Joshua Kravitz
Initial commit
e284167
{
"task": {
"id": "rpob_bac_dna_phylogeny",
"display_name": "RpoB Bacterial Phylogeny",
"description": "Evaluate on RpoB phylogeny distance correlation task for Bacterial DNA sequences.",
"modality": "dna",
"type": "eds",
"datasets": [
{
"path": "tattabio/rpob_bac_dna_phylogeny_sequences",
"revision": "8e137d3fb8886d8739ce08d1918745444c7d30d6"
},
{
"path": "tattabio/rpob_bac_dna_phylogeny_distances",
"revision": "67339e271b2a1602208153d53d70d35ba6fa8876"
}
],
"primary_metric_id": "top_corr"
},
"model": {
"hf_name": "InstaDeepAI/nucleotide-transformer-v2-500m-multi-species",
"revision": "...",
"num_layers": 29,
"num_params": 498345436,
"embed_dim": 1024
},
"dgeb_version": "0.0.0",
"results": [
{
"layer_number": 14,
"layer_display_name": "14",
"metrics": [
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"value": 0.05135094895715095
},
{
"id": "manhattan",
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"value": 0.07685936603629384
},
{
"id": "euclidean",
"display_name": "euclidean",
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"value": 0.08785540391133782
},
{
"id": "top_corr",
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}
]
},
{
"layer_number": 28,
"layer_display_name": "28",
"metrics": [
{
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"description": null,
"value": 0.10564977401255361
},
{
"id": "manhattan",
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"value": 0.10576727586891548
},
{
"id": "euclidean",
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},
{
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}
]
}
]
}