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/nucleotide-transformer-v2-50m-multi-species
/rpob_bac_dna_phylogeny.json
{ | |
"task": { | |
"id": "rpob_bac_dna_phylogeny", | |
"display_name": "RpoB Bacterial Phylogeny", | |
"description": "Evaluate on RpoB phylogeny distance correlation task for Bacterial DNA sequences.", | |
"modality": "dna", | |
"type": "eds", | |
"datasets": [ | |
{ | |
"path": "tattabio/rpob_bac_dna_phylogeny_sequences", | |
"revision": "8e137d3fb8886d8739ce08d1918745444c7d30d6" | |
}, | |
{ | |
"path": "tattabio/rpob_bac_dna_phylogeny_distances", | |
"revision": "67339e271b2a1602208153d53d70d35ba6fa8876" | |
} | |
], | |
"primary_metric_id": "top_corr" | |
}, | |
"model": { | |
"hf_name": "InstaDeepAI/nucleotide-transformer-v2-50m-multi-species", | |
"revision": "...", | |
"num_layers": 12, | |
"num_params": 55904972, | |
"embed_dim": 512 | |
}, | |
"dgeb_version": "0.0.0", | |
"results": [ | |
{ | |
"layer_number": 6, | |
"layer_display_name": "6", | |
"metrics": [ | |
{ | |
"id": "cos_sim", | |
"display_name": "cos_sim", | |
"description": null, | |
"value": 0.07434903594716476 | |
}, | |
{ | |
"id": "manhattan", | |
"display_name": "manhattan", | |
"description": null, | |
"value": 0.08977856846092792 | |
}, | |
{ | |
"id": "euclidean", | |
"display_name": "euclidean", | |
"description": null, | |
"value": 0.09222560782823379 | |
}, | |
{ | |
"id": "top_corr", | |
"display_name": "top_corr", | |
"description": null, | |
"value": 0.09222560782823379 | |
} | |
] | |
}, | |
{ | |
"layer_number": 11, | |
"layer_display_name": "11", | |
"metrics": [ | |
{ | |
"id": "cos_sim", | |
"display_name": "cos_sim", | |
"description": null, | |
"value": 0.08630281284059531 | |
}, | |
{ | |
"id": "manhattan", | |
"display_name": "manhattan", | |
"description": null, | |
"value": 0.09701233167900071 | |
}, | |
{ | |
"id": "euclidean", | |
"display_name": "euclidean", | |
"description": null, | |
"value": 0.09964321196343817 | |
}, | |
{ | |
"id": "top_corr", | |
"display_name": "top_corr", | |
"description": null, | |
"value": 0.09964321196343817 | |
} | |
] | |
} | |
] | |
} | |