Spaces:
Sleeping
Sleeping
Upload predict.py
Browse files- predict.py +108 -0
predict.py
ADDED
@@ -0,0 +1,108 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
import streamlit as st
|
2 |
+
import pandas as pd
|
3 |
+
import requests
|
4 |
+
import os
|
5 |
+
from io import StringIO
|
6 |
+
import datetime
|
7 |
+
|
8 |
+
# Set page configuration
|
9 |
+
st.set_page_config(page_title="Predict", page_icon="🔮", layout="wide")
|
10 |
+
|
11 |
+
|
12 |
+
st.title("Predict Sepsis")
|
13 |
+
|
14 |
+
|
15 |
+
def select_model():
|
16 |
+
col1, col2 = st.columns(2)
|
17 |
+
with col1:
|
18 |
+
choice = st.selectbox('Select a model', options=['xgboost', 'random_forest'], key='select_model')
|
19 |
+
with col2:
|
20 |
+
pass
|
21 |
+
|
22 |
+
# if st.session_state['selected_model'] == 'Xgboost':
|
23 |
+
# pipeline = xgboost_pipeline()
|
24 |
+
# else:
|
25 |
+
# pipeline = load_random_forest_pipeline()
|
26 |
+
|
27 |
+
# encoder = joblib.load('models/encoder.joblib')
|
28 |
+
return choice
|
29 |
+
|
30 |
+
|
31 |
+
def make_prediction():
|
32 |
+
selected_model = st.session_state['select_model']
|
33 |
+
age = st.session_state['age']
|
34 |
+
insurance = 1 if st.session_state['insurance'] == 'Yes' else 0
|
35 |
+
m11 = st.session_state['m11']
|
36 |
+
pr = st.session_state['pr']
|
37 |
+
prg = st.session_state['prg']
|
38 |
+
ts = st.session_state['ts']
|
39 |
+
pl = st.session_state['pl']
|
40 |
+
sk = st.session_state['sk']
|
41 |
+
bd2 = st.session_state['bd2']
|
42 |
+
|
43 |
+
base_url = 'https://gabcares-team-curium.hf.space/'
|
44 |
+
url = base_url + f"{ 'xgboost_prediction' if selected_model=='xgboost' else 'random_forest_prediction'}"
|
45 |
+
|
46 |
+
|
47 |
+
data = {'PRG': prg, 'PL': pl, 'PR': pr,'SK': sk, 'TS': ts, 'M11': m11, 'BD2': bd2, 'Age': age, 'Insurance': insurance}
|
48 |
+
# Send POST request with JSON data using the json parameter
|
49 |
+
response_status = requests.get(base_url)
|
50 |
+
|
51 |
+
if (response_status.status_code == 200):
|
52 |
+
response = requests.post(url, json=data,timeout=30)
|
53 |
+
pred_prob = (response.json()['result'])
|
54 |
+
prediction = pred_prob['prediction']
|
55 |
+
probability = pred_prob['probability']
|
56 |
+
|
57 |
+
st.session_state['prediction'] = prediction
|
58 |
+
st.session_state['probability'] = probability
|
59 |
+
else:
|
60 |
+
st.write('Unable to connect to the server.')
|
61 |
+
|
62 |
+
|
63 |
+
# Creating the form
|
64 |
+
def display_form():
|
65 |
+
select_model()
|
66 |
+
|
67 |
+
with st.form('input_features'):
|
68 |
+
|
69 |
+
col1, col2 = st.columns(2)
|
70 |
+
with col1:
|
71 |
+
st.write('### Patient Demographics')
|
72 |
+
age = st.number_input('Age', min_value=0, max_value=100, step=1, key = 'age')
|
73 |
+
insurance = st.selectbox('Insurance', options = ['Yes', 'No'], key = 'insurance')
|
74 |
+
|
75 |
+
st.write('### Vital Signs')
|
76 |
+
m11 = st.number_input('BMI', min_value=10.0, format="%.2f",step = 1.00, key = 'm11')
|
77 |
+
pr = st.number_input('Blood Pressure', min_value=10.0, format="%.2f",step = 1.00, key = 'pr')
|
78 |
+
prg = st.number_input('PRG(plasma glucose)', min_value=10.0, format="%.2f",step = 1.00, key = 'prg')
|
79 |
+
|
80 |
+
with col2:
|
81 |
+
st.write('### Blood Work')
|
82 |
+
pl = st.number_input('PL(Blood Work Result 1)', min_value=10.0, format="%.2f",step = 1.00, key = 'pl')
|
83 |
+
sk = st.number_input('SK(Blood Work Result 2)', min_value=10.0, format="%.2f",step = 1.00, key = 'sk')
|
84 |
+
ts = st.number_input('TS(Blood Work Result 3)', min_value=10.0, format="%.2f",step = 1.00, key = 'ts')
|
85 |
+
bd2 = st.number_input('BD2(Blood Work Result 4)', min_value=10.0, format="%.2f",step = 1.00, key = 'bd2')
|
86 |
+
|
87 |
+
st.form_submit_button('Submit', on_click=make_prediction)
|
88 |
+
|
89 |
+
|
90 |
+
if __name__ == '__main__':
|
91 |
+
|
92 |
+
display_form()
|
93 |
+
|
94 |
+
final_prediction = st.session_state.get('prediction')
|
95 |
+
final_probability = st.session_state.get('probability')
|
96 |
+
|
97 |
+
if final_prediction is None:
|
98 |
+
st.write('Predictions show here!')
|
99 |
+
st.divider()
|
100 |
+
else:
|
101 |
+
if final_prediction.lower() == 'positive':
|
102 |
+
st.markdown(f'### Patient is likely to develop sepsis😞.')
|
103 |
+
st.markdown(f'## Probability: {final_probability:.2f}%')
|
104 |
+
|
105 |
+
else:
|
106 |
+
# st.markdown(f'## Sepsis: {final_prediction}')
|
107 |
+
st.markdown(f'### Patient is unlikely to develop sepsis😊.')
|
108 |
+
st.markdown(f'## Probability: {final_probability:.2f}%')
|