.sleep(3)
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def clean_directory():
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target_dir = ".fhe_keys"
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if os.path.exists(target_dir) and os.path.isdir(target_dir):
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shutil.rmtree(target_dir)
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print("The .fhe_keys directory and its contents have been successfully removed.")
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else:
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print("The .keys directory does not exist.")
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def load_data():
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# Load data
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df_train = pd.read_csv("./data/Training_preprocessed.csv")
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return classifier, circuit
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def get_user_vect_symptoms_from_checkboxgroup(*user_symptoms) -> np.array:
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symptoms_vector = {key: 0 for key in VALID_COLUMNS}
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for symptom_box in user_symptoms:
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for pretty_symptom in symptom_box:
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return user_symptoms_vect
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def get_user_vector_from_default_disease(disease):
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user_symptom_vector = df_test[df_test["prognosis"] == disease].iloc[0].values
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return pretty_print(columns_with_1)
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def get_user_symptoms_vector_fn(selected_default_disease, *selected_symptoms):
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# Display an error box, if:
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# 1. The user has already selected a default disease and added more symptoms, or
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# 2. The the user has not selected a default disease or symptoms
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if (
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any(lst for lst in selected_symptoms if lst)
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and (selected_default_disease is not None and len(selected_default_disease) > 0)
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and set(pretty_print(selected_symptoms))
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- set(get_user_symptoms_from_default_disease(selected_default_disease))
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) or (
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not any(lst for lst in selected_symptoms if lst)
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and (
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selected_default_disease is None
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or (selected_default_disease is not None and len(selected_default_disease) < 1)
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)
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):
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return {
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error_box_1: gr.update(
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visible=True, value="Enter a default disease or select your own symptoms"
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),
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}
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# Case 1: The user has checked his own symptoms
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if any(lst for lst in selected_symptoms if lst):
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return {
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error_box_1: gr.update(visible=False),
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user_vector_textbox: get_user_vect_symptoms_from_checkboxgroup(*selected_symptoms),
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}
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133 |
# Case 2: The user has selected a default disease
|
134 |
if selected_default_disease is not None and len(selected_default_disease) > 0:
|
135 |
return {
|
136 |
+
user_vector_textbox: get_user_vector_from_default_disease(selected_default_disease),
|
137 |
+
error_box_1: gr.update(visible=False),
|
|
|
|
|
138 |
**{
|
139 |
box: get_user_symptoms_from_default_disease(selected_default_disease)
|
140 |
for box in check_boxes
|
|
|
142 |
}
|
143 |
|
144 |
|
145 |
+
def key_gen_fn(user_symptoms):
|
146 |
+
|
147 |
+
print("Cleaning directory ...")
|
148 |
+
clean_directory()
|
149 |
+
|
150 |
+
if user_symptoms is None or (user_symptoms is not None and len(user_symptoms) < 1):
|
151 |
+
print("Please submit your symptoms first")
|
152 |
+
return {
|
153 |
+
error_box_2: gr.update(visible=True, value="Please submit your symptoms first"),
|
154 |
+
}
|
155 |
+
|
156 |
+
# Key serialization
|
157 |
+
user_id = np.random.randint(0, 2**32)
|
158 |
+
|
159 |
+
client = FHEModelClient(path_dir=MODEL_PATH, key_dir=KEYS_PATH / f"{user_id}")
|
160 |
+
client.load()
|
161 |
+
|
162 |
+
# The client first need to create the private and evaluation keys.
|
163 |
+
|
164 |
+
client.generate_private_and_evaluation_keys()
|
165 |
+
|
166 |
+
# Get the serialized evaluation keys
|
167 |
+
serialized_evaluation_keys = client.get_serialized_evaluation_keys()
|
168 |
+
assert isinstance(serialized_evaluation_keys, bytes)
|
169 |
+
|
170 |
+
# np.save(f".fhe_keys/{user_id}/eval_key.npy", serialized_evaluation_keys)
|
171 |
+
evaluation_key_path = KEYS_PATH / f"{user_id}/evaluation_key"
|
172 |
+
with evaluation_key_path.open("wb") as evaluation_key_file:
|
173 |
+
evaluation_key_file.write(serialized_evaluation_keys)
|
174 |
+
|
175 |
+
serialized_evaluation_keys_shorten_hex = serialized_evaluation_keys.hex()[:INPUT_BROWSER_LIMIT]
|
176 |
+
|
177 |
+
return {
|
178 |
+
error_box_2: gr.update(visible=False),
|
179 |
+
eval_key_textbox: serialized_evaluation_keys_shorten_hex,
|
180 |
+
user_id_textbox: user_id,
|
181 |
+
eval_key_len_textbox: f"{len(serialized_evaluation_keys) / (10**6):.2f} MB",
|
182 |
+
}
|
183 |
+
|
184 |
+
|
185 |
+
def encrypt_fn(user_symptoms, user_id):
|
186 |
+
|
187 |
+
if not user_symptoms or not user_symptoms:
|
188 |
+
return {
|
189 |
+
error_box_3: gr.update(
|
190 |
+
visible=True, value="Please ensure that the evaluation key has been generated!"
