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{ | |
"config":{ | |
"model":"zhihan1996/DNABERT-2-117M", | |
"model_args":"pretrained=zhihan1996/DNABERT-2-117M,revision=main,dtype=bfloat16", | |
"num_fewshot":0, | |
"batch_size":1, | |
"batch_sizes":[ | |
], | |
"device":"cpu", | |
"no_cache":true, | |
"limit":20, | |
"bootstrap_iters":100000, | |
"description_dict":{"Tokenization":"BPE", "# of Params":"117M", "Pretraining Data":"32.49B Tokens", "Species":"Human + 135 Species", "Nucleic Acid":"DNA"}, | |
"model_dtype":"bfloat16", | |
"model_name":"zhihan1996/DNABERT-2-117M", | |
"model_sha":"main" | |
}, | |
"results":{ | |
"PolyA":{ | |
"F1":0.4135 | |
}, | |
"LncRNA":{ | |
"F1":0.7255 | |
}, | |
"Chrom Acc":{ | |
"F1":0.6149 | |
}, | |
"Prom Str":{ | |
"RMSE":0.99 | |
}, | |
"Term Str":{ | |
"RMSE":0.24 | |
}, | |
"Splice":{ | |
"F1":0.4534 | |
}, | |
"Gene Exp":{ | |
"RMSE":14.78 | |
}, | |
"Enhancer":{ | |
"F1":0.3640 | |
} | |
} | |
} |