Joshua Kravitz
Initial commit
e284167
{
"task": {
"id": "bacarch_bigene",
"display_name": "BacArch BiGene",
"description": "Evaluate on BacArch bigene matching task between bacterial (E.coli K-12) proteins and archaeal (Sulfolobus acidocaldarius DSM 639) proteins.",
"modality": "protein",
"type": "bigene_mining",
"datasets": [
{
"path": "tattabio/bac_arch_bigene",
"revision": "d5a65e44bae43a9ba9f2fdc03056dff9c12f6631"
}
],
"primary_metric_id": "f1"
},
"model": {
"hf_name": "hugohrban/progen2-small",
"revision": "...",
"num_layers": 12,
"num_params": 151148576,
"embed_dim": 1024
},
"dgeb_version": "0.0.0",
"results": [
{
"layer_number": 6,
"layer_display_name": "6",
"metrics": [
{
"id": "precision",
"display_name": "precision",
"description": null,
"value": 0.5480188679245283
},
{
"id": "recall",
"display_name": "recall",
"description": null,
"value": 0.6264150943396226
},
{
"id": "f1",
"display_name": "f1",
"description": null,
"value": 0.5690179422254895
},
{
"id": "accuracy",
"display_name": "accuracy",
"description": null,
"value": 0.6264150943396226
}
]
},
{
"layer_number": 11,
"layer_display_name": "11",
"metrics": [
{
"id": "precision",
"display_name": "precision",
"description": null,
"value": 0.5530817610062893
},
{
"id": "recall",
"display_name": "recall",
"description": null,
"value": 0.6415094339622641
},
{
"id": "f1",
"display_name": "f1",
"description": null,
"value": 0.5791194968553458
},
{
"id": "accuracy",
"display_name": "accuracy",
"description": null,
"value": 0.6415094339622641
}
]
}
]
}