|
191 |
+
)
|
192 |
+
}
|
193 |
+
|
194 |
+
# Retrieve the client API
|
195 |
+
|
196 |
+
client = FHEModelClient(path_dir=MODEL_PATH, key_dir=KEYS_PATH / f"{user_id}")
|
197 |
+
client.load()
|
198 |
+
|
199 |
+
user_symptoms = np.fromstring(user_symptoms[2:-2], dtype=int, sep=".").reshape(1, -1)
|
200 |
+
|
201 |
+
quant_user_symptoms = client.model.quantize_input(user_symptoms)
|
202 |
+
encrypted_quantized_user_symptoms = client.quantize_encrypt_serialize(user_symptoms)
|
203 |
+
|
204 |
+
encrypted_input_path = KEYS_PATH / f"{user_id}/encrypted_symptoms"
|
205 |
+
|
206 |
+
with encrypted_input_path.open("wb") as f:
|
207 |
+
f.write(encrypted_quantized_user_symptoms)
|
208 |
+
|
209 |
+
# print(client.model.predict(vect_x, fhe="simulate"), client.model.predict(vect_x, fhe="execute"))
|
210 |
+
# pred_s = client.model.fhe_circuit.simulate(quant_vect)
|
211 |
+
# pred_fhe = client.model.fhe_circuit.encrypt_run_decrypt(quant_vect) #
|
212 |
+
# non alpha -> \X1124, base64 ou en exa
|
213 |
+
|
214 |
+
# Compute size
|
215 |
+
|
216 |
+
# np.save(f".fhe_keys/{user_id}/encrypted_quant_vect.npy", encrypted_quantized_user_symptoms)
|
217 |
+
|
218 |
+
encrypted_quantized_user_symptoms_shorten_hex = encrypted_quantized_user_symptoms.hex()[
|
219 |
+
:INPUT_BROWSER_LIMIT
|
220 |
+
]
|
221 |
+
|
222 |
+
return {
|
223 |
+
error_box_3: gr.update(visible=False),
|
224 |
+
vect_textbox: user_symptoms,
|
225 |
+
quant_vect_textbox: quant_user_symptoms,
|
226 |
+
encrypted_vect_textbox: encrypted_quantized_user_symptoms_shorten_hex,
|
227 |
+
}
|
228 |
+
|
229 |
+
|
230 |
+
# def send_input(user_id, user_symptoms):
|
231 |
+
# """Send the encrypted input image as well as the evaluation key to the server.
|
232 |
+
|
233 |
+
# Args:
|
234 |
+
# user_id (int): The current user's ID.
|
235 |
+
# filter_name (str): The current filter to consider.
|
236 |
+
# """
|
237 |
+
# # Get the evaluation key path
|
238 |
+
|
239 |
+
|
240 |
+
# evaluation_key_path = get_client_file_path("evaluation_key", user_id, filter_name)
|
241 |
+
|
242 |
+
# if user_id == "" or not evaluation_key_path.is_file():
|
243 |
+
# raise gr.Error("Please generate the private key first.")
|
244 |
+
|
245 |
+
# encrypted_input_path = get_client_file_path("encrypted_image", user_id, filter_name)
|
246 |
+
# encrypted_symptoms_path = KEYS_PATH / f"{user_id}" / "encrypted_symtoms"
|
247 |
+
|
248 |
+
# if not encrypted_input_path.is_file():
|
249 |
+
# raise gr.Error("Please generate the private key and then encrypt an image first.")
|
250 |
+
|
251 |
+
# # Define the data and files to post
|
252 |
+
# data = {
|
253 |
+
# "user_id": user_id,
|
254 |
+
# "filter": filter_name,
|
255 |
+
# }
|
256 |
+
|
257 |
+
# files = [
|
258 |
+
# ("files", open(encrypted_input_path, "rb")),
|
259 |
+
# ("files", open(evaluation_key_path, "rb")),
|
260 |
+
# ]
|
261 |
+
|
262 |
+
# # Send the encrypted input image and evaluation key to the server
|
263 |
+
# url = SERVER_URL + "send_input"
|
264 |
+
# with requests.post(
|
265 |
+
# url=url,
|
266 |
+
# data=data,
|
267 |
+
# files=files,
|
268 |
+
# ) as response:
|
269 |
+
# return response.ok
|
270 |
+
|
271 |
+
|
272 |
+
# def decrypt_prediction(encrypted_quantized_vect, user_id):
|
273 |
+
# fhe_api = FHEModelClient(path_dir=REPO_DIR, key_dir=f".fhe_keys/{user_id}")
|
274 |
+
# fhe_api.load()
|
275 |
+
# fhe_api.generate_private_and_evaluation_keys(force=False)
|
276 |
+
# predictions = fhe_api.deserialize_decrypt_dequantize(encrypted_quantized_vect)
|
277 |
+
# return predictions
|
278 |
+
|
279 |
+
|
280 |
+
|
281 |
+
|
282 |
def clear_all_btn():
|
283 |
return {
|
284 |
+
box_default: None,
|
285 |
user_id_textbox: None,
|
286 |
eval_key_textbox: None,
|
287 |
+
quant_vect_textbox: None,
|
288 |
user_vector_textbox: None,
|
289 |
+
eval_key_len_textbox: None,
|
290 |
+
encrypted_vect_textbox: None,
|
291 |
+
error_box_1: gr.update(visible=False),
|
292 |
+
error_box_2: gr.update(visible=False),
|
293 |
+
error_box_3: gr.update(visible=False),
|
294 |
**{box: None for box in check_boxes},
|
295 |
}
|
296 |
|
297 |
|
298 |
if __name__ == "__main__":
|
299 |
print("Starting demo ...")
