Joshua Kravitz
Initial commit
e284167
{
"task": {
"id": "bacarch_bigene",
"display_name": "BacArch BiGene",
"description": "Evaluate on BacArch bigene matching task between bacterial (E.coli K-12) proteins and archaeal (Sulfolobus acidocaldarius DSM 639) proteins.",
"modality": "protein",
"type": "bigene_mining",
"datasets": [
{
"path": "tattabio/bac_arch_bigene",
"revision": "d5a65e44bae43a9ba9f2fdc03056dff9c12f6631"
}
],
"primary_metric_id": "f1"
},
"model": {
"hf_name": "hugohrban/progen2-large",
"revision": "...",
"num_layers": 32,
"num_params": 2779356160,
"embed_dim": 2560
},
"dgeb_version": "0.0.0",
"results": [
{
"layer_number": 16,
"layer_display_name": "16",
"metrics": [
{
"id": "precision",
"display_name": "precision",
"description": null,
"value": 0.5524985706117781
},
{
"id": "recall",
"display_name": "recall",
"description": null,
"value": 0.6339622641509434
},
{
"id": "f1",
"display_name": "f1",
"description": null,
"value": 0.5746138521035977
},
{
"id": "accuracy",
"display_name": "accuracy",
"description": null,
"value": 0.6339622641509434
}
]
},
{
"layer_number": 31,
"layer_display_name": "31",
"metrics": [
{
"id": "precision",
"display_name": "precision",
"description": null,
"value": 0.17530030765879823
},
{
"id": "recall",
"display_name": "recall",
"description": null,
"value": 0.22641509433962265
},
{
"id": "f1",
"display_name": "f1",
"description": null,
"value": 0.18399742288681928
},
{
"id": "accuracy",
"display_name": "accuracy",
"description": null,
"value": 0.22641509433962265
}
]
}
]
}