|
300 |
+
|
301 |
|
302 |
(df_train, X_train, X_test), (df_test, y_train, y_test) = load_data()
|
303 |
|
304 |
+
VALID_COLUMNS = X_train.columns.to_list()
|
305 |
|
306 |
# Load the model
|
307 |
with open("ConcreteXGBoostClassifier.pkl", "r", encoding="utf-8") as file:
|
|
|
358 |
)
|
359 |
check_boxes.append(check_box)
|
360 |
|
361 |
+
error_box_1 = gr.Textbox(label="Error", visible=False)
|
362 |
+
|
363 |
# User symptom vector
|
364 |
with gr.Row():
|
365 |
user_vector_textbox = gr.Textbox(
|
|
|
367 |
interactive=False,
|
368 |
max_lines=100,
|
369 |
)
|
|
|
370 |
|
371 |
with gr.Row():
|
372 |
# Submit botton
|
|
|
374 |
submit_button = gr.Button("Submit")
|
375 |
# Clear botton
|
376 |
with gr.Column():
|
377 |
+
clear_button = gr.Button("Clear")
|
378 |
|
379 |
# Click submit botton
|
380 |
|
381 |
submit_button.click(
|
382 |
+
fn=get_user_symptoms_vector_fn,
|
383 |
inputs=[box_default, *check_boxes],
|
384 |
+
outputs=[user_vector_textbox, error_box_1, *check_boxes],
|
385 |
)
|
386 |
|
387 |
gr.Markdown("# Step 2: Generate the keys")
|
388 |
gr.Markdown("Client side")
|
389 |
|
390 |
+
gen_key_btn = gr.Button("Generate the keys and send public part to server")
|
391 |
+
|
392 |
+
error_box_2 = gr.Textbox(label="Error", visible=False)
|
393 |
|
394 |
with gr.Row():
|
395 |
# User ID
|
|
|
414 |
interactive=False,
|
415 |
)
|
416 |
|
417 |
+
gen_key_btn.click(
|
418 |
+
key_gen_fn,
|
419 |
+
inputs=user_vector_textbox,
|
420 |
+
outputs=[eval_key_textbox, user_id_textbox, eval_key_len_textbox, error_box_2],
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
421 |
)
|
422 |
|
423 |
gr.Markdown("# Step 3: Encode the message with the private key")
|
424 |
gr.Markdown("Client side")
|
425 |
|
426 |
+
encrypt_btn = gr.Button("Encode the message with the private key and send it to the server")
|
427 |
+
|
428 |
+
error_box_3 = gr.Textbox(label="Error", visible=False)
|
429 |
|
430 |
with gr.Row():
|
431 |
|
|
|
446 |
label="Encrypted vector:", max_lines=4, interactive=False
|
447 |
)
|
448 |
|
449 |
+
encrypt_btn.click(
|
450 |
+
encrypt_fn,
|
451 |
inputs=[user_vector_textbox, user_id_textbox],
|
452 |
+
outputs=[vect_textbox, quant_vect_textbox, encrypted_vect_textbox, error_box_3],
|
453 |
)
|
454 |
|
455 |
gr.Markdown("# Step 4: Run the FHE evaluation")
|
|
|
465 |
label="Encrypted vector:", max_lines=4, interactive=False
|
466 |
)
|
467 |
|
468 |
+
# decrypt_target_botton.click(
|
469 |
+
# decrypt_prediction,
|
470 |
+
# inputs=[encrypted_vect_textbox, user_id_textbox],
|
471 |
+
# outputs=[decrypt_target_textbox],
|
472 |
+
# )
|
473 |
+
|
474 |
+
clear_button.click(
|
475 |
+
clear_all_btn,
|
476 |
+
outputs=[
|
477 |
+
box_default,
|
478 |
+
error_box_1,
|
479 |
+
error_box_2,
|
480 |
+
error_box_3,
|
481 |
+
user_id_textbox,
|
482 |
+
eval_key_textbox,
|
483 |
+
quant_vect_textbox,
|
484 |
+
user_vector_textbox,
|
485 |
+
eval_key_len_textbox,
|
486 |
+
encrypted_vect_textbox,
|
487 |
+
*check_boxes,
|
488 |
+
],
|
489 |
)
|
490 |
|
491 |
demo.launch()
|